RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 CSRNP1Q96S65 589 aa22.73■■□□□ 1.23
RNF4-204ENST00000503659 PNMA6EA0A0J9YXQ4 647 aa22.72■■□□□ 1.23
RNF4-204ENST00000503659 CRKP46108 304 aa22.72■■□□□ 1.23
RNF4-204ENST00000503659 PPP2R3BQ9Y5P8 575 aa22.72■■□□□ 1.23
RNF4-204ENST00000503659 AKAP11Q9UKA4 1901 aa22.72■■□□□ 1.23
RNF4-204ENST00000503659 UBE2Q2LH0YL09 131 aa22.71■■□□□ 1.23
RNF4-204ENST00000503659 TTLL12Q14166 644 aaPredicted RBP22.71■■□□□ 1.23
RNF4-204ENST00000503659 SPDYE2Q495Y8 402 aa22.71■■□□□ 1.23
RNF4-204ENST00000503659 ARMC9Q7Z3E5 817 aa22.71■■□□□ 1.23
RNF4-204ENST00000503659 VEZTQ9HBM0 779 aa22.71■■□□□ 1.23
RNF4-204ENST00000503659 RNF186Q9NXI6 227 aa22.71■■□□□ 1.23
RNF4-204ENST00000503659 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.71■■□□□ 1.23
RNF4-204ENST00000503659 CASP8AP2Q9UKL3 1982 aa22.7■■□□□ 1.23
RNF4-204ENST00000503659 ADORA1P30542 326 aa22.7■■□□□ 1.22
RNF4-204ENST00000503659 FTSJ3Q8IY81 847 aaKnown RBP22.7■■□□□ 1.22
RNF4-204ENST00000503659 DZIP1LQ8IYY4 767 aaKnown RBP22.7■■□□□ 1.22
RNF4-204ENST00000503659 TDRD3Q9H7E2 651 aaKnown RBP22.7■■□□□ 1.22
RNF4-204ENST00000503659 ZNF70Q9UC06 446 aaPredicted RBP22.7■■□□□ 1.22
RNF4-204ENST00000503659 OTOFQ9HC10 1997 aa22.69■■□□□ 1.22
RNF4-204ENST00000503659 PHKA1P46020 1223 aa22.69■■□□□ 1.22
RNF4-204ENST00000503659 HDLBPQ00341 1268 aaKnown RBP22.69■■□□□ 1.22
RNF4-204ENST00000503659 FZD1Q9UP38 647 aa22.69■■□□□ 1.22
RNF4-204ENST00000503659 LAMB1P07942 1786 aa22.68■■□□□ 1.22
RNF4-204ENST00000503659 TRPA1O75762 1119 aa22.68■■□□□ 1.22
RNF4-204ENST00000503659 TFCP2Q12800 502 aa22.68■■□□□ 1.22
RNF4-204ENST00000503659 SUGT1Q9Y2Z0 365 aa22.68■■□□□ 1.22
RNF4-204ENST00000503659 TIMM10P62072 90 aa22.67■■□□□ 1.22
RNF4-204ENST00000503659 PRKG1Q13976 671 aa22.67■■□□□ 1.22
RNF4-204ENST00000503659 RASA3Q14644 834 aa22.67■■□□□ 1.22
RNF4-204ENST00000503659 ITPRIPQ8IWB1 547 aa22.67■■□□□ 1.22
RNF4-204ENST00000503659 WDR66Q8TBY9 1149 aa22.67■■□□□ 1.22
RNF4-204ENST00000503659 TEKT1Q969V4 418 aa22.67■■□□□ 1.22
RNF4-204ENST00000503659 MAST3O60307 1309 aa22.66■■□□□ 1.22
RNF4-204ENST00000503659 UNCXA6NJT0 531 aa22.66■■□□□ 1.22
RNF4-204ENST00000503659 ZBTB7BO15156 539 aaPredicted RBP22.66■■□□□ 1.22
RNF4-204ENST00000503659 ZBTB22O15209 634 aa22.66■■□□□ 1.22
RNF4-204ENST00000503659 MAP3K11Q16584 847 aa22.66■■□□□ 1.22
RNF4-204ENST00000503659 LDLRAD1Q5T700 205 aa22.66■■□□□ 1.22
RNF4-204ENST00000503659 CCDC102BQ68D86 513 aa22.66■■□□□ 1.22
RNF4-204ENST00000503659 ZDHHC15Q96MV8 337 aa22.66■■□□□ 1.22
RNF4-204ENST00000503659 MRIQ9BWK5 157 aa22.66■■□□□ 1.22
RNF4-204ENST00000503659 MCOLN1Q9GZU1 580 aa22.66■■□□□ 1.22
RNF4-204ENST00000503659 C1orf115Q9H7X2 142 aa22.66■■□□□ 1.22
RNF4-204ENST00000503659 A0A1B0GUL7 405 aa22.65■■□□□ 1.22
RNF4-204ENST00000503659 PPP1R12BO60237 982 aaPredicted RBP22.65■■□□□ 1.22
RNF4-204ENST00000503659 POLA2Q14181 598 aa22.65■■□□□ 1.22
RNF4-204ENST00000503659 SUPT20HL1Q3ZLR7 823 aa22.65■■□□□ 1.22
RNF4-204ENST00000503659 NBPF12Q5TAG4 269 aaPredicted RBP22.65■■□□□ 1.22
RNF4-204ENST00000503659 GNL3LQ9NVN8 582 aaKnown RBP22.65■■□□□ 1.22
RNF4-204ENST00000503659 ANGEL1Q9UNK9 670 aaKnown RBP22.65■■□□□ 1.22
RNF4-204ENST00000503659 SALL1Q9NSC2 1324 aa22.64■■□□□ 1.22
RNF4-204ENST00000503659 SEMA3EO15041 775 aa22.64■■□□□ 1.21
RNF4-204ENST00000503659 TM4SF4P48230 202 aa22.64■■□□□ 1.21
RNF4-204ENST00000503659 TNFAIP1Q13829 316 aa22.64■■□□□ 1.21
RNF4-204ENST00000503659 APOBEC3HQ6NTF7 200 aaKnown RBP22.64■■□□□ 1.21
RNF4-204ENST00000503659 CDAN1Q8IWY9 1227 aa22.64■■□□□ 1.21
RNF4-204ENST00000503659 TEPSINQ96N21 525 aa22.64■■□□□ 1.21
RNF4-204ENST00000503659 MYH2Q9UKX2 1941 aa22.63■■□□□ 1.21
RNF4-204ENST00000503659 TCP10L2B9ZVM9 353 aa22.63■■□□□ 1.21
RNF4-204ENST00000503659 PRDX5P30044 214 aa22.63■■□□□ 1.21
RNF4-204ENST00000503659 SREBF2Q12772 1141 aa22.63■■□□□ 1.21
RNF4-204ENST00000503659 DGKZQ13574 1117 aa22.63■■□□□ 1.21
RNF4-204ENST00000503659 HHIPL2Q6UWX4 724 aa22.63■■□□□ 1.21
RNF4-204ENST00000503659 PANK1Q8TE04 598 aa22.63■■□□□ 1.21
RNF4-204ENST00000503659 SSH3Q8TE77 659 aa22.63■■□□□ 1.21
RNF4-204ENST00000503659 XAGE2Q96GT9 111 aa22.63■■□□□ 1.21
RNF4-204ENST00000503659 DENND2AQ9ULE3 1009 aa22.63■■□□□ 1.21
RNF4-204ENST00000503659 AKAP2Q9Y2D5 859 aa22.63■■□□□ 1.21
RNF4-204ENST00000503659 CACNB3P54284 484 aa22.62■■□□□ 1.21
RNF4-204ENST00000503659 ATP8B2P98198 1209 aa22.62■■□□□ 1.21
RNF4-204ENST00000503659 RASGRF1Q13972 1273 aa22.62■■□□□ 1.21
RNF4-204ENST00000503659 TMEM39BQ9GZU3 492 aa22.61■■□□□ 1.21
RNF4-204ENST00000503659 PDS5AQ29RF7 1337 aaKnown RBP22.6■■□□□ 1.21
RNF4-204ENST00000503659 CCDC85CA6NKD9 419 aa22.6■■□□□ 1.21
RNF4-204ENST00000503659 G3BP1Q13283 466 aaKnown RBP eCLIP22.6■■□□□ 1.21
RNF4-204ENST00000503659 MVPQ14764 893 aaKnown RBP22.6■■□□□ 1.21
RNF4-204ENST00000503659 DIXDC1Q155Q3 683 aa22.6■■□□□ 1.21
RNF4-204ENST00000503659 NOM1Q5C9Z4 860 aaKnown RBP22.6■■□□□ 1.21
RNF4-204ENST00000503659 SPRYD7Q5W111 196 aa22.6■■□□□ 1.21
RNF4-204ENST00000503659 CLMNQ96JQ2 1002 aa22.6■■□□□ 1.21
RNF4-204ENST00000503659 USP2O75604 605 aaPredicted RBP22.59■■□□□ 1.21
RNF4-204ENST00000503659 LDHBP07195 334 aaKnown RBP22.59■■□□□ 1.21
RNF4-204ENST00000503659 TNNI2P48788 182 aa22.59■■□□□ 1.21
RNF4-204ENST00000503659 SLC10A4Q96EP9 437 aa22.59■■□□□ 1.21
RNF4-204ENST00000503659 DAGLAQ9Y4D2 1042 aa22.59■■□□□ 1.21
RNF4-204ENST00000503659 ZBTB48P10074 688 aaPredicted RBP22.58■■□□□ 1.21
RNF4-204ENST00000503659 IREB2P48200 963 aaKnown RBP22.58■■□□□ 1.21
RNF4-204ENST00000503659 INHBEP58166 350 aa22.58■■□□□ 1.21
RNF4-204ENST00000503659 MKRN3Q13064 507 aaKnown RBP22.58■■□□□ 1.21
RNF4-204ENST00000503659 NEUROD6Q96NK8 337 aa22.58■■□□□ 1.21
RNF4-204ENST00000503659 CFHR5Q9BXR6 569 aa22.58■■□□□ 1.21
RNF4-204ENST00000503659 FKBP1CQ5VVH2 108 aa22.57■■□□□ 1.2
RNF4-204ENST00000503659 RPAP1Q9BWH6 1393 aaPredicted RBP22.56■■□□□ 1.2
RNF4-204ENST00000503659 MANSC4A6NHS7 340 aaPredicted RBP22.56■■□□□ 1.2
RNF4-204ENST00000503659 ALDH1A1P00352 501 aa22.56■■□□□ 1.2
RNF4-204ENST00000503659 CEP85Q6P2H3 762 aa22.56■■□□□ 1.2
RNF4-204ENST00000503659 FAM83AQ86UY5 434 aa22.56■■□□□ 1.2
RNF4-204ENST00000503659 TMOD2Q9NZR1 351 aa22.56■■□□□ 1.2
RNF4-204ENST00000503659 RCAN3Q9UKA8 241 aa22.56■■□□□ 1.2
RNF4-204ENST00000503659 NOP58Q9Y2X3 529 aaKnown RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms