RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 HMG20BQ9P0W2 317 aa22.39■■□□□ 1.17
PDLIM7-209ENST00000503346 RBM5P52756 815 aaKnown RBP eCLIP22.38■■□□□ 1.17
PDLIM7-209ENST00000503346 CST9Q5W186 159 aa22.38■■□□□ 1.17
PDLIM7-209ENST00000503346 AACSQ86V21 672 aa22.38■■□□□ 1.17
PDLIM7-209ENST00000503346 CLASRPQ8N2M8 674 aaKnown RBP22.38■■□□□ 1.17
PDLIM7-209ENST00000503346 SPATA5Q8NB90 893 aa22.38■■□□□ 1.17
PDLIM7-209ENST00000503346 TLR7Q9NYK1 1049 aaKnown RBP22.38■■□□□ 1.17
PDLIM7-209ENST00000503346 APBB1O00213 710 aa22.37■■□□□ 1.17
PDLIM7-209ENST00000503346 MYO1BO43795 1136 aa22.37■■□□□ 1.17
PDLIM7-209ENST00000503346 LDHBP07195 334 aaKnown RBP22.37■■□□□ 1.17
PDLIM7-209ENST00000503346 PRDX5P30044 214 aa22.37■■□□□ 1.17
PDLIM7-209ENST00000503346 MCAMP43121 646 aa22.37■■□□□ 1.17
PDLIM7-209ENST00000503346 TTC39AQ5SRH9 613 aa22.37■■□□□ 1.17
PDLIM7-209ENST00000503346 APOBEC3FQ8IUX4 373 aaKnown RBP22.37■■□□□ 1.17
PDLIM7-209ENST00000503346 TEKT1Q969V4 418 aa22.37■■□□□ 1.17
PDLIM7-209ENST00000503346 DCTPP1Q9H773 170 aa22.37■■□□□ 1.17
PDLIM7-209ENST00000503346 CELF2O95319 508 aaKnown RBP22.36■■□□□ 1.17
PDLIM7-209ENST00000503346 HHIPL2Q6UWX4 724 aa22.36■■□□□ 1.17
PDLIM7-209ENST00000503346 DLK2Q6UY11 383 aa22.36■■□□□ 1.17
PDLIM7-209ENST00000503346 DNAJC5GQ8N7S2 189 aa22.36■■□□□ 1.17
PDLIM7-209ENST00000503346 ZDHHC15Q96MV8 337 aa22.36■■□□□ 1.17
PDLIM7-209ENST00000503346 AOX1Q06278 1338 aa22.35■■□□□ 1.17
PDLIM7-209ENST00000503346 PI16Q6UXB8 463 aa22.35■■□□□ 1.17
PDLIM7-209ENST00000503346 SPDYE2Q495Y8 402 aa22.34■■□□□ 1.17
PDLIM7-209ENST00000503346 SPTY2D1Q68D10 685 aaPredicted RBP22.34■■□□□ 1.17
PDLIM7-209ENST00000503346 CDCA5Q96FF9 252 aa22.34■■□□□ 1.17
PDLIM7-209ENST00000503346 LRRCC1Q9C099 1032 aa22.34■■□□□ 1.17
PDLIM7-209ENST00000503346 ABCF2Q9UG63 623 aa22.34■■□□□ 1.17
PDLIM7-209ENST00000503346 SCAF8Q9UPN6 1271 aaKnown RBP22.34■■□□□ 1.17
PDLIM7-209ENST00000503346 CLRN2A0PK11 232 aa22.33■■□□□ 1.17
PDLIM7-209ENST00000503346 APOBEC3HQ6NTF7 200 aaKnown RBP22.33■■□□□ 1.17
PDLIM7-209ENST00000503346 ZNF408Q9H9D4 720 aa22.33■■□□□ 1.17
PDLIM7-209ENST00000503346 CEP350Q5VT06 3117 aa22.33■■□□□ 1.16
PDLIM7-209ENST00000503346 MYH13Q9UKX3 1938 aa22.32■■□□□ 1.16
PDLIM7-209ENST00000503346 IFIT2P09913 472 aaKnown RBP22.32■■□□□ 1.16
PDLIM7-209ENST00000503346 TDRD3Q9H7E2 651 aaKnown RBP22.32■■□□□ 1.16
PDLIM7-209ENST00000503346 ZNF70Q9UC06 446 aaPredicted RBP22.32■■□□□ 1.16
PDLIM7-209ENST00000503346 DIXDC1Q155Q3 683 aa22.31■■□□□ 1.16
PDLIM7-209ENST00000503346 ERICH6Q7L0X2 663 aa22.31■■□□□ 1.16
PDLIM7-209ENST00000503346 DZIP1Q86YF9 867 aaKnown RBP22.31■■□□□ 1.16
PDLIM7-209ENST00000503346 EXOC6Q8TAG9 804 aa22.31■■□□□ 1.16
PDLIM7-209ENST00000503346 KLRG1Q96E93 195 aa22.31■■□□□ 1.16
PDLIM7-209ENST00000503346 DEFB129Q9H1M3 183 aa22.31■■□□□ 1.16
PDLIM7-209ENST00000503346 VEZTQ9HBM0 779 aa22.31■■□□□ 1.16
PDLIM7-209ENST00000503346 ABT1Q9ULW3 272 aaKnown RBP22.31■■□□□ 1.16
PDLIM7-209ENST00000503346 DAGLAQ9Y4D2 1042 aa22.31■■□□□ 1.16
PDLIM7-209ENST00000503346 PPP2R3BQ9Y5P8 575 aa22.31■■□□□ 1.16
PDLIM7-209ENST00000503346 TLL2Q9Y6L7 1015 aa22.31■■□□□ 1.16
PDLIM7-209ENST00000503346 RASSF10A6NK89 507 aa22.3■■□□□ 1.16
PDLIM7-209ENST00000503346 HDAC1Q13547 482 aaPredicted RBP22.3■■□□□ 1.16
PDLIM7-209ENST00000503346 TBC1D9Q6ZT07 1266 aa22.3■■□□□ 1.16
PDLIM7-209ENST00000503346 FAM163AQ96GL9 167 aaPredicted RBP22.3■■□□□ 1.16
PDLIM7-209ENST00000503346 SNRKQ9NRH2 765 aa22.3■■□□□ 1.16
PDLIM7-209ENST00000503346 GAKO14976 1311 aa22.3■■□□□ 1.16
PDLIM7-209ENST00000503346 CNTNAP1P78357 1384 aa22.29■■□□□ 1.16
PDLIM7-209ENST00000503346 CYP2E1P05181 493 aaPredicted RBP22.29■■□□□ 1.16
PDLIM7-209ENST00000503346 ZAP70P43403 619 aa22.29■■□□□ 1.16
PDLIM7-209ENST00000503346 TNFAIP1Q13829 316 aa22.29■■□□□ 1.16
PDLIM7-209ENST00000503346 PRAMEF18Q5VWM3 479 aa22.29■■□□□ 1.16
PDLIM7-209ENST00000503346 SAPCD2Q86UD0 394 aa22.29■■□□□ 1.16
PDLIM7-209ENST00000503346 SLF2Q8IX21 1173 aa22.29■■□□□ 1.16
PDLIM7-209ENST00000503346 GBA2Q9HCG7 927 aaPredicted RBP22.29■■□□□ 1.16
PDLIM7-209ENST00000503346 SMARCA5O60264 1052 aaPredicted RBP22.28■■□□□ 1.16
PDLIM7-209ENST00000503346 IGSF3O75054 1194 aa22.28■■□□□ 1.16
PDLIM7-209ENST00000503346 MECOMQ03112 1051 aa22.28■■□□□ 1.16
PDLIM7-209ENST00000503346 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.28■■□□□ 1.16
PDLIM7-209ENST00000503346 TRPM7Q96QT4 1865 aa22.28■■□□□ 1.16
PDLIM7-209ENST00000503346 POLR2AP24928 1970 aaKnown RBP22.27■■□□□ 1.16
PDLIM7-209ENST00000503346 DEFB115Q30KQ5 88 aa22.27■■□□□ 1.16
PDLIM7-209ENST00000503346 FKBP1CQ5VVH2 108 aa22.27■■□□□ 1.16
PDLIM7-209ENST00000503346 C2orf69Q8N8R5 385 aa22.27■■□□□ 1.16
PDLIM7-209ENST00000503346 ZNF384Q8TF68 577 aa22.27■■□□□ 1.16
PDLIM7-209ENST00000503346 NSUN4Q96CB9 384 aaKnown RBP22.27■■□□□ 1.16
PDLIM7-209ENST00000503346 HHIPL1Q96JK4 782 aa22.27■■□□□ 1.16
PDLIM7-209ENST00000503346 MKRN1Q9UHC7 482 aaKnown RBP22.27■■□□□ 1.16
PDLIM7-209ENST00000503346 FKBP1BP68106 108 aa22.26■■□□□ 1.15
PDLIM7-209ENST00000503346 GSTO1P78417 241 aa22.26■■□□□ 1.15
PDLIM7-209ENST00000503346 RASA3Q14644 834 aa22.26■■□□□ 1.15
PDLIM7-209ENST00000503346 TMOD2Q9NZR1 351 aa22.26■■□□□ 1.15
PDLIM7-209ENST00000503346 RAI14Q9P0K7 980 aa22.26■■□□□ 1.15
PDLIM7-209ENST00000503346 LRP2BPQ9P2M1 347 aa22.26■■□□□ 1.15
PDLIM7-209ENST00000503346 NF2P35240 595 aa22.25■■□□□ 1.15
PDLIM7-209ENST00000503346 TNNI2P48788 182 aa22.25■■□□□ 1.15
PDLIM7-209ENST00000503346 CDC42EP5Q6NZY7 148 aa22.25■■□□□ 1.15
PDLIM7-209ENST00000503346 BCL11AQ9H165 835 aa22.25■■□□□ 1.15
PDLIM7-209ENST00000503346 PIH1D3Q9NQM4 214 aaKnown RBP22.25■■□□□ 1.15
PDLIM7-209ENST00000503346 MROH7-TTC4A0A0A0MT08 1334 aa22.25■■□□□ 1.15
PDLIM7-209ENST00000503346 ECM29Q5VYK3 1845 aa22.24■■□□□ 1.15
PDLIM7-209ENST00000503346 TCP10L2B9ZVM9 353 aa22.24■■□□□ 1.15
PDLIM7-209ENST00000503346 LDHCP07864 332 aa22.24■■□□□ 1.15
PDLIM7-209ENST00000503346 FAM83AQ86UY5 434 aa22.24■■□□□ 1.15
PDLIM7-209ENST00000503346 GCC1Q96CN9 775 aa22.24■■□□□ 1.15
PDLIM7-209ENST00000503346 AKAP11Q9UKA4 1901 aa22.23■■□□□ 1.15
PDLIM7-209ENST00000503346 GPR75-ASB3A0A0A6YYF3 556 aa22.23■■□□□ 1.15
PDLIM7-209ENST00000503346 ATP5JP18859 108 aa22.23■■□□□ 1.15
PDLIM7-209ENST00000503346 CACNB3P54284 484 aa22.23■■□□□ 1.15
PDLIM7-209ENST00000503346 HUNKP57058 714 aa22.23■■□□□ 1.15
PDLIM7-209ENST00000503346 JMYQ8N9B5 988 aa22.23■■□□□ 1.15
PDLIM7-209ENST00000503346 USP40Q9NVE5 1235 aa22.23■■□□□ 1.15
PDLIM7-209ENST00000503346 BTDP43251 543 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms