RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 TCP10L2B9ZVM9 353 aa20.29■□□□□ 0.84
SCLT1-204ENST00000503215 USP2O75604 605 aaPredicted RBP20.29■□□□□ 0.84
SCLT1-204ENST00000503215 TBC1D8O95759 1140 aa20.29■□□□□ 0.84
SCLT1-204ENST00000503215 SLC5A1P13866 664 aa20.29■□□□□ 0.84
SCLT1-204ENST00000503215 TRIM27P14373 513 aa20.29■□□□□ 0.84
SCLT1-204ENST00000503215 CACNB3P54284 484 aa20.29■□□□□ 0.84
SCLT1-204ENST00000503215 MAP3K11Q16584 847 aa20.29■□□□□ 0.84
SCLT1-204ENST00000503215 SPRYD7Q5W111 196 aa20.29■□□□□ 0.84
SCLT1-204ENST00000503215 TEPSINQ96N21 525 aa20.29■□□□□ 0.84
SCLT1-204ENST00000503215 ECM29Q5VYK3 1845 aa20.28■□□□□ 0.84
SCLT1-204ENST00000503215 KIF16BQ96L93 1317 aa20.28■□□□□ 0.84
SCLT1-204ENST00000503215 CIAO1O76071 339 aa20.28■□□□□ 0.84
SCLT1-204ENST00000503215 TM4SF4P48230 202 aa20.28■□□□□ 0.84
SCLT1-204ENST00000503215 SUPT20HL1Q3ZLR7 823 aa20.28■□□□□ 0.84
SCLT1-204ENST00000503215 REM2Q8IYK8 340 aaPredicted RBP20.28■□□□□ 0.84
SCLT1-204ENST00000503215 TBC1D22AQ8WUA7 517 aa20.28■□□□□ 0.84
SCLT1-204ENST00000503215 FRAT1Q92837 279 aaPredicted RBP20.28■□□□□ 0.84
SCLT1-204ENST00000503215 SLC10A4Q96EP9 437 aa20.28■□□□□ 0.84
SCLT1-204ENST00000503215 R3HDMLQ9H3Y0 253 aa20.28■□□□□ 0.84
SCLT1-204ENST00000503215 CEP126Q9P2H0 1117 aa20.28■□□□□ 0.84
SCLT1-204ENST00000503215 PPP1R12BO60237 982 aaPredicted RBP20.27■□□□□ 0.84
SCLT1-204ENST00000503215 HNRNPUQ00839 825 aaKnown RBP eCLIP20.27■□□□□ 0.84
SCLT1-204ENST00000503215 ATP2B3Q16720 1220 aa20.27■□□□□ 0.84
SCLT1-204ENST00000503215 CLUAP1Q96AJ1 413 aa20.27■□□□□ 0.84
SCLT1-204ENST00000503215 TMEM39BQ9GZU3 492 aa20.27■□□□□ 0.84
SCLT1-204ENST00000503215 ADORA1P30542 326 aa20.26■□□□□ 0.83
SCLT1-204ENST00000503215 GJA5P36382 358 aa20.26■□□□□ 0.83
SCLT1-204ENST00000503215 APOBEC3HQ6NTF7 200 aaKnown RBP20.26■□□□□ 0.83
SCLT1-204ENST00000503215 COPRSQ9NQ92 184 aa20.26■□□□□ 0.83
SCLT1-204ENST00000503215 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.26■□□□□ 0.83
SCLT1-204ENST00000503215 ARAP2Q8WZ64 1704 aa20.25■□□□□ 0.83
SCLT1-204ENST00000503215 PHKA1P46020 1223 aa20.25■□□□□ 0.83
SCLT1-204ENST00000503215 HDLBPQ00341 1268 aaKnown RBP20.25■□□□□ 0.83
SCLT1-204ENST00000503215 ATF7IPQ6VMQ6 1270 aa20.25■□□□□ 0.83
SCLT1-204ENST00000503215 TEKT1Q969V4 418 aa20.25■□□□□ 0.83
SCLT1-204ENST00000503215 WNK4Q96J92 1243 aa20.25■□□□□ 0.83
SCLT1-204ENST00000503215 FBXO3Q9UK99 471 aa20.25■□□□□ 0.83
SCLT1-204ENST00000503215 IL15P40933 162 aaPredicted RBP20.24■□□□□ 0.83
SCLT1-204ENST00000503215 ZDHHC15Q96MV8 337 aa20.24■□□□□ 0.83
SCLT1-204ENST00000503215 IPO8O15397 1037 aaKnown RBP20.23■□□□□ 0.83
SCLT1-204ENST00000503215 SRGAP3O43295 1099 aa20.23■□□□□ 0.83
SCLT1-204ENST00000503215 GNAI3P08754 354 aa20.23■□□□□ 0.83
SCLT1-204ENST00000503215 TIMM10P62072 90 aa20.23■□□□□ 0.83
SCLT1-204ENST00000503215 TNFAIP1Q13829 316 aa20.23■□□□□ 0.83
SCLT1-204ENST00000503215 MRIQ9BWK5 157 aa20.23■□□□□ 0.83
SCLT1-204ENST00000503215 IREB2P48200 963 aaKnown RBP20.22■□□□□ 0.83
SCLT1-204ENST00000503215 DIXDC1Q155Q3 683 aa20.22■□□□□ 0.83
SCLT1-204ENST00000503215 ZNF296Q8WUU4 475 aaPredicted RBP20.22■□□□□ 0.83
SCLT1-204ENST00000503215 HDAC5Q9UQL6 1122 aa20.22■□□□□ 0.83
SCLT1-204ENST00000503215 PRDX5P30044 214 aa20.21■□□□□ 0.83
SCLT1-204ENST00000503215 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.21■□□□□ 0.83
SCLT1-204ENST00000503215 TMEM57Q8N5G2 664 aa20.21■□□□□ 0.83
SCLT1-204ENST00000503215 WDR66Q8TBY9 1149 aa20.21■□□□□ 0.83
SCLT1-204ENST00000503215 CNKSR2Q8WXI2 1034 aa20.21■□□□□ 0.83
SCLT1-204ENST00000503215 SUGT1Q9Y2Z0 365 aa20.21■□□□□ 0.83
SCLT1-204ENST00000503215 SREBF2Q12772 1141 aa20.21■□□□□ 0.83
SCLT1-204ENST00000503215 TFCP2Q12800 502 aa20.21■□□□□ 0.83
SCLT1-204ENST00000503215 MTX1Q13505 466 aa20.21■□□□□ 0.83
SCLT1-204ENST00000503215 HHIPL2Q6UWX4 724 aa20.21■□□□□ 0.83
SCLT1-204ENST00000503215 ELP3Q9H9T3 547 aa20.21■□□□□ 0.83
SCLT1-204ENST00000503215 PNMA6EA0A0J9YXQ4 647 aa20.2■□□□□ 0.82
SCLT1-204ENST00000503215 GPR25O00155 361 aa20.2■□□□□ 0.82
SCLT1-204ENST00000503215 IGF2BP3O00425 579 aaKnown RBP eCLIP20.2■□□□□ 0.82
SCLT1-204ENST00000503215 CCDC102BQ68D86 513 aa20.2■□□□□ 0.82
SCLT1-204ENST00000503215 IFNL1Q8IU54 200 aa20.2■□□□□ 0.82
SCLT1-204ENST00000503215 ANKRD13AQ8IZ07 590 aa20.2■□□□□ 0.82
SCLT1-204ENST00000503215 DAGLAQ9Y4D2 1042 aa20.2■□□□□ 0.82
SCLT1-204ENST00000503215 MANSC4A6NHS7 340 aaPredicted RBP20.19■□□□□ 0.82
SCLT1-204ENST00000503215 ZBTB48P10074 688 aaPredicted RBP20.19■□□□□ 0.82
SCLT1-204ENST00000503215 TNNI2P48788 182 aa20.19■□□□□ 0.82
SCLT1-204ENST00000503215 CTU1Q7Z7A3 348 aaKnown RBP20.19■□□□□ 0.82
SCLT1-204ENST00000503215 GNL3LQ9NVN8 582 aaKnown RBP20.19■□□□□ 0.82
SCLT1-204ENST00000503215 MAST3O60307 1309 aa20.18■□□□□ 0.82
SCLT1-204ENST00000503215 UNCXA6NJT0 531 aa20.18■□□□□ 0.82
SCLT1-204ENST00000503215 GNAI2P04899 355 aa20.18■□□□□ 0.82
SCLT1-204ENST00000503215 VGLL4Q14135 290 aa20.18■□□□□ 0.82
SCLT1-204ENST00000503215 ZKSCAN2Q63HK3 967 aa20.18■□□□□ 0.82
SCLT1-204ENST00000503215 CDC42EP5Q6NZY7 148 aa20.18■□□□□ 0.82
SCLT1-204ENST00000503215 OPTNQ96CV9 577 aa20.18■□□□□ 0.82
SCLT1-204ENST00000503215 PTPN18Q99952 460 aa20.18■□□□□ 0.82
SCLT1-204ENST00000503215 A0A1B0GUL7 405 aa20.17■□□□□ 0.82
SCLT1-204ENST00000503215 RLBP1P12271 317 aa20.17■□□□□ 0.82
SCLT1-204ENST00000503215 MAP3K9P80192 1104 aa20.17■□□□□ 0.82
SCLT1-204ENST00000503215 RASGRF1Q13972 1273 aa20.17■□□□□ 0.82
SCLT1-204ENST00000503215 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.17■□□□□ 0.82
SCLT1-204ENST00000503215 XAGE2Q96GT9 111 aa20.17■□□□□ 0.82
SCLT1-204ENST00000503215 DENND2AQ9ULE3 1009 aa20.17■□□□□ 0.82
SCLT1-204ENST00000503215 OTOFQ9HC10 1997 aa20.16■□□□□ 0.82
SCLT1-204ENST00000503215 LDHBP07195 334 aaKnown RBP20.16■□□□□ 0.82
SCLT1-204ENST00000503215 TCP10Q12799 353 aa20.16■□□□□ 0.82
SCLT1-204ENST00000503215 NFIAQ12857 509 aa20.16■□□□□ 0.82
SCLT1-204ENST00000503215 FKBP1CQ5VVH2 108 aa20.16■□□□□ 0.82
SCLT1-204ENST00000503215 FAM83AQ86UY5 434 aa20.16■□□□□ 0.82
SCLT1-204ENST00000503215 CFHR5Q9BXR6 569 aa20.16■□□□□ 0.82
SCLT1-204ENST00000503215 TMOD2Q9NZR1 351 aa20.16■□□□□ 0.82
SCLT1-204ENST00000503215 INHBEP58166 350 aa20.15■□□□□ 0.82
SCLT1-204ENST00000503215 MIGA2Q7L4E1 593 aa20.15■□□□□ 0.82
SCLT1-204ENST00000503215 ZFPM1Q8IX07 1006 aa20.15■□□□□ 0.82
SCLT1-204ENST00000503215 MS4A4AQ96JQ5 239 aa20.15■□□□□ 0.82
SCLT1-204ENST00000503215 C1orf115Q9H7X2 142 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms