RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 FAM114A1Q8IWE2 563 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 CCDC65Q8IXS2 484 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 ZNF397Q8NF99 534 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-203ENST00000502998 FAM76AQ8TAV0 307 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 GIMAP1Q8WWP7 306 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 TAF4BQ92750 862 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 RSRC1Q96IZ7 334 aaKnown RBP7.54□□□□□ -1.2
CLCN3-203ENST00000502998 DHRS1Q96LJ7 313 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 FAM81BQ96LP2 452 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 YIPF2Q9BWQ6 316 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 INO80BQ9C086 356 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-203ENST00000502998 NACA2Q9H009 215 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 SPTLC3Q9NUV7 552 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 NUDCQ9Y266 331 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 PLCH1Q4KWH8 1693 aa7.54□□□□□ -1.2
CLCN3-203ENST00000502998 PRR36Q9H6K5 1346 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 TULP4Q9NRJ4 1543 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 ARHGEF28Q8N1W1 1705 aaKnown RBP7.53□□□□□ -1.2
CLCN3-203ENST00000502998 TRPM3Q9HCF6 1732 aaPredicted RBP7.53□□□□□ -1.2
CLCN3-203ENST00000502998 TRIM64CA6NLI5 447 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 WASLO00401 505 aaPredicted RBP7.53□□□□□ -1.2
CLCN3-203ENST00000502998 RGL2O15211 777 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 CSB-PGBD3P0DP91 1061 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 HOXD10P28358 340 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 NF2P35240 595 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 SLC7A5Q01650 507 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 EIF2B5Q13144 721 aaKnown RBP7.53□□□□□ -1.2
CLCN3-203ENST00000502998 VPS72Q15906 364 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 NBPF8Q3BBV2 869 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 KBTBD12Q3ZCT8 623 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 SLFNL1Q499Z3 407 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 ZNF662Q6ZS27 426 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 KRT27Q7Z3Y8 459 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 ERC1Q8IUD2 1116 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 NEK9Q8TD19 979 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 GPT2Q8TD30 523 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 CDK5RAP3Q96JB5 506 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 MPP4Q96JB8 637 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 PSD3Q9NYI0 1048 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 KLHL42Q9P2K6 505 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 RABL2AQ9UBK7 228 aaPredicted RBP7.53□□□□□ -1.2
CLCN3-203ENST00000502998 IKBKGQ9Y6K9 419 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 ARHGEF10O15013 1369 aa7.53□□□□□ -1.2
CLCN3-203ENST00000502998 KTN1Q86UP2 1357 aaKnown RBP7.53□□□□□ -1.2
CLCN3-203ENST00000502998 EIF3AQ14152 1382 aaKnown RBP7.52□□□□□ -1.21
CLCN3-203ENST00000502998 GOLGA6L19H0YKK7 550 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 TRIM66O15016 1216 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 MMEP08473 750 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 ZNF445P59923 1031 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 IRF5Q13568 498 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 IQCB1Q15051 598 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 KIAA0753Q2KHM9 967 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 TSR1Q2NL82 804 aaKnown RBP7.52□□□□□ -1.21
CLCN3-203ENST00000502998 PREPLQ4J6C6 727 aaPredicted RBP7.52□□□□□ -1.21
CLCN3-203ENST00000502998 PARP10Q53GL7 1025 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 GBP6Q6ZN66 633 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 ANKRD13DQ6ZTN6 518 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 SEPT14Q6ZU15 432 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 SPATA21Q7Z572 469 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 PCGF5Q86SE9 256 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 LRRC49Q8IUZ0 686 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 ENOX1Q8TC92 643 aaKnown RBP7.52□□□□□ -1.21
CLCN3-203ENST00000502998 JAKMIP2Q96AA8 810 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 PAGR1Q9BTK6 254 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 RBSNQ9H1K0 784 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.52□□□□□ -1.21
CLCN3-203ENST00000502998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.52□□□□□ -1.21
CLCN3-203ENST00000502998 LMCD1Q9NZU5 365 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.52□□□□□ -1.21
CLCN3-203ENST00000502998 ATP6V0A2Q9Y487 856 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 NWD2Q9ULI1 1742 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 CEP350Q5VT06 3117 aa7.52□□□□□ -1.21
CLCN3-203ENST00000502998 ALS2Q96Q42 1657 aa7.51□□□□□ -1.21
CLCN3-203ENST00000502998 BRD4O60885 1362 aaPredicted RBP7.51□□□□□ -1.21
CLCN3-203ENST00000502998 GPRASP1Q5JY77 1395 aa7.51□□□□□ -1.21
CLCN3-203ENST00000502998 A0A1B0GUA9 196 aa7.51□□□□□ -1.21
CLCN3-203ENST00000502998 FAM83GA6ND36 823 aa7.51□□□□□ -1.21
CLCN3-203ENST00000502998 PDLIM1O00151 329 aa7.51□□□□□ -1.21
CLCN3-203ENST00000502998 MYL1P05976 194 aa7.51□□□□□ -1.21
CLCN3-203ENST00000502998 RLBP1P12271 317 aa7.51□□□□□ -1.21
CLCN3-203ENST00000502998 TCF3P15923 654 aa7.51□□□□□ -1.21
CLCN3-203ENST00000502998 MRPL12P52815 198 aaKnown RBP7.51□□□□□ -1.21
CLCN3-203ENST00000502998 PTK7Q13308 1070 aa7.51□□□□□ -1.21
CLCN3-203ENST00000502998 ARHGEF25Q86VW2 580 aa7.51□□□□□ -1.21
CLCN3-203ENST00000502998 GAS2L3Q86XJ1 694 aa7.51□□□□□ -1.21
CLCN3-203ENST00000502998 NFATC2IPQ8NCF5 419 aa7.51□□□□□ -1.21
CLCN3-203ENST00000502998 SREK1Q8WXA9 508 aaKnown RBP7.51□□□□□ -1.21
CLCN3-203ENST00000502998 SMARCC1Q92922 1105 aaPredicted RBP7.51□□□□□ -1.21
CLCN3-203ENST00000502998 KCNB2Q92953 911 aa7.51□□□□□ -1.21
CLCN3-203ENST00000502998 RBM17Q96I25 401 aaKnown RBP7.51□□□□□ -1.21
CLCN3-203ENST00000502998 SCLT1Q96NL6 688 aa7.51□□□□□ -1.21
CLCN3-203ENST00000502998 UIMC1Q96RL1 719 aa7.51□□□□□ -1.21
CLCN3-203ENST00000502998 CDC5LQ99459 802 aaKnown RBP7.51□□□□□ -1.21
CLCN3-203ENST00000502998 DUSP9Q99956 384 aaKnown RBP7.51□□□□□ -1.21
CLCN3-203ENST00000502998 THUMPD2Q9BTF0 503 aaKnown RBP7.51□□□□□ -1.21
CLCN3-203ENST00000502998 GPCPD1Q9NPB8 672 aa7.51□□□□□ -1.21
CLCN3-203ENST00000502998 ITGB1BP2Q9UKP3 347 aa7.51□□□□□ -1.21
CLCN3-203ENST00000502998 ATP7BP35670 1465 aa7.5□□□□□ -1.21
CLCN3-203ENST00000502998 PABPN1LA6NDY0 278 aaKnown RBP7.5□□□□□ -1.21
CLCN3-203ENST00000502998 TMEM110-MUSTN1A8MSY1 372 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms