RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SPDYE6P0CI01 402 aa30.72■■■□□ 2.51
LSM6-202ENST00000502781 DLGAP5Q15398 846 aa30.72■■■□□ 2.51
LSM6-202ENST00000502781 CNTROBQ8N137 903 aa30.72■■■□□ 2.51
LSM6-202ENST00000502781 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.72■■■□□ 2.51
LSM6-202ENST00000502781 LDHBP07195 334 aaKnown RBP30.71■■■□□ 2.51
LSM6-202ENST00000502781 CRKP46108 304 aa30.71■■■□□ 2.51
LSM6-202ENST00000502781 SNRKQ9NRH2 765 aa30.71■■■□□ 2.51
LSM6-202ENST00000502781 PCDHAC2Q9Y5I4 1007 aa30.71■■■□□ 2.51
LSM6-202ENST00000502781 ZAP70P43403 619 aa30.7■■■□□ 2.51
LSM6-202ENST00000502781 HHIPL2Q6UWX4 724 aa30.7■■■□□ 2.51
LSM6-202ENST00000502781 GGA3Q9NZ52 723 aa30.7■■■□□ 2.51
LSM6-202ENST00000502781 ABCF2Q9UG63 623 aa30.7■■■□□ 2.51
LSM6-202ENST00000502781 CYP2E1P05181 493 aaPredicted RBP30.69■■■□□ 2.5
LSM6-202ENST00000502781 SPTY2D1Q68D10 685 aaPredicted RBP30.69■■■□□ 2.5
LSM6-202ENST00000502781 TBC1D9Q6ZT07 1266 aa30.69■■■□□ 2.5
LSM6-202ENST00000502781 TEKT1Q969V4 418 aa30.69■■■□□ 2.5
LSM6-202ENST00000502781 PRMT6Q96LA8 375 aaPredicted RBP30.69■■■□□ 2.5
LSM6-202ENST00000502781 BCL11AQ9H165 835 aa30.69■■■□□ 2.5
LSM6-202ENST00000502781 PITPNM2Q9BZ72 1349 aa30.69■■■□□ 2.5
LSM6-202ENST00000502781 ATP5JP18859 108 aa30.68■■■□□ 2.5
LSM6-202ENST00000502781 PASKQ96RG2 1323 aa30.68■■■□□ 2.5
LSM6-202ENST00000502781 ANKRD45Q5TZF3 282 aa30.67■■■□□ 2.5
LSM6-202ENST00000502781 ANGEL2Q5VTE6 544 aaKnown RBP30.67■■■□□ 2.5
LSM6-202ENST00000502781 ZDHHC15Q96MV8 337 aa30.67■■■□□ 2.5
LSM6-202ENST00000502781 CDC37L1Q7L3B6 337 aa30.66■■■□□ 2.5
LSM6-202ENST00000502781 DCPSQ96C86 337 aaKnown RBP30.66■■■□□ 2.5
LSM6-202ENST00000502781 AOX1Q06278 1338 aa30.66■■■□□ 2.5
LSM6-202ENST00000502781 IGSF3O75054 1194 aa30.66■■■□□ 2.5
LSM6-202ENST00000502781 RBM5P52756 815 aaKnown RBP eCLIP30.66■■■□□ 2.5
LSM6-202ENST00000502781 DIXDC1Q155Q3 683 aa30.66■■■□□ 2.5
LSM6-202ENST00000502781 ERICH6Q7L0X2 663 aa30.66■■■□□ 2.5
LSM6-202ENST00000502781 ZNF384Q8TF68 577 aa30.66■■■□□ 2.5
LSM6-202ENST00000502781 APOBEC3HQ6NTF7 200 aaKnown RBP30.65■■■□□ 2.5
LSM6-202ENST00000502781 FAM163AQ96GL9 167 aaPredicted RBP30.65■■■□□ 2.5
LSM6-202ENST00000502781 GLIS2Q9BZE0 524 aaPredicted RBP30.65■■■□□ 2.5
LSM6-202ENST00000502781 ECHDC1Q9NTX5 307 aa30.65■■■□□ 2.5
LSM6-202ENST00000502781 SALL3Q9BXA9 1300 aa30.64■■■□□ 2.5
LSM6-202ENST00000502781 MECOMQ03112 1051 aa30.64■■■□□ 2.5
LSM6-202ENST00000502781 KRT26Q7Z3Y9 468 aa30.64■■■□□ 2.5
LSM6-202ENST00000502781 NSUN4Q96CB9 384 aaKnown RBP30.64■■■□□ 2.5
LSM6-202ENST00000502781 PIH1D3Q9NQM4 214 aaKnown RBP30.64■■■□□ 2.5
LSM6-202ENST00000502781 DAGLAQ9Y4D2 1042 aa30.64■■■□□ 2.5
LSM6-202ENST00000502781 NDUFB9Q9Y6M9 179 aa30.64■■■□□ 2.5
LSM6-202ENST00000502781 GAKO14976 1311 aa30.63■■■□□ 2.49
LSM6-202ENST00000502781 DZIP1Q86YF9 867 aaKnown RBP30.63■■■□□ 2.49
LSM6-202ENST00000502781 OTUD7AQ8TE49 926 aaPredicted RBP30.63■■■□□ 2.49
LSM6-202ENST00000502781 ANTXR1Q9H6X2 564 aa30.63■■■□□ 2.49
LSM6-202ENST00000502781 MYO1BO43795 1136 aa30.62■■■□□ 2.49
LSM6-202ENST00000502781 NUCB1Q02818 461 aa30.62■■■□□ 2.49
LSM6-202ENST00000502781 USP48Q86UV5 1035 aa30.62■■■□□ 2.49
LSM6-202ENST00000502781 LRP2BPQ9P2M1 347 aa30.62■■■□□ 2.49
LSM6-202ENST00000502781 SPDYE2Q495Y8 402 aa30.61■■■□□ 2.49
LSM6-202ENST00000502781 SULF1Q8IWU6 871 aa30.61■■■□□ 2.49
LSM6-202ENST00000502781 HAUS7Q99871 368 aa30.61■■■□□ 2.49
LSM6-202ENST00000502781 BOLA2Q9H3K6 86 aa30.61■■■□□ 2.49
LSM6-202ENST00000502781 ZBTB47Q9UFB7 747 aaPredicted RBP30.61■■■□□ 2.49
LSM6-202ENST00000502781 TTC41PQ6P2S7 1318 aa30.61■■■□□ 2.49
LSM6-202ENST00000502781 TRAF5O00463 557 aa30.6■■■□□ 2.49
LSM6-202ENST00000502781 SLF2Q8IX21 1173 aa30.6■■■□□ 2.49
LSM6-202ENST00000502781 GPATCH3Q96I76 525 aa30.6■■■□□ 2.49
LSM6-202ENST00000502781 TDRD3Q9H7E2 651 aaKnown RBP30.6■■■□□ 2.49
LSM6-202ENST00000502781 RAI14Q9P0K7 980 aa30.6■■■□□ 2.49
LSM6-202ENST00000502781 ZNF70Q9UC06 446 aaPredicted RBP30.6■■■□□ 2.49
LSM6-202ENST00000502781 POLR2AP24928 1970 aaKnown RBP30.6■■■□□ 2.49
LSM6-202ENST00000502781 CLRN2A0PK11 232 aa30.59■■■□□ 2.49
LSM6-202ENST00000502781 ADM5C9JUS6 153 aa30.59■■■□□ 2.49
LSM6-202ENST00000502781 HSPA6P17066 643 aa30.59■■■□□ 2.49
LSM6-202ENST00000502781 FMR1Q06787 632 aaKnown RBP eCLIP30.59■■■□□ 2.49
LSM6-202ENST00000502781 APOBEC3FQ8IUX4 373 aaKnown RBP30.59■■■□□ 2.49
LSM6-202ENST00000502781 TTF1Q15361 905 aaPredicted RBP30.58■■■□□ 2.49
LSM6-202ENST00000502781 B4GALNT3Q6L9W6 998 aa30.58■■■□□ 2.49
LSM6-202ENST00000502781 CHD1LQ86WJ1 897 aa30.58■■■□□ 2.49
LSM6-202ENST00000502781 MX1P20591 662 aa30.57■■■□□ 2.48
LSM6-202ENST00000502781 APLP1P51693 650 aa30.57■■■□□ 2.48
LSM6-202ENST00000502781 GSTO1P78417 241 aa30.57■■■□□ 2.48
LSM6-202ENST00000502781 DLK2Q6UY11 383 aa30.57■■■□□ 2.48
LSM6-202ENST00000502781 DNAJC2Q99543 621 aaKnown RBP30.57■■■□□ 2.48
LSM6-202ENST00000502781 LNPKQ9C0E8 428 aa30.57■■■□□ 2.48
LSM6-202ENST00000502781 ECM29Q5VYK3 1845 aa30.57■■■□□ 2.48
LSM6-202ENST00000502781 MROH7-TTC4A0A0A0MT08 1334 aa30.57■■■□□ 2.48
LSM6-202ENST00000502781 TSHZ3Q63HK5 1081 aa30.56■■■□□ 2.48
LSM6-202ENST00000502781 PI4K2BQ8TCG2 481 aa30.56■■■□□ 2.48
LSM6-202ENST00000502781 STAP2Q9UGK3 403 aa30.56■■■□□ 2.48
LSM6-202ENST00000502781 GOLIM4O00461 696 aa30.55■■■□□ 2.48
LSM6-202ENST00000502781 LDHCP07864 332 aa30.55■■■□□ 2.48
LSM6-202ENST00000502781 EDC3Q96F86 508 aaKnown RBP30.55■■■□□ 2.48
LSM6-202ENST00000502781 PAG1Q9NWQ8 432 aa30.55■■■□□ 2.48
LSM6-202ENST00000502781 SCAF8Q9UPN6 1271 aaKnown RBP30.55■■■□□ 2.48
LSM6-202ENST00000502781 GPR75-ASB3A0A0A6YYF3 556 aa30.54■■■□□ 2.48
LSM6-202ENST00000502781 IDH1O75874 414 aaKnown RBP30.54■■■□□ 2.48
LSM6-202ENST00000502781 NEFLP07196 543 aa30.54■■■□□ 2.48
LSM6-202ENST00000502781 FKBP1CQ5VVH2 108 aa30.54■■■□□ 2.48
LSM6-202ENST00000502781 CDC42EP5Q6NZY7 148 aa30.54■■■□□ 2.48
LSM6-202ENST00000502781 TMED8Q6PL24 325 aaPredicted RBP30.54■■■□□ 2.48
LSM6-202ENST00000502781 MYH2Q9UKX2 1941 aa30.54■■■□□ 2.48
LSM6-202ENST00000502781 ERC2O15083 957 aa30.53■■■□□ 2.48
LSM6-202ENST00000502781 GLRX3O76003 335 aaKnown RBP30.53■■■□□ 2.48
LSM6-202ENST00000502781 MAP3K12Q12852 859 aa30.53■■■□□ 2.48
LSM6-202ENST00000502781 CST9Q5W186 159 aa30.53■■■□□ 2.48
LSM6-202ENST00000502781 NAA16Q6N069 864 aaPredicted RBP30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms