RNA–Protein interactions for RNA: ENST00000502734.1

COPB2-202, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-202ENST00000502734 ZNF70Q9UC06 446 aaPredicted RBP11.29□□□□□ -0.6
COPB2-202ENST00000502734 FZD1Q9UP38 647 aa11.29□□□□□ -0.6
COPB2-202ENST00000502734 IQSEC3Q9UPP2 1182 aaPredicted RBP11.29□□□□□ -0.6
COPB2-202ENST00000502734 HDAC5Q9UQL6 1122 aa11.29□□□□□ -0.6
COPB2-202ENST00000502734 PAPPA2Q9BXP8 1791 aa11.28□□□□□ -0.6
COPB2-202ENST00000502734 EYA2O00167 538 aa11.28□□□□□ -0.6
COPB2-202ENST00000502734 USP2O75604 605 aaPredicted RBP11.28□□□□□ -0.6
COPB2-202ENST00000502734 UBTFL1P0CB47 393 aaPredicted RBP11.28□□□□□ -0.6
COPB2-202ENST00000502734 CRKP46108 304 aa11.28□□□□□ -0.6
COPB2-202ENST00000502734 IREB2P48200 963 aaKnown RBP11.28□□□□□ -0.6
COPB2-202ENST00000502734 RFX5P48382 616 aaPredicted RBP11.28□□□□□ -0.6
COPB2-202ENST00000502734 RGS19P49795 217 aa11.28□□□□□ -0.6
COPB2-202ENST00000502734 HDLBPQ00341 1268 aaKnown RBP11.28□□□□□ -0.6
COPB2-202ENST00000502734 SPDYE2Q495Y8 402 aa11.28□□□□□ -0.6
COPB2-202ENST00000502734 API5Q9BZZ5 524 aaKnown RBP11.28□□□□□ -0.6
COPB2-202ENST00000502734 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.28□□□□□ -0.6
COPB2-202ENST00000502734 AOX1Q06278 1338 aa11.28□□□□□ -0.6
COPB2-202ENST00000502734 COL1A1P02452 1464 aaPredicted RBP11.27□□□□□ -0.6
COPB2-202ENST00000502734 FGFR2P21802 821 aa11.27□□□□□ -0.61
COPB2-202ENST00000502734 PUM3Q15397 648 aaKnown RBP11.27□□□□□ -0.61
COPB2-202ENST00000502734 GRIK5Q16478 980 aa11.27□□□□□ -0.61
COPB2-202ENST00000502734 CTU1Q7Z7A3 348 aaKnown RBP11.27□□□□□ -0.61
COPB2-202ENST00000502734 LPIN2Q92539 896 aa11.27□□□□□ -0.61
COPB2-202ENST00000502734 FBXO3Q9UK99 471 aa11.27□□□□□ -0.61
COPB2-202ENST00000502734 MANSC4A6NHS7 340 aaPredicted RBP11.26□□□□□ -0.61
COPB2-202ENST00000502734 TCP10L2B9ZVM9 353 aa11.26□□□□□ -0.61
COPB2-202ENST00000502734 GPR25O00155 361 aa11.26□□□□□ -0.61
COPB2-202ENST00000502734 ALDH1A1P00352 501 aa11.26□□□□□ -0.61
COPB2-202ENST00000502734 ZBTB48P10074 688 aaPredicted RBP11.26□□□□□ -0.61
COPB2-202ENST00000502734 SLC5A1P13866 664 aa11.26□□□□□ -0.61
COPB2-202ENST00000502734 TNNI2P48788 182 aa11.26□□□□□ -0.61
COPB2-202ENST00000502734 RARSP54136 660 aaKnown RBP11.26□□□□□ -0.61
COPB2-202ENST00000502734 MLLT1Q03111 559 aaPredicted RBP11.26□□□□□ -0.61
COPB2-202ENST00000502734 NOM1Q5C9Z4 860 aaKnown RBP11.26□□□□□ -0.61
COPB2-202ENST00000502734 ATG9AQ7Z3C6 839 aa11.26□□□□□ -0.61
COPB2-202ENST00000502734 ANKRD13AQ8IZ07 590 aa11.26□□□□□ -0.61
COPB2-202ENST00000502734 ZNF296Q8WUU4 475 aaPredicted RBP11.26□□□□□ -0.61
COPB2-202ENST00000502734 ARHGAP45Q92619 1136 aa11.26□□□□□ -0.61
COPB2-202ENST00000502734 TEKT1Q969V4 418 aa11.26□□□□□ -0.61
COPB2-202ENST00000502734 CLMNQ96JQ2 1002 aa11.26□□□□□ -0.61
COPB2-202ENST00000502734 CEP126Q9P2H0 1117 aa11.26□□□□□ -0.61
COPB2-202ENST00000502734 SUGT1Q9Y2Z0 365 aa11.26□□□□□ -0.61
COPB2-202ENST00000502734 KIF16BQ96L93 1317 aa11.26□□□□□ -0.61
COPB2-202ENST00000502734 ZNF646O15015 1829 aaPredicted RBP11.25□□□□□ -0.61
COPB2-202ENST00000502734 PKN2Q16513 984 aaKnown RBP11.25□□□□□ -0.61
COPB2-202ENST00000502734 WDR66Q8TBY9 1149 aa11.25□□□□□ -0.61
COPB2-202ENST00000502734 WNK4Q96J92 1243 aa11.25□□□□□ -0.61
COPB2-202ENST00000502734 TEPSINQ96N21 525 aa11.25□□□□□ -0.61
COPB2-202ENST00000502734 CFHR5Q9BXR6 569 aa11.25□□□□□ -0.61
COPB2-202ENST00000502734 AKAP11Q9UKA4 1901 aa11.25□□□□□ -0.61
COPB2-202ENST00000502734 FKTNO75072 461 aa11.24□□□□□ -0.61
COPB2-202ENST00000502734 CIAO1O76071 339 aa11.24□□□□□ -0.61
COPB2-202ENST00000502734 IL15P40933 162 aaPredicted RBP11.24□□□□□ -0.61
COPB2-202ENST00000502734 MAP3K9P80192 1104 aa11.24□□□□□ -0.61
COPB2-202ENST00000502734 OTUD7BQ6GQQ9 843 aa11.24□□□□□ -0.61
COPB2-202ENST00000502734 APOBEC3HQ6NTF7 200 aaKnown RBP11.24□□□□□ -0.61
COPB2-202ENST00000502734 HHIPL2Q6UWX4 724 aa11.24□□□□□ -0.61
COPB2-202ENST00000502734 IFNL1Q8IU54 200 aa11.24□□□□□ -0.61
COPB2-202ENST00000502734 ZDHHC15Q96MV8 337 aa11.24□□□□□ -0.61
COPB2-202ENST00000502734 TMEM39BQ9GZU3 492 aa11.24□□□□□ -0.61
COPB2-202ENST00000502734 SIL1Q9H173 461 aa11.24□□□□□ -0.61
COPB2-202ENST00000502734 R3HDMLQ9H3Y0 253 aa11.24□□□□□ -0.61
COPB2-202ENST00000502734 GNL3LQ9NVN8 582 aaKnown RBP11.24□□□□□ -0.61
COPB2-202ENST00000502734 LRRFIP2Q9Y608 721 aaKnown RBP11.24□□□□□ -0.61
COPB2-202ENST00000502734 IPO8O15397 1037 aaKnown RBP11.23□□□□□ -0.61
COPB2-202ENST00000502734 ATP2B3Q16720 1220 aa11.23□□□□□ -0.61
COPB2-202ENST00000502734 FKBP1CQ5VVH2 108 aa11.23□□□□□ -0.61
COPB2-202ENST00000502734 INTS3Q68E01 1043 aaKnown RBP11.23□□□□□ -0.61
COPB2-202ENST00000502734 COPRSQ9NQ92 184 aa11.23□□□□□ -0.61
COPB2-202ENST00000502734 TMOD2Q9NZR1 351 aa11.23□□□□□ -0.61
COPB2-202ENST00000502734 MAST3O60307 1309 aa11.23□□□□□ -0.61
COPB2-202ENST00000502734 GNAI3P08754 354 aa11.22□□□□□ -0.61
COPB2-202ENST00000502734 GJA5P36382 358 aa11.22□□□□□ -0.61
COPB2-202ENST00000502734 CACNB3P54284 484 aa11.22□□□□□ -0.61
COPB2-202ENST00000502734 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.22□□□□□ -0.61
COPB2-202ENST00000502734 FAM83AQ86UY5 434 aa11.22□□□□□ -0.61
COPB2-202ENST00000502734 MEIS3Q99687 375 aa11.22□□□□□ -0.61
COPB2-202ENST00000502734 ELP3Q9H9T3 547 aa11.22□□□□□ -0.61
COPB2-202ENST00000502734 PA2G4Q9UQ80 394 aaKnown RBP11.22□□□□□ -0.61
COPB2-202ENST00000502734 SSC5DA1L4H1 1573 aa11.21□□□□□ -0.61
COPB2-202ENST00000502734 TESPA1A2RU30 521 aaPredicted RBP11.21□□□□□ -0.61
COPB2-202ENST00000502734 IGF2BP3O00425 579 aaKnown RBP eCLIP11.21□□□□□ -0.61
COPB2-202ENST00000502734 CDAN1Q8IWY9 1227 aa11.21□□□□□ -0.61
COPB2-202ENST00000502734 OPTNQ96CV9 577 aa11.21□□□□□ -0.61
COPB2-202ENST00000502734 HOOK2Q96ED9 719 aa11.21□□□□□ -0.61
COPB2-202ENST00000502734 DENND2AQ9ULE3 1009 aa11.21□□□□□ -0.61
COPB2-202ENST00000502734 HPS5Q9UPZ3 1129 aa11.21□□□□□ -0.61
COPB2-202ENST00000502734 CSADQ9Y600 493 aa11.21□□□□□ -0.61
COPB2-202ENST00000502734 SEMA3EO15041 775 aa11.2□□□□□ -0.62
COPB2-202ENST00000502734 LDHBP07195 334 aaKnown RBP11.2□□□□□ -0.62
COPB2-202ENST00000502734 TIMM10P62072 90 aa11.2□□□□□ -0.62
COPB2-202ENST00000502734 FBXO46Q6PJ61 603 aaPredicted RBP11.2□□□□□ -0.62
COPB2-202ENST00000502734 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.2□□□□□ -0.62
COPB2-202ENST00000502734 MS4A4AQ96JQ5 239 aa11.2□□□□□ -0.62
COPB2-202ENST00000502734 PTPN18Q99952 460 aa11.2□□□□□ -0.62
COPB2-202ENST00000502734 A0A1B0GUL6 1792 aa11.2□□□□□ -0.62
COPB2-202ENST00000502734 SRGAP3O43295 1099 aa11.19□□□□□ -0.62
COPB2-202ENST00000502734 BCAR3O75815 825 aa11.19□□□□□ -0.62
COPB2-202ENST00000502734 PHKA1P46020 1223 aa11.19□□□□□ -0.62
COPB2-202ENST00000502734 GTF2A2P52657 109 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms