RNA–Protein interactions for RNA: ENST00000502690.5

UBE2D3-213, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-213ENST00000502690 HTTP42858 3142 aa21.41■■□□□ 1.02
UBE2D3-213ENST00000502690 TCP10L2B9ZVM9 353 aa21.4■■□□□ 1.02
UBE2D3-213ENST00000502690 PPP1R12BO60237 982 aaPredicted RBP21.4■■□□□ 1.02
UBE2D3-213ENST00000502690 SUPT20HL1Q3ZLR7 823 aa21.4■■□□□ 1.02
UBE2D3-213ENST00000502690 IFNL1Q8IU54 200 aa21.4■■□□□ 1.02
UBE2D3-213ENST00000502690 TRMT2AQ8IZ69 625 aaKnown RBP21.4■■□□□ 1.02
UBE2D3-213ENST00000502690 TMEM39BQ9GZU3 492 aa21.4■■□□□ 1.02
UBE2D3-213ENST00000502690 FGFR2P21802 821 aa21.39■■□□□ 1.01
UBE2D3-213ENST00000502690 CACNB3P54284 484 aa21.39■■□□□ 1.01
UBE2D3-213ENST00000502690 NOM1Q5C9Z4 860 aaKnown RBP21.39■■□□□ 1.01
UBE2D3-213ENST00000502690 SMC4Q9NTJ3 1288 aa21.39■■□□□ 1.01
UBE2D3-213ENST00000502690 MANSC4A6NHS7 340 aaPredicted RBP21.38■■□□□ 1.01
UBE2D3-213ENST00000502690 ZBTB48P10074 688 aaPredicted RBP21.38■■□□□ 1.01
UBE2D3-213ENST00000502690 VPS37DQ86XT2 251 aa21.38■■□□□ 1.01
UBE2D3-213ENST00000502690 CNKSR2Q8WXI2 1034 aa21.38■■□□□ 1.01
UBE2D3-213ENST00000502690 IREB2P48200 963 aaKnown RBP21.37■■□□□ 1.01
UBE2D3-213ENST00000502690 ALDH1L2Q3SY69 923 aa21.37■■□□□ 1.01
UBE2D3-213ENST00000502690 ATG9AQ7Z3C6 839 aa21.37■■□□□ 1.01
UBE2D3-213ENST00000502690 ELP3Q9H9T3 547 aa21.37■■□□□ 1.01
UBE2D3-213ENST00000502690 FKTNO75072 461 aa21.36■■□□□ 1.01
UBE2D3-213ENST00000502690 PUM3Q15397 648 aaKnown RBP21.36■■□□□ 1.01
UBE2D3-213ENST00000502690 CAVIN4Q5BKX8 364 aa21.36■■□□□ 1.01
UBE2D3-213ENST00000502690 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.36■■□□□ 1.01
UBE2D3-213ENST00000502690 PTPN18Q99952 460 aa21.36■■□□□ 1.01
UBE2D3-213ENST00000502690 ZSWIM8A7E2V4 1837 aa21.36■■□□□ 1.01
UBE2D3-213ENST00000502690 EYA2O00167 538 aa21.35■■□□□ 1.01
UBE2D3-213ENST00000502690 CAP1Q01518 475 aa21.35■■□□□ 1.01
UBE2D3-213ENST00000502690 TNFAIP1Q13829 316 aa21.35■■□□□ 1.01
UBE2D3-213ENST00000502690 ANKRD13AQ8IZ07 590 aa21.35■■□□□ 1.01
UBE2D3-213ENST00000502690 FRAT2O75474 233 aaPredicted RBP21.34■■□□□ 1.01
UBE2D3-213ENST00000502690 OPTNQ96CV9 577 aa21.34■■□□□ 1.01
UBE2D3-213ENST00000502690 NOB1Q9ULX3 412 aaKnown RBP21.34■■□□□ 1.01
UBE2D3-213ENST00000502690 KIF16BQ96L93 1317 aa21.33■■□□□ 1.01
UBE2D3-213ENST00000502690 UNCXA6NJT0 531 aa21.33■■□□□ 1.01
UBE2D3-213ENST00000502690 ALDH1A1P00352 501 aa21.33■■□□□ 1.01
UBE2D3-213ENST00000502690 CRHR2Q13324 411 aa21.33■■□□□ 1.01
UBE2D3-213ENST00000502690 VGLL4Q14135 290 aa21.33■■□□□ 1.01
UBE2D3-213ENST00000502690 PKN2Q16513 984 aaKnown RBP21.33■■□□□ 1.01
UBE2D3-213ENST00000502690 APOBEC3HQ6NTF7 200 aaKnown RBP21.33■■□□□ 1.01
UBE2D3-213ENST00000502690 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.33■■□□□ 1.01
UBE2D3-213ENST00000502690 TBC1D22AQ8WUA7 517 aa21.33■■□□□ 1.01
UBE2D3-213ENST00000502690 TEKT1Q969V4 418 aa21.33■■□□□ 1.01
UBE2D3-213ENST00000502690 SIL1Q9H173 461 aa21.33■■□□□ 1.01
UBE2D3-213ENST00000502690 AK9Q5TCS8 1911 aa21.33■■□□□ 1
UBE2D3-213ENST00000502690 HDLBPQ00341 1268 aaKnown RBP21.32■■□□□ 1
UBE2D3-213ENST00000502690 FBXO46Q6PJ61 603 aaPredicted RBP21.32■■□□□ 1
UBE2D3-213ENST00000502690 MS4A4AQ96JQ5 239 aa21.32■■□□□ 1
UBE2D3-213ENST00000502690 ZDHHC15Q96MV8 337 aa21.32■■□□□ 1
UBE2D3-213ENST00000502690 MYH2Q9UKX2 1941 aa21.31■■□□□ 1
UBE2D3-213ENST00000502690 CENPFP49454 3210 aa21.31■■□□□ 1
UBE2D3-213ENST00000502690 TESPA1A2RU30 521 aaPredicted RBP21.31■■□□□ 1
UBE2D3-213ENST00000502690 IFIT1P09914 478 aaKnown RBP21.31■■□□□ 1
UBE2D3-213ENST00000502690 INHBEP58166 350 aa21.31■■□□□ 1
UBE2D3-213ENST00000502690 PA2G4Q9UQ80 394 aaKnown RBP21.31■■□□□ 1
UBE2D3-213ENST00000502690 UBTFL1P0CB47 393 aaPredicted RBP21.3■■□□□ 1
UBE2D3-213ENST00000502690 SLC5A1P13866 664 aa21.3■■□□□ 1
UBE2D3-213ENST00000502690 BRI3BPQ8WY22 251 aa21.3■■□□□ 1
UBE2D3-213ENST00000502690 LPIN2Q92539 896 aa21.3■■□□□ 1
UBE2D3-213ENST00000502690 MEIS3Q99687 375 aa21.3■■□□□ 1
UBE2D3-213ENST00000502690 LRRFIP2Q9Y608 721 aaKnown RBP21.3■■□□□ 1
UBE2D3-213ENST00000502690 RBBP6Q7Z6E9 1792 aaKnown RBP21.29■■□□□ 1
UBE2D3-213ENST00000502690 TNNI2P48788 182 aa21.29■■□□□ 1
UBE2D3-213ENST00000502690 OTOP1Q7RTM1 612 aa21.29■■□□□ 1
UBE2D3-213ENST00000502690 TRIM17Q9Y577 477 aa21.29■■□□□ 1
UBE2D3-213ENST00000502690 SNCAIPQ9Y6H5 919 aa21.29■■□□□ 1
UBE2D3-213ENST00000502690 DOCK2Q92608 1830 aa21.28■■□□□ 1
UBE2D3-213ENST00000502690 DIXDC1Q155Q3 683 aa21.28■■□□□ 1
UBE2D3-213ENST00000502690 CD99L2Q8TCZ2 262 aa21.28■■□□□ 1
UBE2D3-213ENST00000502690 OTUD5Q96G74 571 aa21.28■■□□□ 1
UBE2D3-213ENST00000502690 PRDX5P30044 214 aa21.27■■□□□ 1
UBE2D3-213ENST00000502690 ADORA1P30542 326 aa21.27■■□□□ 1
UBE2D3-213ENST00000502690 MAP3K9P80192 1104 aa21.27■■□□□ 1
UBE2D3-213ENST00000502690 ATP2B3Q16720 1220 aa21.27■■□□□ 1
UBE2D3-213ENST00000502690 MAST3O60307 1309 aa21.27■□□□□ 0.99
UBE2D3-213ENST00000502690 RPAP1Q9BWH6 1393 aaPredicted RBP21.26■□□□□ 0.99
UBE2D3-213ENST00000502690 CIAO1O76071 339 aa21.26■□□□□ 0.99
UBE2D3-213ENST00000502690 PHKA1P46020 1223 aa21.26■□□□□ 0.99
UBE2D3-213ENST00000502690 RARSP54136 660 aaKnown RBP21.26■□□□□ 0.99
UBE2D3-213ENST00000502690 HHIPL2Q6UWX4 724 aa21.26■□□□□ 0.99
UBE2D3-213ENST00000502690 FAM43AQ8N2R8 423 aa21.26■□□□□ 0.99
UBE2D3-213ENST00000502690 ZKSCAN4Q969J2 545 aaPredicted RBP21.26■□□□□ 0.99
UBE2D3-213ENST00000502690 MRIQ9BWK5 157 aa21.26■□□□□ 0.99
UBE2D3-213ENST00000502690 TNNQ9UQP3 1299 aa21.26■□□□□ 0.99
UBE2D3-213ENST00000502690 SUGT1Q9Y2Z0 365 aa21.26■□□□□ 0.99
UBE2D3-213ENST00000502690 DAGLAQ9Y4D2 1042 aa21.26■□□□□ 0.99
UBE2D3-213ENST00000502690 CCL15-CCL14A0A0B4J2E2 113 aa21.25■□□□□ 0.99
UBE2D3-213ENST00000502690 NFIAQ12857 509 aa21.25■□□□□ 0.99
UBE2D3-213ENST00000502690 CCL15Q16663 113 aa21.25■□□□□ 0.99
UBE2D3-213ENST00000502690 FAM83AQ86UY5 434 aa21.25■□□□□ 0.99
UBE2D3-213ENST00000502690 WRNIP1Q96S55 665 aa21.25■□□□□ 0.99
UBE2D3-213ENST00000502690 API5Q9BZZ5 524 aaKnown RBP21.25■□□□□ 0.99
UBE2D3-213ENST00000502690 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.25■□□□□ 0.99
UBE2D3-213ENST00000502690 BRCA2P51587 3418 aa21.25■□□□□ 0.99
UBE2D3-213ENST00000502690 SPDYE5A6NIY4 337 aa21.24■□□□□ 0.99
UBE2D3-213ENST00000502690 CT47B1P0C2W7 299 aaPredicted RBP21.24■□□□□ 0.99
UBE2D3-213ENST00000502690 WDR66Q8TBY9 1149 aa21.24■□□□□ 0.99
UBE2D3-213ENST00000502690 TMOD2Q9NZR1 351 aa21.24■□□□□ 0.99
UBE2D3-213ENST00000502690 CSADQ9Y600 493 aa21.24■□□□□ 0.99
UBE2D3-213ENST00000502690 KIAA0100Q14667 2235 aaKnown RBP21.24■□□□□ 0.99
UBE2D3-213ENST00000502690 SLC34A2O95436 690 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms