RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 TDRD3Q9H7E2 651 aaKnown RBP24.62■■□□□ 1.53
SFXN1-203ENST00000502393 FZD1Q9UP38 647 aa24.62■■□□□ 1.53
SFXN1-203ENST00000502393 SSC5DA1L4H1 1573 aa24.62■■□□□ 1.53
SFXN1-203ENST00000502393 MKRN3Q13064 507 aaKnown RBP24.61■■□□□ 1.53
SFXN1-203ENST00000502393 GRIK5Q16478 980 aa24.61■■□□□ 1.53
SFXN1-203ENST00000502393 SPRYD7Q5W111 196 aa24.61■■□□□ 1.53
SFXN1-203ENST00000502393 MRIQ9BWK5 157 aa24.61■■□□□ 1.53
SFXN1-203ENST00000502393 SUGT1Q9Y2Z0 365 aa24.61■■□□□ 1.53
SFXN1-203ENST00000502393 LRRFIP2Q9Y608 721 aaKnown RBP24.61■■□□□ 1.53
SFXN1-203ENST00000502393 CCDC85CA6NKD9 419 aa24.6■■□□□ 1.53
SFXN1-203ENST00000502393 INTS3Q68E01 1043 aaKnown RBP24.6■■□□□ 1.53
SFXN1-203ENST00000502393 IREB2P48200 963 aaKnown RBP24.59■■□□□ 1.53
SFXN1-203ENST00000502393 TEKT1Q969V4 418 aa24.59■■□□□ 1.53
SFXN1-203ENST00000502393 MEIS3Q99687 375 aa24.59■■□□□ 1.53
SFXN1-203ENST00000502393 SIL1Q9H173 461 aa24.59■■□□□ 1.53
SFXN1-203ENST00000502393 CEP126Q9P2H0 1117 aa24.59■■□□□ 1.53
SFXN1-203ENST00000502393 IPO8O15397 1037 aaKnown RBP24.58■■□□□ 1.53
SFXN1-203ENST00000502393 TNNI2P48788 182 aa24.58■■□□□ 1.53
SFXN1-203ENST00000502393 MAST3O60307 1309 aa24.58■■□□□ 1.52
SFXN1-203ENST00000502393 USP2O75604 605 aaPredicted RBP24.57■■□□□ 1.52
SFXN1-203ENST00000502393 GNAI3P08754 354 aa24.57■■□□□ 1.52
SFXN1-203ENST00000502393 ZBTB48P10074 688 aaPredicted RBP24.57■■□□□ 1.52
SFXN1-203ENST00000502393 IL15P40933 162 aaPredicted RBP24.57■■□□□ 1.52
SFXN1-203ENST00000502393 INHBEP58166 350 aa24.57■■□□□ 1.52
SFXN1-203ENST00000502393 ZDHHC15Q96MV8 337 aa24.57■■□□□ 1.52
SFXN1-203ENST00000502393 TCP10L2B9ZVM9 353 aa24.56■■□□□ 1.52
SFXN1-203ENST00000502393 TBC1D8O95759 1140 aa24.56■■□□□ 1.52
SFXN1-203ENST00000502393 ATP2B3Q16720 1220 aa24.56■■□□□ 1.52
SFXN1-203ENST00000502393 ANKRD13AQ8IZ07 590 aa24.56■■□□□ 1.52
SFXN1-203ENST00000502393 WDR66Q8TBY9 1149 aa24.56■■□□□ 1.52
SFXN1-203ENST00000502393 CLMNQ96JQ2 1002 aa24.56■■□□□ 1.52
SFXN1-203ENST00000502393 TEPSINQ96N21 525 aa24.56■■□□□ 1.52
SFXN1-203ENST00000502393 COPRSQ9NQ92 184 aa24.56■■□□□ 1.52
SFXN1-203ENST00000502393 MANSC4A6NHS7 340 aaPredicted RBP24.55■■□□□ 1.52
SFXN1-203ENST00000502393 NOM1Q5C9Z4 860 aaKnown RBP24.55■■□□□ 1.52
SFXN1-203ENST00000502393 WNK4Q96J92 1243 aa24.55■■□□□ 1.52
SFXN1-203ENST00000502393 CFHR5Q9BXR6 569 aa24.55■■□□□ 1.52
SFXN1-203ENST00000502393 ALDH1A1P00352 501 aa24.54■■□□□ 1.52
SFXN1-203ENST00000502393 HHIPL2Q6UWX4 724 aa24.54■■□□□ 1.52
SFXN1-203ENST00000502393 CTU1Q7Z7A3 348 aaKnown RBP24.54■■□□□ 1.52
SFXN1-203ENST00000502393 TMEM39BQ9GZU3 492 aa24.54■■□□□ 1.52
SFXN1-203ENST00000502393 GNL3LQ9NVN8 582 aaKnown RBP24.54■■□□□ 1.52
SFXN1-203ENST00000502393 PA2G4Q9UQ80 394 aaKnown RBP24.54■■□□□ 1.52
SFXN1-203ENST00000502393 TRIM27P14373 513 aa24.53■■□□□ 1.52
SFXN1-203ENST00000502393 APOBEC3HQ6NTF7 200 aaKnown RBP24.53■■□□□ 1.52
SFXN1-203ENST00000502393 ATF7IPQ6VMQ6 1270 aa24.53■■□□□ 1.52
SFXN1-203ENST00000502393 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.53■■□□□ 1.52
SFXN1-203ENST00000502393 BCAR3O75815 825 aa24.52■■□□□ 1.52
SFXN1-203ENST00000502393 FKBP1CQ5VVH2 108 aa24.52■■□□□ 1.52
SFXN1-203ENST00000502393 ZNF296Q8WUU4 475 aaPredicted RBP24.52■■□□□ 1.52
SFXN1-203ENST00000502393 TMOD2Q9NZR1 351 aa24.52■■□□□ 1.52
SFXN1-203ENST00000502393 GPR25O00155 361 aa24.51■■□□□ 1.51
SFXN1-203ENST00000502393 MTX1Q13505 466 aa24.51■■□□□ 1.51
SFXN1-203ENST00000502393 MIER1Q8N108 512 aa24.51■■□□□ 1.51
SFXN1-203ENST00000502393 FRAT1Q92837 279 aaPredicted RBP24.51■■□□□ 1.51
SFXN1-203ENST00000502393 SEMA3EO15041 775 aa24.5■■□□□ 1.51
SFXN1-203ENST00000502393 ZBTB22O15209 634 aa24.5■■□□□ 1.51
SFXN1-203ENST00000502393 SRGAP3O43295 1099 aa24.5■■□□□ 1.51
SFXN1-203ENST00000502393 DIEXFQ68CQ4 756 aaKnown RBP24.5■■□□□ 1.51
SFXN1-203ENST00000502393 FAM83AQ86UY5 434 aa24.5■■□□□ 1.51
SFXN1-203ENST00000502393 IFNL1Q8IU54 200 aa24.5■■□□□ 1.51
SFXN1-203ENST00000502393 CDAN1Q8IWY9 1227 aa24.5■■□□□ 1.51
SFXN1-203ENST00000502393 RGS19P49795 217 aa24.49■■□□□ 1.51
SFXN1-203ENST00000502393 CACNB3P54284 484 aa24.49■■□□□ 1.51
SFXN1-203ENST00000502393 DENND2AQ9ULE3 1009 aa24.49■■□□□ 1.51
SFXN1-203ENST00000502393 LAMB1P07942 1786 aa24.48■■□□□ 1.51
SFXN1-203ENST00000502393 HNRNPUQ00839 825 aaKnown RBP eCLIP24.48■■□□□ 1.51
SFXN1-203ENST00000502393 PKN2Q16513 984 aaKnown RBP24.48■■□□□ 1.51
SFXN1-203ENST00000502393 SALL1Q9NSC2 1324 aa24.48■■□□□ 1.51
SFXN1-203ENST00000502393 MYH13Q9UKX3 1938 aa24.48■■□□□ 1.51
SFXN1-203ENST00000502393 GNAI2P04899 355 aa24.47■■□□□ 1.51
SFXN1-203ENST00000502393 GJA5P36382 358 aa24.47■■□□□ 1.51
SFXN1-203ENST00000502393 PHKA1P46020 1223 aa24.47■■□□□ 1.51
SFXN1-203ENST00000502393 MAP3K9P80192 1104 aa24.47■■□□□ 1.51
SFXN1-203ENST00000502393 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.47■■□□□ 1.51
SFXN1-203ENST00000502393 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.47■■□□□ 1.51
SFXN1-203ENST00000502393 HOOK2Q96ED9 719 aa24.47■■□□□ 1.51
SFXN1-203ENST00000502393 ELP3Q9H9T3 547 aa24.47■■□□□ 1.51
SFXN1-203ENST00000502393 AKAP2Q9Y2D5 859 aa24.47■■□□□ 1.51
SFXN1-203ENST00000502393 FKTNO75072 461 aa24.46■■□□□ 1.51
SFXN1-203ENST00000502393 LDHBP07195 334 aaKnown RBP24.46■■□□□ 1.51
SFXN1-203ENST00000502393 CCDC102BQ68D86 513 aa24.46■■□□□ 1.51
SFXN1-203ENST00000502393 OTUD7BQ6GQQ9 843 aa24.46■■□□□ 1.51
SFXN1-203ENST00000502393 CLUAP1Q96AJ1 413 aa24.46■■□□□ 1.51
SFXN1-203ENST00000502393 OPTNQ96CV9 577 aa24.46■■□□□ 1.51
SFXN1-203ENST00000502393 R3HDMLQ9H3Y0 253 aa24.46■■□□□ 1.51
SFXN1-203ENST00000502393 TNNQ9UQP3 1299 aa24.46■■□□□ 1.51
SFXN1-203ENST00000502393 TESPA1A2RU30 521 aaPredicted RBP24.45■■□□□ 1.5
SFXN1-203ENST00000502393 IGF2BP3O00425 579 aaKnown RBP eCLIP24.45■■□□□ 1.5
SFXN1-203ENST00000502393 PRDX5P30044 214 aa24.45■■□□□ 1.5
SFXN1-203ENST00000502393 TIMM10P62072 90 aa24.45■■□□□ 1.5
SFXN1-203ENST00000502393 ZKSCAN2Q63HK3 967 aa24.45■■□□□ 1.5
SFXN1-203ENST00000502393 ZGPATQ8N5A5 531 aaKnown RBP24.45■■□□□ 1.5
SFXN1-203ENST00000502393 DAGLAQ9Y4D2 1042 aa24.45■■□□□ 1.5
SFXN1-203ENST00000502393 CSADQ9Y600 493 aa24.45■■□□□ 1.5
SFXN1-203ENST00000502393 RPAP1Q9BWH6 1393 aaPredicted RBP24.44■■□□□ 1.5
SFXN1-203ENST00000502393 OTOFQ9HC10 1997 aa24.44■■□□□ 1.5
SFXN1-203ENST00000502393 ADORA1P30542 326 aa24.44■■□□□ 1.5
SFXN1-203ENST00000502393 VGLL4Q14135 290 aa24.44■■□□□ 1.5
SFXN1-203ENST00000502393 A0A1B0GUL7 405 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms