RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 BMP3P12645 472 aa4.51□□□□□ -1.69
SMAD1-203ENST00000502342 PREPP48147 710 aa4.51□□□□□ -1.69
SMAD1-203ENST00000502342 FMR1Q06787 632 aaKnown RBP eCLIP4.51□□□□□ -1.69
SMAD1-203ENST00000502342 FDX2Q6P4F2 183 aa4.51□□□□□ -1.69
SMAD1-203ENST00000502342 UTP4Q969X6 686 aaKnown RBP4.51□□□□□ -1.69
SMAD1-203ENST00000502342 CEP41Q9BYV8 373 aa4.51□□□□□ -1.69
SMAD1-203ENST00000502342 SOX17Q9H6I2 414 aaPredicted RBP4.51□□□□□ -1.69
SMAD1-203ENST00000502342 STOML1Q9UBI4 398 aa4.51□□□□□ -1.69
SMAD1-203ENST00000502342 GPN3Q9UHW5 284 aaPredicted RBP4.51□□□□□ -1.69
SMAD1-203ENST00000502342 MEGF11A6BM72 1044 aa4.5□□□□□ -1.69
SMAD1-203ENST00000502342 DHX15O43143 795 aaKnown RBP4.5□□□□□ -1.69
SMAD1-203ENST00000502342 EIF4EBP3O60516 100 aaPredicted RBP4.5□□□□□ -1.69
SMAD1-203ENST00000502342 B3GALT4O96024 378 aa4.5□□□□□ -1.69
SMAD1-203ENST00000502342 CYP11A1P05108 521 aa4.5□□□□□ -1.69
SMAD1-203ENST00000502342 LIG1P18858 919 aa4.5□□□□□ -1.69
SMAD1-203ENST00000502342 RXRBP28702 533 aa4.5□□□□□ -1.69
SMAD1-203ENST00000502342 PDE3AQ14432 1141 aa4.5□□□□□ -1.69
SMAD1-203ENST00000502342 AKAP4Q5JQC9 854 aa4.5□□□□□ -1.69
SMAD1-203ENST00000502342 ALG1LQ6GMV1 187 aa4.5□□□□□ -1.69
SMAD1-203ENST00000502342 PRPF40BQ6NWY9 871 aaKnown RBP4.5□□□□□ -1.69
SMAD1-203ENST00000502342 Q6ZS46 218 aa4.5□□□□□ -1.69
SMAD1-203ENST00000502342 FAM46AQ96IP4 442 aaKnown RBP4.5□□□□□ -1.69
SMAD1-203ENST00000502342 CORO1BQ9BR76 489 aa4.5□□□□□ -1.69
SMAD1-203ENST00000502342 TRIM56Q9BRZ2 755 aaKnown RBP4.5□□□□□ -1.69
SMAD1-203ENST00000502342 TMPRSS13Q9BYE2 586 aa4.5□□□□□ -1.69
SMAD1-203ENST00000502342 CYP4F12Q9HCS2 524 aa4.5□□□□□ -1.69
SMAD1-203ENST00000502342 RAXQ9Y2V3 346 aa4.5□□□□□ -1.69
SMAD1-203ENST00000502342 HMX2A2RU54 273 aa4.49□□□□□ -1.69
SMAD1-203ENST00000502342 GAS2O43903 313 aaKnown RBP4.49□□□□□ -1.69
SMAD1-203ENST00000502342 FBXO24O75426 580 aa4.49□□□□□ -1.69
SMAD1-203ENST00000502342 USP11P51784 963 aa4.49□□□□□ -1.69
SMAD1-203ENST00000502342 TAGLNQ01995 201 aaKnown RBP4.49□□□□□ -1.69
SMAD1-203ENST00000502342 PTPN12Q05209 780 aaKnown RBP4.49□□□□□ -1.69
SMAD1-203ENST00000502342 NFKBIBQ15653 356 aa4.49□□□□□ -1.69
SMAD1-203ENST00000502342 SGO2Q562F6 1265 aa4.49□□□□□ -1.69
SMAD1-203ENST00000502342 EAPPQ56P03 285 aaPredicted RBP4.49□□□□□ -1.69
SMAD1-203ENST00000502342 ZMYM1Q5SVZ6 1142 aa4.49□□□□□ -1.69
SMAD1-203ENST00000502342 TPTE2Q6XPS3 522 aa4.49□□□□□ -1.69
SMAD1-203ENST00000502342 DYMQ7RTS9 669 aa4.49□□□□□ -1.69
SMAD1-203ENST00000502342 TRIM42Q8IWZ5 723 aa4.49□□□□□ -1.69
SMAD1-203ENST00000502342 STK35Q8TDR2 534 aa4.49□□□□□ -1.69
SMAD1-203ENST00000502342 KCNB2Q92953 911 aa4.49□□□□□ -1.69
SMAD1-203ENST00000502342 WDR89Q96FK6 387 aaPredicted RBP4.49□□□□□ -1.69
SMAD1-203ENST00000502342 ZFYVE1Q9HBF4 777 aa4.49□□□□□ -1.69
SMAD1-203ENST00000502342 LGR6Q9HBX8 967 aa4.49□□□□□ -1.69
SMAD1-203ENST00000502342 SOX4Q06945 474 aaPredicted RBP4.48□□□□□ -1.69
SMAD1-203ENST00000502342 RPS26P11Q5JNZ5 115 aaPredicted RBP4.48□□□□□ -1.69
SMAD1-203ENST00000502342 ANKRD34AQ69YU3 496 aa4.48□□□□□ -1.69
SMAD1-203ENST00000502342 CDPF1Q6NVV7 123 aa4.48□□□□□ -1.69
SMAD1-203ENST00000502342 MPRIPQ6WCQ1 1025 aa4.48□□□□□ -1.69
SMAD1-203ENST00000502342 BEND4Q6ZU67 534 aa4.48□□□□□ -1.69
SMAD1-203ENST00000502342 SMG8Q8ND04 991 aaKnown RBP4.48□□□□□ -1.69
SMAD1-203ENST00000502342 FBLIM1Q8WUP2 373 aa4.48□□□□□ -1.69
SMAD1-203ENST00000502342 MYRFLQ96LU7 910 aa4.48□□□□□ -1.69
SMAD1-203ENST00000502342 DUSP9Q99956 384 aaKnown RBP4.48□□□□□ -1.69
SMAD1-203ENST00000502342 NRSN2Q9GZP1 204 aa4.48□□□□□ -1.69
SMAD1-203ENST00000502342 CCDC86Q9H6F5 360 aaKnown RBP4.48□□□□□ -1.69
SMAD1-203ENST00000502342 C7orf69Q9H7B7 122 aa4.48□□□□□ -1.69
SMAD1-203ENST00000502342 CBX8Q9HC52 389 aa4.48□□□□□ -1.69
SMAD1-203ENST00000502342 TMEM39AQ9NV64 488 aa4.48□□□□□ -1.69
SMAD1-203ENST00000502342 SPG7Q9UQ90 795 aa4.48□□□□□ -1.69
SMAD1-203ENST00000502342 ZBTB7CA1YPR0 619 aa4.47□□□□□ -1.69
SMAD1-203ENST00000502342 AOC2O75106 756 aa4.47□□□□□ -1.69
SMAD1-203ENST00000502342 XRCC5P13010 732 aaKnown RBP4.47□□□□□ -1.69
SMAD1-203ENST00000502342 FSTP19883 344 aa4.47□□□□□ -1.69
SMAD1-203ENST00000502342 MAP4P27816 1152 aaKnown RBP4.47□□□□□ -1.69
SMAD1-203ENST00000502342 PPP2R3AQ06190 1150 aa4.47□□□□□ -1.69
SMAD1-203ENST00000502342 HP1BP3Q5SSJ5 553 aaPredicted RBP4.47□□□□□ -1.69
SMAD1-203ENST00000502342 CLEC10AQ8IUN9 316 aa4.47□□□□□ -1.69
SMAD1-203ENST00000502342 HOMEZQ8IX15 550 aa4.47□□□□□ -1.69
SMAD1-203ENST00000502342 FAM20CQ8IXL6 584 aa4.47□□□□□ -1.69
SMAD1-203ENST00000502342 C3orf58Q8NDZ4 430 aa4.47□□□□□ -1.69
SMAD1-203ENST00000502342 GRIN3AQ8TCU5 1115 aa4.47□□□□□ -1.69
SMAD1-203ENST00000502342 FBF1Q8TES7 1133 aa4.47□□□□□ -1.69
SMAD1-203ENST00000502342 PPP1R9AQ9ULJ8 1098 aa4.47□□□□□ -1.69
SMAD1-203ENST00000502342 SCO2A0A1W2PP80 73 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 GIPC1O14908 333 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 ZNF862O60290 1169 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 PAGE1O75459 146 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 TIAF1O95411 115 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 IGLV1-40P01703 118 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 GSTP1P09211 210 aaKnown RBP4.46□□□□□ -1.7
SMAD1-203ENST00000502342 USP17L7P0C7H9 530 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 ARNTP27540 789 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 GSTT1P30711 240 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 ASPAP45381 313 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 AP3B2Q13367 1082 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 CCDC27Q2M243 656 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 MAP1SQ66K74 1059 aaPredicted RBP4.46□□□□□ -1.7
SMAD1-203ENST00000502342 DNAJC14Q6Y2X3 702 aaPredicted RBP4.46□□□□□ -1.7
SMAD1-203ENST00000502342 SHISA5Q8N114 240 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 FBXL6Q8N531 539 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 C2CD4AQ8NCU7 369 aaPredicted RBP4.46□□□□□ -1.7
SMAD1-203ENST00000502342 FAM161BQ96MY7 647 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 FAM83CQ9BQN1 747 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 C12orf49Q9H741 205 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 SUGCTQ9HAC7 445 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 PARP2Q9UGN5 583 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 AP4E1Q9UPM8 1137 aa4.46□□□□□ -1.7
SMAD1-203ENST00000502342 CSADQ9Y600 493 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms