RNA–Protein interactions for RNA: ENST00000502254.5

PTPN20-212, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-212ENST00000502254 MPNDQ8N594 471 aa7.02□□□□□ -1.29
PTPN20-212ENST00000502254 PI4KAP1Q8N8J0 262 aa7.02□□□□□ -1.29
PTPN20-212ENST00000502254 KCTD15Q96SI1 283 aaPredicted RBP7.02□□□□□ -1.29
PTPN20-212ENST00000502254 CCDC87Q9NVE4 849 aa7.02□□□□□ -1.29
PTPN20-212ENST00000502254 ZBTB1Q9Y2K1 713 aa7.02□□□□□ -1.29
PTPN20-212ENST00000502254 IVNS1ABPQ9Y6Y0 642 aa7.02□□□□□ -1.29
PTPN20-212ENST00000502254 ERBB4Q15303 1308 aa7.01□□□□□ -1.29
PTPN20-212ENST00000502254 ERICH6BQ5W0A0 696 aa7.01□□□□□ -1.29
PTPN20-212ENST00000502254 KSR2Q6VAB6 950 aa7.01□□□□□ -1.29
PTPN20-212ENST00000502254 LINC00116Q8NCU8 138 aa7.01□□□□□ -1.29
PTPN20-212ENST00000502254 RGS22Q8NE09 1264 aa7.01□□□□□ -1.29
PTPN20-212ENST00000502254 DNAAF4Q8WXU2 420 aa7.01□□□□□ -1.29
PTPN20-212ENST00000502254 CDK15Q96Q40 435 aa7.01□□□□□ -1.29
PTPN20-212ENST00000502254 PPP4R2Q9NY27 417 aa7.01□□□□□ -1.29
PTPN20-212ENST00000502254 MAP3K2Q9Y2U5 619 aa7.01□□□□□ -1.29
PTPN20-212ENST00000502254 PCDHB11Q9Y5F2 797 aa7.01□□□□□ -1.29
PTPN20-212ENST00000502254 ITGB4P16144 1822 aa7.01□□□□□ -1.29
PTPN20-212ENST00000502254 VIRMAQ69YN4 1812 aaKnown RBP7.01□□□□□ -1.29
PTPN20-212ENST00000502254 PAPPAQ13219 1627 aa7.01□□□□□ -1.29
PTPN20-212ENST00000502254 ABCC4O15439 1325 aa7.01□□□□□ -1.29
PTPN20-212ENST00000502254 CCT4P50991 539 aaKnown RBP7□□□□□ -1.29
PTPN20-212ENST00000502254 INTS6LQ5JSJ4 861 aaKnown RBP7□□□□□ -1.29
PTPN20-212ENST00000502254 CCDC102BQ68D86 513 aa7□□□□□ -1.29
PTPN20-212ENST00000502254 INTS3Q68E01 1043 aaKnown RBP7□□□□□ -1.29
PTPN20-212ENST00000502254 INTS5Q6P9B9 1019 aaKnown RBP7□□□□□ -1.29
PTPN20-212ENST00000502254 KIF6Q6ZMV9 814 aa7□□□□□ -1.29
PTPN20-212ENST00000502254 SMIM5Q71RC9 77 aa7□□□□□ -1.29
PTPN20-212ENST00000502254 LRP10Q7Z4F1 713 aa7□□□□□ -1.29
PTPN20-212ENST00000502254 ZNF594Q96JF6 807 aaPredicted RBP7□□□□□ -1.29
PTPN20-212ENST00000502254 MYD88Q99836 296 aa7□□□□□ -1.29
PTPN20-212ENST00000502254 SRCIN1Q9C0H9 1055 aa7□□□□□ -1.29
PTPN20-212ENST00000502254 DDX19BQ9UMR2 479 aa7□□□□□ -1.29
PTPN20-212ENST00000502254 C5P01031 1676 aa7□□□□□ -1.29
PTPN20-212ENST00000502254 NHSQ6T4R5 1651 aa7□□□□□ -1.29
PTPN20-212ENST00000502254 BRWD3Q6RI45 1802 aa6.99□□□□□ -1.29
PTPN20-212ENST00000502254 ADCY9O60503 1353 aa6.99□□□□□ -1.29
PTPN20-212ENST00000502254 SIAH2O43255 324 aa6.99□□□□□ -1.29
PTPN20-212ENST00000502254 IL6STP40189 918 aaPredicted RBP6.99□□□□□ -1.29
PTPN20-212ENST00000502254 MFAP1P55081 439 aaKnown RBP6.99□□□□□ -1.29
PTPN20-212ENST00000502254 SEC13P55735 322 aa6.99□□□□□ -1.29
PTPN20-212ENST00000502254 NEXNQ0ZGT2 675 aa6.99□□□□□ -1.29
PTPN20-212ENST00000502254 SF3B2Q13435 895 aaKnown RBP6.99□□□□□ -1.29
PTPN20-212ENST00000502254 TXNRD1Q16881 649 aa6.99□□□□□ -1.29
PTPN20-212ENST00000502254 BEND3Q5T5X7 828 aa6.99□□□□□ -1.29
PTPN20-212ENST00000502254 PLBD2Q8NHP8 589 aa6.99□□□□□ -1.29
PTPN20-212ENST00000502254 C1orf216Q8TAB5 229 aa6.99□□□□□ -1.29
PTPN20-212ENST00000502254 EMID1Q96A84 441 aaPredicted RBP6.99□□□□□ -1.29
PTPN20-212ENST00000502254 CCDC136Q96JN2 1154 aa6.99□□□□□ -1.29
PTPN20-212ENST00000502254 LRRC4BQ9NT99 713 aa6.99□□□□□ -1.29
PTPN20-212ENST00000502254 UBR2Q8IWV8 1755 aa6.98□□□□□ -1.29
PTPN20-212ENST00000502254 KAT6BQ8WYB5 2073 aa6.98□□□□□ -1.29
PTPN20-212ENST00000502254 ERVH48-1M5A8F1 160 aa6.98□□□□□ -1.29
PTPN20-212ENST00000502254 CD2BP2O95400 341 aaKnown RBP6.98□□□□□ -1.29
PTPN20-212ENST00000502254 ATP2B4P23634 1241 aa6.98□□□□□ -1.29
PTPN20-212ENST00000502254 ARID4AP29374 1257 aaPredicted RBP6.98□□□□□ -1.29
PTPN20-212ENST00000502254 GRM5P41594 1212 aa6.98□□□□□ -1.29
PTPN20-212ENST00000502254 EIF5P55010 431 aaKnown RBP6.98□□□□□ -1.29
PTPN20-212ENST00000502254 CWF19L2Q2TBE0 894 aaKnown RBP6.98□□□□□ -1.29
PTPN20-212ENST00000502254 SLC27A3Q5K4L6 730 aa6.98□□□□□ -1.29
PTPN20-212ENST00000502254 RC3H1Q5TC82 1133 aaKnown RBP6.98□□□□□ -1.29
PTPN20-212ENST00000502254 IFFO2Q5TF58 517 aa6.98□□□□□ -1.29
PTPN20-212ENST00000502254 LIAT1Q6ZQX7 453 aa6.98□□□□□ -1.29
PTPN20-212ENST00000502254 SND1Q7KZF4 910 aaKnown RBP eCLIP6.98□□□□□ -1.29
PTPN20-212ENST00000502254 VASH1Q7L8A9 365 aaPredicted RBP6.98□□□□□ -1.29
PTPN20-212ENST00000502254 MEIS3Q99687 375 aa6.98□□□□□ -1.29
PTPN20-212ENST00000502254 METTL22Q9BUU2 404 aaPredicted RBP6.98□□□□□ -1.29
PTPN20-212ENST00000502254 CHMP4BQ9H444 224 aaKnown RBP6.98□□□□□ -1.29
PTPN20-212ENST00000502254 CNTNAP4Q9C0A0 1308 aa6.98□□□□□ -1.29
PTPN20-212ENST00000502254 A0A087WZG4 1122 aa6.97□□□□□ -1.29
PTPN20-212ENST00000502254 SFI1A8K8P3 1242 aa6.97□□□□□ -1.29
PTPN20-212ENST00000502254 M0R2N6 131 aa6.97□□□□□ -1.29
PTPN20-212ENST00000502254 PLSCR1O15162 318 aa6.97□□□□□ -1.29
PTPN20-212ENST00000502254 RPS6KA4O75676 772 aa6.97□□□□□ -1.29
PTPN20-212ENST00000502254 ALDH1L1O75891 902 aa6.97□□□□□ -1.29
PTPN20-212ENST00000502254 IGKV5-2P06315 115 aa6.97□□□□□ -1.29
PTPN20-212ENST00000502254 ERVK-9P63128 1117 aa6.97□□□□□ -1.29
PTPN20-212ENST00000502254 HLFQ16534 295 aa6.97□□□□□ -1.29
PTPN20-212ENST00000502254 OCLNQ16625 522 aa6.97□□□□□ -1.29
PTPN20-212ENST00000502254 LINS1Q8NG48 757 aa6.97□□□□□ -1.29
PTPN20-212ENST00000502254 TPCN2Q8NHX9 752 aa6.97□□□□□ -1.29
PTPN20-212ENST00000502254 JARID2Q92833 1246 aaPredicted RBP6.97□□□□□ -1.29
PTPN20-212ENST00000502254 ZBTB40Q9NUA8 1239 aa6.97□□□□□ -1.29
PTPN20-212ENST00000502254 C9orf78Q9NZ63 289 aaPredicted RBP6.97□□□□□ -1.29
PTPN20-212ENST00000502254 RTCBQ9Y3I0 505 aaKnown RBP6.97□□□□□ -1.29
PTPN20-212ENST00000502254 MAP3K15Q6ZN16 1313 aa6.97□□□□□ -1.29
PTPN20-212ENST00000502254 BTAF1O14981 1849 aa6.97□□□□□ -1.29
PTPN20-212ENST00000502254 TJP1Q07157 1748 aa6.96□□□□□ -1.29
PTPN20-212ENST00000502254 LAMB4A4D0S4 1761 aa6.96□□□□□ -1.3
PTPN20-212ENST00000502254 FAM177BA6PVY3 158 aa6.96□□□□□ -1.3
PTPN20-212ENST00000502254 NEURL1BA8MQ27 555 aa6.96□□□□□ -1.3
PTPN20-212ENST00000502254 GNAI3P08754 354 aa6.96□□□□□ -1.3
PTPN20-212ENST00000502254 UBTFL1P0CB47 393 aaPredicted RBP6.96□□□□□ -1.3
PTPN20-212ENST00000502254 GPTP24298 496 aa6.96□□□□□ -1.3
PTPN20-212ENST00000502254 BAG6P46379 1132 aa6.96□□□□□ -1.3
PTPN20-212ENST00000502254 SCTRP47872 440 aa6.96□□□□□ -1.3
PTPN20-212ENST00000502254 TCIRG1Q13488 830 aa6.96□□□□□ -1.3
PTPN20-212ENST00000502254 EZH2Q15910 746 aaKnown RBP6.96□□□□□ -1.3
PTPN20-212ENST00000502254 TAS1R3Q7RTX0 852 aa6.96□□□□□ -1.3
PTPN20-212ENST00000502254 EHBP1Q8NDI1 1231 aa6.96□□□□□ -1.3
PTPN20-212ENST00000502254 USP44Q9H0E7 712 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms