RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 ADORA1P30542 326 aa20.03■□□□□ 0.8
NR1H3-227ENST00000498548 DZIP1LQ8IYY4 767 aaKnown RBP20.03■□□□□ 0.8
NR1H3-227ENST00000498548 TBC1D22AQ8WUA7 517 aa20.03■□□□□ 0.8
NR1H3-227ENST00000498548 ANGEL1Q9UNK9 670 aaKnown RBP20.03■□□□□ 0.8
NR1H3-227ENST00000498548 PNMA6EA0A0J9YXQ4 647 aa20.02■□□□□ 0.8
NR1H3-227ENST00000498548 RLBP1P12271 317 aa20.02■□□□□ 0.8
NR1H3-227ENST00000498548 TIMM10P62072 90 aa20.02■□□□□ 0.8
NR1H3-227ENST00000498548 MKRN3Q13064 507 aaKnown RBP20.02■□□□□ 0.8
NR1H3-227ENST00000498548 NBPF12Q5TAG4 269 aaPredicted RBP20.02■□□□□ 0.8
NR1H3-227ENST00000498548 ARMC9Q7Z3E5 817 aa20.02■□□□□ 0.8
NR1H3-227ENST00000498548 CSRNP1Q96S65 589 aa20.02■□□□□ 0.8
NR1H3-227ENST00000498548 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.02■□□□□ 0.8
NR1H3-227ENST00000498548 CASP8AP2Q9UKL3 1982 aa20.01■□□□□ 0.79
NR1H3-227ENST00000498548 TCP10L2B9ZVM9 353 aa20.01■□□□□ 0.79
NR1H3-227ENST00000498548 PHKA1P46020 1223 aa20.01■□□□□ 0.79
NR1H3-227ENST00000498548 TFCP2Q12800 502 aa20.01■□□□□ 0.79
NR1H3-227ENST00000498548 MTX1Q13505 466 aa20.01■□□□□ 0.79
NR1H3-227ENST00000498548 RASA3Q14644 834 aa20.01■□□□□ 0.79
NR1H3-227ENST00000498548 SPDYE2Q495Y8 402 aa20.01■□□□□ 0.79
NR1H3-227ENST00000498548 C1orf115Q9H7X2 142 aa20.01■□□□□ 0.79
NR1H3-227ENST00000498548 AKAP11Q9UKA4 1901 aa20■□□□□ 0.79
NR1H3-227ENST00000498548 COL1A1P02452 1464 aaPredicted RBP20■□□□□ 0.79
NR1H3-227ENST00000498548 FTSJ3Q8IY81 847 aaKnown RBP20■□□□□ 0.79
NR1H3-227ENST00000498548 SSC5DA1L4H1 1573 aa20■□□□□ 0.79
NR1H3-227ENST00000498548 CACNB3P54284 484 aa19.99■□□□□ 0.79
NR1H3-227ENST00000498548 ITPRIPQ8IWB1 547 aa19.99■□□□□ 0.79
NR1H3-227ENST00000498548 CDAN1Q8IWY9 1227 aa19.99■□□□□ 0.79
NR1H3-227ENST00000498548 TEKT1Q969V4 418 aa19.99■□□□□ 0.79
NR1H3-227ENST00000498548 PPP2R3BQ9Y5P8 575 aa19.99■□□□□ 0.79
NR1H3-227ENST00000498548 CA12O43570 354 aa19.98■□□□□ 0.79
NR1H3-227ENST00000498548 TRPA1O75762 1119 aa19.98■□□□□ 0.79
NR1H3-227ENST00000498548 CCDC102BQ68D86 513 aa19.98■□□□□ 0.79
NR1H3-227ENST00000498548 WDR66Q8TBY9 1149 aa19.98■□□□□ 0.79
NR1H3-227ENST00000498548 GNL3LQ9NVN8 582 aaKnown RBP19.98■□□□□ 0.79
NR1H3-227ENST00000498548 RNF186Q9NXI6 227 aa19.98■□□□□ 0.79
NR1H3-227ENST00000498548 A0A1B0GUL7 405 aa19.97■□□□□ 0.79
NR1H3-227ENST00000498548 HDLBPQ00341 1268 aaKnown RBP19.97■□□□□ 0.79
NR1H3-227ENST00000498548 SUPT20HL1Q3ZLR7 823 aa19.97■□□□□ 0.79
NR1H3-227ENST00000498548 LDLRAD1Q5T700 205 aa19.97■□□□□ 0.79
NR1H3-227ENST00000498548 XAGE2Q96GT9 111 aa19.97■□□□□ 0.79
NR1H3-227ENST00000498548 NEUROD6Q96NK8 337 aa19.97■□□□□ 0.79
NR1H3-227ENST00000498548 ZBTB7BO15156 539 aaPredicted RBP19.96■□□□□ 0.79
NR1H3-227ENST00000498548 USP2O75604 605 aaPredicted RBP19.96■□□□□ 0.79
NR1H3-227ENST00000498548 G3BP1Q13283 466 aaKnown RBP eCLIP19.96■□□□□ 0.79
NR1H3-227ENST00000498548 PANK1Q8TE04 598 aa19.96■□□□□ 0.79
NR1H3-227ENST00000498548 CLMNQ96JQ2 1002 aa19.96■□□□□ 0.79
NR1H3-227ENST00000498548 ZDHHC15Q96MV8 337 aa19.96■□□□□ 0.79
NR1H3-227ENST00000498548 TMEM39BQ9GZU3 492 aa19.96■□□□□ 0.79
NR1H3-227ENST00000498548 PPP1R12BO60237 982 aaPredicted RBP19.95■□□□□ 0.78
NR1H3-227ENST00000498548 PRDX5P30044 214 aa19.95■□□□□ 0.78
NR1H3-227ENST00000498548 ATP8B2P98198 1209 aa19.95■□□□□ 0.78
NR1H3-227ENST00000498548 DIXDC1Q155Q3 683 aa19.95■□□□□ 0.78
NR1H3-227ENST00000498548 APOBEC3HQ6NTF7 200 aaKnown RBP19.95■□□□□ 0.78
NR1H3-227ENST00000498548 SLC10A4Q96EP9 437 aa19.95■□□□□ 0.78
NR1H3-227ENST00000498548 TEPSINQ96N21 525 aa19.95■□□□□ 0.78
NR1H3-227ENST00000498548 MRIQ9BWK5 157 aa19.95■□□□□ 0.78
NR1H3-227ENST00000498548 DENND2AQ9ULE3 1009 aa19.95■□□□□ 0.78
NR1H3-227ENST00000498548 AKAP2Q9Y2D5 859 aa19.95■□□□□ 0.78
NR1H3-227ENST00000498548 SUGT1Q9Y2Z0 365 aa19.95■□□□□ 0.78
NR1H3-227ENST00000498548 TNFAIP1Q13829 316 aa19.94■□□□□ 0.78
NR1H3-227ENST00000498548 MAP3K11Q16584 847 aa19.94■□□□□ 0.78
NR1H3-227ENST00000498548 MAST3O60307 1309 aa19.94■□□□□ 0.78
NR1H3-227ENST00000498548 LDHBP07195 334 aaKnown RBP19.93■□□□□ 0.78
NR1H3-227ENST00000498548 TNNI2P48788 182 aa19.93■□□□□ 0.78
NR1H3-227ENST00000498548 POLA2Q14181 598 aa19.93■□□□□ 0.78
NR1H3-227ENST00000498548 HHIPL2Q6UWX4 724 aa19.93■□□□□ 0.78
NR1H3-227ENST00000498548 SEMA3EO15041 775 aa19.92■□□□□ 0.78
NR1H3-227ENST00000498548 RASGRF1Q13972 1273 aa19.92■□□□□ 0.78
NR1H3-227ENST00000498548 SPRYD7Q5W111 196 aa19.92■□□□□ 0.78
NR1H3-227ENST00000498548 DAGLAQ9Y4D2 1042 aa19.92■□□□□ 0.78
NR1H3-227ENST00000498548 TBC1D8O95759 1140 aa19.91■□□□□ 0.78
NR1H3-227ENST00000498548 IREB2P48200 963 aaKnown RBP19.91■□□□□ 0.78
NR1H3-227ENST00000498548 REM2Q8IYK8 340 aaPredicted RBP19.91■□□□□ 0.78
NR1H3-227ENST00000498548 SSH3Q8TE77 659 aa19.91■□□□□ 0.78
NR1H3-227ENST00000498548 SAGE1Q9NXZ1 904 aa19.91■□□□□ 0.78
NR1H3-227ENST00000498548 TMOD2Q9NZR1 351 aa19.91■□□□□ 0.78
NR1H3-227ENST00000498548 ABCF2Q9UG63 623 aa19.91■□□□□ 0.78
NR1H3-227ENST00000498548 MYH2Q9UKX2 1941 aa19.9■□□□□ 0.78
NR1H3-227ENST00000498548 SURF6O75683 361 aaKnown RBP19.9■□□□□ 0.78
NR1H3-227ENST00000498548 TM4SF4P48230 202 aa19.9■□□□□ 0.78
NR1H3-227ENST00000498548 OS9Q13438 667 aaPredicted RBP19.9■□□□□ 0.78
NR1H3-227ENST00000498548 MVPQ14764 893 aaKnown RBP19.9■□□□□ 0.78
NR1H3-227ENST00000498548 GORABQ5T7V8 394 aa19.9■□□□□ 0.78
NR1H3-227ENST00000498548 CDC42EP5Q6NZY7 148 aa19.9■□□□□ 0.78
NR1H3-227ENST00000498548 WNK4Q96J92 1243 aa19.9■□□□□ 0.78
NR1H3-227ENST00000498548 SALL1Q9NSC2 1324 aa19.9■□□□□ 0.78
NR1H3-227ENST00000498548 GJA5P36382 358 aa19.89■□□□□ 0.77
NR1H3-227ENST00000498548 AK9Q5TCS8 1911 aa19.89■□□□□ 0.77
NR1H3-227ENST00000498548 ELP3Q9H9T3 547 aa19.89■□□□□ 0.77
NR1H3-227ENST00000498548 OTOFQ9HC10 1997 aa19.89■□□□□ 0.77
NR1H3-227ENST00000498548 TCP10Q12799 353 aa19.88■□□□□ 0.77
NR1H3-227ENST00000498548 PI16Q6UXB8 463 aa19.88■□□□□ 0.77
NR1H3-227ENST00000498548 ANKRD13AQ8IZ07 590 aa19.88■□□□□ 0.77
NR1H3-227ENST00000498548 USP40Q9NVE5 1235 aa19.88■□□□□ 0.77
NR1H3-227ENST00000498548 HMG20BQ9P0W2 317 aa19.88■□□□□ 0.77
NR1H3-227ENST00000498548 TBC1D9Q6ZT07 1266 aa19.87■□□□□ 0.77
NR1H3-227ENST00000498548 FAM83AQ86UY5 434 aa19.87■□□□□ 0.77
NR1H3-227ENST00000498548 CNKSR2Q8WXI2 1034 aa19.87■□□□□ 0.77
NR1H3-227ENST00000498548 ABHD8Q96I13 439 aa19.87■□□□□ 0.77
NR1H3-227ENST00000498548 RCAN3Q9UKA8 241 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms