RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 FAM84BQ96KN1 310 aaPredicted RBP17.22■□□□□ 0.35
SHANK2-217ENST00000498519 TMOD2Q9NZR1 351 aa17.22■□□□□ 0.35
SHANK2-217ENST00000498519 SALL2Q9Y467 1007 aaPredicted RBP17.22■□□□□ 0.35
SHANK2-217ENST00000498519 ANP32CO43423 234 aa17.21■□□□□ 0.35
SHANK2-217ENST00000498519 GJA5P36382 358 aa17.21■□□□□ 0.35
SHANK2-217ENST00000498519 TEKT1Q969V4 418 aa17.21■□□□□ 0.35
SHANK2-217ENST00000498519 PTPN18Q99952 460 aa17.21■□□□□ 0.35
SHANK2-217ENST00000498519 MRIQ9BWK5 157 aa17.21■□□□□ 0.35
SHANK2-217ENST00000498519 MAST3O60307 1309 aa17.21■□□□□ 0.34
SHANK2-217ENST00000498519 ZNF646O15015 1829 aaPredicted RBP17.2■□□□□ 0.34
SHANK2-217ENST00000498519 SPEF2Q9C093 1822 aa17.2■□□□□ 0.34
SHANK2-217ENST00000498519 CCL15-CCL14A0A0B4J2E2 113 aa17.2■□□□□ 0.34
SHANK2-217ENST00000498519 TCP10L2B9ZVM9 353 aa17.2■□□□□ 0.34
SHANK2-217ENST00000498519 KIF22Q14807 665 aa17.2■□□□□ 0.34
SHANK2-217ENST00000498519 TAF1CQ15572 869 aaPredicted RBP17.2■□□□□ 0.34
SHANK2-217ENST00000498519 CCL15Q16663 113 aa17.2■□□□□ 0.34
SHANK2-217ENST00000498519 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.2■□□□□ 0.34
SHANK2-217ENST00000498519 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.2■□□□□ 0.34
SHANK2-217ENST00000498519 MS4A4AQ96JQ5 239 aa17.2■□□□□ 0.34
SHANK2-217ENST00000498519 TEPSINQ96N21 525 aa17.2■□□□□ 0.34
SHANK2-217ENST00000498519 ZCCHC17Q9NP64 241 aaKnown RBP17.2■□□□□ 0.34
SHANK2-217ENST00000498519 SUGT1Q9Y2Z0 365 aa17.2■□□□□ 0.34
SHANK2-217ENST00000498519 CETPP11597 493 aa17.19■□□□□ 0.34
SHANK2-217ENST00000498519 VGLL4Q14135 290 aa17.19■□□□□ 0.34
SHANK2-217ENST00000498519 FKBP1CQ5VVH2 108 aa17.19■□□□□ 0.34
SHANK2-217ENST00000498519 FBXO33Q7Z6M2 555 aa17.19■□□□□ 0.34
SHANK2-217ENST00000498519 TMEM39BQ9GZU3 492 aa17.19■□□□□ 0.34
SHANK2-217ENST00000498519 RIPOR2Q9Y4F9 1068 aa17.19■□□□□ 0.34
SHANK2-217ENST00000498519 POTEFA5A3E0 1075 aa17.18■□□□□ 0.34
SHANK2-217ENST00000498519 GNRH1P01148 92 aa17.18■□□□□ 0.34
SHANK2-217ENST00000498519 SLC9C1Q4G0N8 1177 aa17.18■□□□□ 0.34
SHANK2-217ENST00000498519 METTL24Q5JXM2 366 aa17.18■□□□□ 0.34
SHANK2-217ENST00000498519 FAM83AQ86UY5 434 aa17.18■□□□□ 0.34
SHANK2-217ENST00000498519 ERO1BQ86YB8 467 aa17.18■□□□□ 0.34
SHANK2-217ENST00000498519 BRI3BPQ8WY22 251 aa17.18■□□□□ 0.34
SHANK2-217ENST00000498519 UTYO14607 1347 aa17.18■□□□□ 0.34
SHANK2-217ENST00000498519 AOX1Q06278 1338 aa17.18■□□□□ 0.34
SHANK2-217ENST00000498519 SPDYE5A6NIY4 337 aa17.17■□□□□ 0.34
SHANK2-217ENST00000498519 RABL6Q3YEC7 729 aaPredicted RBP17.17■□□□□ 0.34
SHANK2-217ENST00000498519 DCAF15Q66K64 600 aa17.17■□□□□ 0.34
SHANK2-217ENST00000498519 OTUD5Q96G74 571 aa17.17■□□□□ 0.34
SHANK2-217ENST00000498519 SUCLG2Q96I99 432 aa17.17■□□□□ 0.34
SHANK2-217ENST00000498519 ZDHHC15Q96MV8 337 aa17.17■□□□□ 0.34
SHANK2-217ENST00000498519 PUS3Q9BZE2 481 aaKnown RBP17.17■□□□□ 0.34
SHANK2-217ENST00000498519 KIF16BQ96L93 1317 aa17.17■□□□□ 0.34
SHANK2-217ENST00000498519 PDE8BO95263 885 aa17.16■□□□□ 0.34
SHANK2-217ENST00000498519 NBPF7P0C2Y1 421 aaPredicted RBP17.16■□□□□ 0.34
SHANK2-217ENST00000498519 PRMT2P55345 433 aa17.16■□□□□ 0.34
SHANK2-217ENST00000498519 CHAF1AQ13111 956 aaPredicted RBP17.16■□□□□ 0.34
SHANK2-217ENST00000498519 SNAPC2Q13487 334 aa17.16■□□□□ 0.34
SHANK2-217ENST00000498519 ZNF333Q96JL9 665 aa17.16■□□□□ 0.34
SHANK2-217ENST00000498519 HTTP42858 3142 aa17.16■□□□□ 0.34
SHANK2-217ENST00000498519 TLR2O60603 784 aa17.15■□□□□ 0.34
SHANK2-217ENST00000498519 IFIT1P09914 478 aaKnown RBP17.15■□□□□ 0.34
SHANK2-217ENST00000498519 SLC4A8Q2Y0W8 1093 aa17.15■□□□□ 0.34
SHANK2-217ENST00000498519 HABP4Q5JVS0 413 aaKnown RBP17.15■□□□□ 0.34
SHANK2-217ENST00000498519 WRNIP1Q96S55 665 aa17.15■□□□□ 0.34
SHANK2-217ENST00000498519 BICC1Q9H694 974 aaKnown RBP17.15■□□□□ 0.34
SHANK2-217ENST00000498519 PUM3Q15397 648 aaKnown RBP17.14■□□□□ 0.33
SHANK2-217ENST00000498519 HHIPL2Q6UWX4 724 aa17.14■□□□□ 0.33
SHANK2-217ENST00000498519 KAZALD1Q96I82 304 aa17.14■□□□□ 0.33
SHANK2-217ENST00000498519 PTPRCP08575 1304 aa17.14■□□□□ 0.33
SHANK2-217ENST00000498519 EN2P19622 333 aaPredicted RBP17.13■□□□□ 0.33
SHANK2-217ENST00000498519 PPATQ06203 517 aa17.13■□□□□ 0.33
SHANK2-217ENST00000498519 PPIL2Q13356 520 aa17.13■□□□□ 0.33
SHANK2-217ENST00000498519 FAM43AQ8N2R8 423 aa17.13■□□□□ 0.33
SHANK2-217ENST00000498519 WDR66Q8TBY9 1149 aa17.13■□□□□ 0.33
SHANK2-217ENST00000498519 SPINK5Q9NQ38 1064 aaPredicted RBP17.13■□□□□ 0.33
SHANK2-217ENST00000498519 IQSEC3Q9UPP2 1182 aaPredicted RBP17.13■□□□□ 0.33
SHANK2-217ENST00000498519 CACNA1FO60840 1977 aa17.12■□□□□ 0.33
SHANK2-217ENST00000498519 ZEB1P37275 1124 aaPredicted RBP17.12■□□□□ 0.33
SHANK2-217ENST00000498519 LACTBP83111 547 aaPredicted RBP17.12■□□□□ 0.33
SHANK2-217ENST00000498519 CDAN1Q8IWY9 1227 aa17.12■□□□□ 0.33
SHANK2-217ENST00000498519 CNKSR2Q8WXI2 1034 aa17.12■□□□□ 0.33
SHANK2-217ENST00000498519 ZNF341Q9BYN7 854 aa17.12■□□□□ 0.33
SHANK2-217ENST00000498519 PTCH2Q9Y6C5 1203 aa17.12■□□□□ 0.33
SHANK2-217ENST00000498519 SNCAIPQ9Y6H5 919 aa17.12■□□□□ 0.33
SHANK2-217ENST00000498519 RPAP1Q9BWH6 1393 aaPredicted RBP17.12■□□□□ 0.33
SHANK2-217ENST00000498519 HOXD10P28358 340 aa17.11■□□□□ 0.33
SHANK2-217ENST00000498519 BCAMP50895 628 aa17.11■□□□□ 0.33
SHANK2-217ENST00000498519 LRRC24Q50LG9 513 aa17.11■□□□□ 0.33
SHANK2-217ENST00000498519 APOBEC3HQ6NTF7 200 aaKnown RBP17.11■□□□□ 0.33
SHANK2-217ENST00000498519 VGLL2Q8N8G2 317 aa17.11■□□□□ 0.33
SHANK2-217ENST00000498519 ECM29Q5VYK3 1845 aa17.1■□□□□ 0.33
SHANK2-217ENST00000498519 BTBD19C9JJ37 291 aa17.1■□□□□ 0.33
SHANK2-217ENST00000498519 IRF6O14896 467 aa17.1■□□□□ 0.33
SHANK2-217ENST00000498519 SLC5A1P13866 664 aa17.1■□□□□ 0.33
SHANK2-217ENST00000498519 CACNB3P54284 484 aa17.1■□□□□ 0.33
SHANK2-217ENST00000498519 ANKRD44Q8N8A2 993 aa17.1■□□□□ 0.33
SHANK2-217ENST00000498519 LPIN2Q92539 896 aa17.1■□□□□ 0.33
SHANK2-217ENST00000498519 ZKSCAN4Q969J2 545 aaPredicted RBP17.1■□□□□ 0.33
SHANK2-217ENST00000498519 CENPFP49454 3210 aa17.09■□□□□ 0.33
SHANK2-217ENST00000498519 MKI67P46013 3256 aaKnown RBP17.09■□□□□ 0.33
SHANK2-217ENST00000498519 GRIK5Q16478 980 aa17.09■□□□□ 0.33
SHANK2-217ENST00000498519 FAM9BQ8IZU0 186 aa17.09■□□□□ 0.33
SHANK2-217ENST00000498519 NKX2-3Q8TAU0 364 aa17.09■□□□□ 0.33
SHANK2-217ENST00000498519 FAM151AQ8WW52 585 aa17.09■□□□□ 0.33
SHANK2-217ENST00000498519 GNL3LQ9NVN8 582 aaKnown RBP17.09■□□□□ 0.33
SHANK2-217ENST00000498519 HDAC5Q9UQL6 1122 aa17.09■□□□□ 0.33
SHANK2-217ENST00000498519 LAMB1P07942 1786 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms