RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 WDHD1O75717 1129 aaPredicted RBP15.25■□□□□ 0.03
THBS3-209ENST00000498500 GTF2A2P52657 109 aa15.25■□□□□ 0.03
THBS3-209ENST00000498500 FKBP5Q13451 457 aaPredicted RBP15.25■□□□□ 0.03
THBS3-209ENST00000498500 SPDYE2Q495Y8 402 aa15.25■□□□□ 0.03
THBS3-209ENST00000498500 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.25■□□□□ 0.03
THBS3-209ENST00000498500 CNKSR2Q8WXI2 1034 aa15.25■□□□□ 0.03
THBS3-209ENST00000498500 TDRD3Q9H7E2 651 aaKnown RBP15.25■□□□□ 0.03
THBS3-209ENST00000498500 ZNF70Q9UC06 446 aaPredicted RBP15.25■□□□□ 0.03
THBS3-209ENST00000498500 ARAP2Q8WZ64 1704 aa15.24■□□□□ 0.03
THBS3-209ENST00000498500 E9PSI1 815 aa15.24■□□□□ 0.03
THBS3-209ENST00000498500 H0YGN5 161 aa15.24■□□□□ 0.03
THBS3-209ENST00000498500 MAP3K9P80192 1104 aa15.24■□□□□ 0.03
THBS3-209ENST00000498500 SLFN5Q08AF3 891 aa15.24■□□□□ 0.03
THBS3-209ENST00000498500 KIF22Q14807 665 aa15.24■□□□□ 0.03
THBS3-209ENST00000498500 LINS1Q8NG48 757 aa15.24■□□□□ 0.03
THBS3-209ENST00000498500 DNAAF4Q8WXU2 420 aa15.24■□□□□ 0.03
THBS3-209ENST00000498500 TTF2Q9UNY4 1162 aaKnown RBP15.24■□□□□ 0.03
THBS3-209ENST00000498500 CSADQ9Y600 493 aa15.24■□□□□ 0.03
THBS3-209ENST00000498500 CEP290O15078 2479 aa15.23■□□□□ 0.03
THBS3-209ENST00000498500 TCP10L2B9ZVM9 353 aa15.23■□□□□ 0.03
THBS3-209ENST00000498500 TNNI2P48788 182 aa15.23■□□□□ 0.03
THBS3-209ENST00000498500 VGLL4Q14135 290 aa15.23■□□□□ 0.03
THBS3-209ENST00000498500 TAF7LQ5H9L4 462 aa15.23■□□□□ 0.03
THBS3-209ENST00000498500 MFSD14BQ5SR56 506 aa15.23■□□□□ 0.03
THBS3-209ENST00000498500 FAM43AQ8N2R8 423 aa15.23■□□□□ 0.03
THBS3-209ENST00000498500 SH3TC2Q8TF17 1288 aa15.23■□□□□ 0.03
THBS3-209ENST00000498500 OTUD5Q96G74 571 aa15.23■□□□□ 0.03
THBS3-209ENST00000498500 CDCA7LQ96GN5 454 aa15.23■□□□□ 0.03
THBS3-209ENST00000498500 SERPINA10Q9UK55 444 aa15.23■□□□□ 0.03
THBS3-209ENST00000498500 TRIOBPQ9H2D6 2365 aa15.22■□□□□ 0.03
THBS3-209ENST00000498500 FOXO4P98177 505 aa15.22■□□□□ 0.03
THBS3-209ENST00000498500 LDHAL6AQ6ZMR3 332 aa15.22■□□□□ 0.03
THBS3-209ENST00000498500 CDAN1Q8IWY9 1227 aa15.22■□□□□ 0.03
THBS3-209ENST00000498500 DZIP1LQ8IYY4 767 aaKnown RBP15.22■□□□□ 0.03
THBS3-209ENST00000498500 TRMT2AQ8IZ69 625 aaKnown RBP15.22■□□□□ 0.03
THBS3-209ENST00000498500 TEPSINQ96N21 525 aa15.22■□□□□ 0.03
THBS3-209ENST00000498500 TMEM39BQ9GZU3 492 aa15.22■□□□□ 0.03
THBS3-209ENST00000498500 CNNM1Q9NRU3 951 aa15.22■□□□□ 0.03
THBS3-209ENST00000498500 FAM205AQ6ZU69 1335 aa15.21■□□□□ 0.03
THBS3-209ENST00000498500 CCDC57Q2TAC2 916 aa15.21■□□□□ 0.03
THBS3-209ENST00000498500 CHRDL2Q6WN34 429 aa15.21■□□□□ 0.03
THBS3-209ENST00000498500 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.21■□□□□ 0.03
THBS3-209ENST00000498500 ZNF594Q96JF6 807 aaPredicted RBP15.21■□□□□ 0.03
THBS3-209ENST00000498500 ARHGAP39Q9C0H5 1083 aa15.21■□□□□ 0.03
THBS3-209ENST00000498500 TLR2O60603 784 aa15.2■□□□□ 0.02
THBS3-209ENST00000498500 ECM2O94769 699 aaPredicted RBP15.2■□□□□ 0.02
THBS3-209ENST00000498500 CETPP11597 493 aa15.2■□□□□ 0.02
THBS3-209ENST00000498500 CRKP46108 304 aa15.2■□□□□ 0.02
THBS3-209ENST00000498500 LACTBP83111 547 aaPredicted RBP15.2■□□□□ 0.02
THBS3-209ENST00000498500 LMBR1LQ6UX01 489 aa15.2■□□□□ 0.02
THBS3-209ENST00000498500 TDRD7Q8NHU6 1098 aaKnown RBP15.2■□□□□ 0.02
THBS3-209ENST00000498500 DPF3Q92784 378 aa15.2■□□□□ 0.02
THBS3-209ENST00000498500 AK9Q5TCS8 1911 aa15.19■□□□□ 0.02
THBS3-209ENST00000498500 GNRH1P01148 92 aa15.19■□□□□ 0.02
THBS3-209ENST00000498500 HIBADHP31937 336 aaKnown RBP15.19■□□□□ 0.02
THBS3-209ENST00000498500 GYG1P46976 350 aa15.19■□□□□ 0.02
THBS3-209ENST00000498500 SZT2Q5T011 3432 aa15.18■□□□□ 0.02
THBS3-209ENST00000498500 SPDYE5A6NIY4 337 aa15.18■□□□□ 0.02
THBS3-209ENST00000498500 BTBD19C9JJ37 291 aa15.18■□□□□ 0.02
THBS3-209ENST00000498500 F6X3S4 739 aa15.18■□□□□ 0.02
THBS3-209ENST00000498500 PRMT2P55345 433 aa15.18■□□□□ 0.02
THBS3-209ENST00000498500 UBE4AQ14139 1066 aa15.18■□□□□ 0.02
THBS3-209ENST00000498500 ERO1BQ86YB8 467 aa15.18■□□□□ 0.02
THBS3-209ENST00000498500 ZCCHC17Q9NP64 241 aaKnown RBP15.18■□□□□ 0.02
THBS3-209ENST00000498500 SNAPC2Q13487 334 aa15.17■□□□□ 0.02
THBS3-209ENST00000498500 MTFR1Q15390 333 aa15.17■□□□□ 0.02
THBS3-209ENST00000498500 MRPL50Q8N5N7 158 aaKnown RBP15.17■□□□□ 0.02
THBS3-209ENST00000498500 ZKSCAN4Q969J2 545 aaPredicted RBP15.17■□□□□ 0.02
THBS3-209ENST00000498500 FAM84BQ96KN1 310 aaPredicted RBP15.17■□□□□ 0.02
THBS3-209ENST00000498500 WRNIP1Q96S55 665 aa15.17■□□□□ 0.02
THBS3-209ENST00000498500 SNCAIPQ9Y6H5 919 aa15.17■□□□□ 0.02
THBS3-209ENST00000498500 IRF6O14896 467 aa15.16■□□□□ 0.02
THBS3-209ENST00000498500 CACNB3P54284 484 aa15.16■□□□□ 0.02
THBS3-209ENST00000498500 EPHA10Q5JZY3 1008 aa15.16■□□□□ 0.02
THBS3-209ENST00000498500 BEND3Q5T5X7 828 aa15.16■□□□□ 0.02
THBS3-209ENST00000498500 VPS37DQ86XT2 251 aa15.16■□□□□ 0.02
THBS3-209ENST00000498500 TMOD2Q9NZR1 351 aa15.16■□□□□ 0.02
THBS3-209ENST00000498500 RBM27Q9P2N5 1060 aaKnown RBP15.16■□□□□ 0.02
THBS3-209ENST00000498500 MGAMO43451 1857 aa15.15■□□□□ 0.02
THBS3-209ENST00000498500 FRAT2O75474 233 aaPredicted RBP15.15■□□□□ 0.02
THBS3-209ENST00000498500 HOXD10P28358 340 aa15.15■□□□□ 0.02
THBS3-209ENST00000498500 CHAF1AQ13111 956 aaPredicted RBP15.15■□□□□ 0.02
THBS3-209ENST00000498500 NKX2-3Q8TAU0 364 aa15.15■□□□□ 0.02
THBS3-209ENST00000498500 RAET1EQ8TD07 263 aa15.15■□□□□ 0.02
THBS3-209ENST00000498500 SSH1Q8WYL5 1049 aa15.15■□□□□ 0.02
THBS3-209ENST00000498500 TEKT1Q969V4 418 aa15.15■□□□□ 0.02
THBS3-209ENST00000498500 SHISA4Q96DD7 197 aa15.15■□□□□ 0.02
THBS3-209ENST00000498500 HOOK2Q96ED9 719 aa15.15■□□□□ 0.02
THBS3-209ENST00000498500 CPA4Q9UI42 421 aa15.15■□□□□ 0.02
THBS3-209ENST00000498500 IQSEC3Q9UPP2 1182 aaPredicted RBP15.15■□□□□ 0.02
THBS3-209ENST00000498500 GRM8O00222 908 aa15.14■□□□□ 0.01
THBS3-209ENST00000498500 FMNL1O95466 1100 aaPredicted RBP15.14■□□□□ 0.01
THBS3-209ENST00000498500 PSMC4P43686 418 aa15.14■□□□□ 0.01
THBS3-209ENST00000498500 HDLBPQ00341 1268 aaKnown RBP15.14■□□□□ 0.01
THBS3-209ENST00000498500 PPIL2Q13356 520 aa15.14■□□□□ 0.01
THBS3-209ENST00000498500 GRIK5Q16478 980 aa15.14■□□□□ 0.01
THBS3-209ENST00000498500 HTATIP2Q9BUP3 242 aa15.14■□□□□ 0.01
THBS3-209ENST00000498500 C9orf78Q9NZ63 289 aaPredicted RBP15.14■□□□□ 0.01
THBS3-209ENST00000498500 BIN2Q9UBW5 565 aaPredicted RBP15.14■□□□□ 0.01
THBS3-209ENST00000498500 SRRDQ9UH36 339 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms