RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 SERPINA10Q9UK55 444 aa20.37■□□□□ 0.85
MUC1-220ENST00000498431 TCP10L2B9ZVM9 353 aa20.36■□□□□ 0.85
MUC1-220ENST00000498431 HIBADHP31937 336 aaKnown RBP20.36■□□□□ 0.85
MUC1-220ENST00000498431 SP3Q02447 781 aa20.36■□□□□ 0.85
MUC1-220ENST00000498431 TNFAIP1Q13829 316 aa20.36■□□□□ 0.85
MUC1-220ENST00000498431 UBE4AQ14139 1066 aa20.36■□□□□ 0.85
MUC1-220ENST00000498431 DZIP1LQ8IYY4 767 aaKnown RBP20.36■□□□□ 0.85
MUC1-220ENST00000498431 KAZALD1Q96I82 304 aa20.36■□□□□ 0.85
MUC1-220ENST00000498431 TMEM39BQ9GZU3 492 aa20.36■□□□□ 0.85
MUC1-220ENST00000498431 BRI3BPQ8WY22 251 aa20.35■□□□□ 0.85
MUC1-220ENST00000498431 ARMC5Q96C12 935 aa20.35■□□□□ 0.85
MUC1-220ENST00000498431 SUCLG2Q96I99 432 aa20.35■□□□□ 0.85
MUC1-220ENST00000498431 C9orf78Q9NZ63 289 aaPredicted RBP20.35■□□□□ 0.85
MUC1-220ENST00000498431 EN2P19622 333 aaPredicted RBP20.34■□□□□ 0.85
MUC1-220ENST00000498431 CRKP46108 304 aa20.34■□□□□ 0.85
MUC1-220ENST00000498431 SLC4A10Q6U841 1118 aa20.34■□□□□ 0.85
MUC1-220ENST00000498431 MRS2Q9HD23 443 aa20.34■□□□□ 0.85
MUC1-220ENST00000498431 IQSEC3Q9UPP2 1182 aaPredicted RBP20.34■□□□□ 0.85
MUC1-220ENST00000498431 VGLL4Q14135 290 aa20.33■□□□□ 0.85
MUC1-220ENST00000498431 RIPOR2Q9Y4F9 1068 aa20.33■□□□□ 0.85
MUC1-220ENST00000498431 CCL15-CCL14A0A0B4J2E2 113 aa20.32■□□□□ 0.84
MUC1-220ENST00000498431 ALDH1L1O75891 902 aa20.32■□□□□ 0.84
MUC1-220ENST00000498431 CCL15Q16663 113 aa20.32■□□□□ 0.84
MUC1-220ENST00000498431 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.32■□□□□ 0.84
MUC1-220ENST00000498431 ZSWIM8A7E2V4 1837 aa20.32■□□□□ 0.84
MUC1-220ENST00000498431 NBPF7P0C2Y1 421 aaPredicted RBP20.31■□□□□ 0.84
MUC1-220ENST00000498431 CACNB3P54284 484 aa20.31■□□□□ 0.84
MUC1-220ENST00000498431 TAF1CQ15572 869 aaPredicted RBP20.31■□□□□ 0.84
MUC1-220ENST00000498431 HABP4Q5JVS0 413 aaKnown RBP20.31■□□□□ 0.84
MUC1-220ENST00000498431 FBXO33Q7Z6M2 555 aa20.31■□□□□ 0.84
MUC1-220ENST00000498431 FAM43AQ8N2R8 423 aa20.31■□□□□ 0.84
MUC1-220ENST00000498431 GCC1Q96CN9 775 aa20.31■□□□□ 0.84
MUC1-220ENST00000498431 SRCIN1Q9C0H9 1055 aa20.31■□□□□ 0.84
MUC1-220ENST00000498431 MAP3K9P80192 1104 aa20.3■□□□□ 0.84
MUC1-220ENST00000498431 CHAF1AQ13111 956 aaPredicted RBP20.3■□□□□ 0.84
MUC1-220ENST00000498431 OTUD5Q96G74 571 aa20.3■□□□□ 0.84
MUC1-220ENST00000498431 ZNF333Q96JL9 665 aa20.3■□□□□ 0.84
MUC1-220ENST00000498431 PTCH2Q9Y6C5 1203 aa20.3■□□□□ 0.84
MUC1-220ENST00000498431 GTF2A2P52657 109 aa20.29■□□□□ 0.84
MUC1-220ENST00000498431 LRRC24Q50LG9 513 aa20.29■□□□□ 0.84
MUC1-220ENST00000498431 BICC1Q9H694 974 aaKnown RBP20.29■□□□□ 0.84
MUC1-220ENST00000498431 MROH5Q6ZUA9 1318 aa20.28■□□□□ 0.84
MUC1-220ENST00000498431 TNNI2P48788 182 aa20.28■□□□□ 0.84
MUC1-220ENST00000498431 ZFYVE28Q9HCC9 887 aa20.28■□□□□ 0.84
MUC1-220ENST00000498431 CSADQ9Y600 493 aa20.28■□□□□ 0.84
MUC1-220ENST00000498431 SNCAIPQ9Y6H5 919 aa20.28■□□□□ 0.84
MUC1-220ENST00000498431 VPS37DQ86XT2 251 aa20.27■□□□□ 0.84
MUC1-220ENST00000498431 ANKRD44Q8N8A2 993 aa20.27■□□□□ 0.84
MUC1-220ENST00000498431 VGLL2Q8N8G2 317 aa20.27■□□□□ 0.84
MUC1-220ENST00000498431 ARHGAP39Q9C0H5 1083 aa20.27■□□□□ 0.84
MUC1-220ENST00000498431 UTYO14607 1347 aa20.27■□□□□ 0.83
MUC1-220ENST00000498431 SPDYE5A6NIY4 337 aa20.26■□□□□ 0.83
MUC1-220ENST00000498431 RABL6Q3YEC7 729 aaPredicted RBP20.26■□□□□ 0.83
MUC1-220ENST00000498431 SLC9C1Q4G0N8 1177 aa20.26■□□□□ 0.83
MUC1-220ENST00000498431 ZKSCAN4Q969J2 545 aaPredicted RBP20.26■□□□□ 0.83
MUC1-220ENST00000498431 MYCP01106 439 aaPredicted RBP20.25■□□□□ 0.83
MUC1-220ENST00000498431 BCAMP50895 628 aa20.25■□□□□ 0.83
MUC1-220ENST00000498431 HDLBPQ00341 1268 aaKnown RBP20.25■□□□□ 0.83
MUC1-220ENST00000498431 METTL24Q5JXM2 366 aa20.25■□□□□ 0.83
MUC1-220ENST00000498431 KLHDC4Q8TBB5 520 aa20.25■□□□□ 0.83
MUC1-220ENST00000498431 TEKT1Q969V4 418 aa20.25■□□□□ 0.83
MUC1-220ENST00000498431 WRNIP1Q96S55 665 aa20.25■□□□□ 0.83
MUC1-220ENST00000498431 TMEM106CQ9BVX2 250 aa20.25■□□□□ 0.83
MUC1-220ENST00000498431 BTBD19C9JJ37 291 aa20.24■□□□□ 0.83
MUC1-220ENST00000498431 FRAT2O75474 233 aaPredicted RBP20.24■□□□□ 0.83
MUC1-220ENST00000498431 APOBEC3HQ6NTF7 200 aaKnown RBP20.24■□□□□ 0.83
MUC1-220ENST00000498431 TBC1D22AQ8WUA7 517 aa20.24■□□□□ 0.83
MUC1-220ENST00000498431 ZDHHC15Q96MV8 337 aa20.24■□□□□ 0.83
MUC1-220ENST00000498431 IRF6O14896 467 aa20.23■□□□□ 0.83
MUC1-220ENST00000498431 PDE8BO95263 885 aa20.23■□□□□ 0.83
MUC1-220ENST00000498431 CAVIN4Q5BKX8 364 aa20.23■□□□□ 0.83
MUC1-220ENST00000498431 ERO1BQ86YB8 467 aa20.23■□□□□ 0.83
MUC1-220ENST00000498431 TLR2O60603 784 aa20.22■□□□□ 0.83
MUC1-220ENST00000498431 CETPP11597 493 aa20.22■□□□□ 0.83
MUC1-220ENST00000498431 NBPF11Q86T75 865 aa20.22■□□□□ 0.83
MUC1-220ENST00000498431 FAM83AQ86UY5 434 aa20.22■□□□□ 0.83
MUC1-220ENST00000498431 SH3TC2Q8TF17 1288 aa20.22■□□□□ 0.83
MUC1-220ENST00000498431 ECM2O94769 699 aaPredicted RBP20.21■□□□□ 0.83
MUC1-220ENST00000498431 LACTBP83111 547 aaPredicted RBP20.21■□□□□ 0.83
MUC1-220ENST00000498431 ARHGEF6Q15052 776 aa20.21■□□□□ 0.83
MUC1-220ENST00000498431 SLC4A8Q2Y0W8 1093 aa20.21■□□□□ 0.83
MUC1-220ENST00000498431 FGFR2P21802 821 aa20.2■□□□□ 0.82
MUC1-220ENST00000498431 FXR1P51114 621 aaKnown RBP eCLIP20.2■□□□□ 0.82
MUC1-220ENST00000498431 PPIL2Q13356 520 aa20.2■□□□□ 0.82
MUC1-220ENST00000498431 SNAPC2Q13487 334 aa20.2■□□□□ 0.82
MUC1-220ENST00000498431 FKBP1CQ5VVH2 108 aa20.2■□□□□ 0.82
MUC1-220ENST00000498431 MIGA2Q7L4E1 593 aa20.2■□□□□ 0.82
MUC1-220ENST00000498431 MRIQ9BWK5 157 aa20.2■□□□□ 0.82
MUC1-220ENST00000498431 TMOD2Q9NZR1 351 aa20.2■□□□□ 0.82
MUC1-220ENST00000498431 CEP290O15078 2479 aa20.2■□□□□ 0.82
MUC1-220ENST00000498431 SZT2Q5T011 3432 aa20.19■□□□□ 0.82
MUC1-220ENST00000498431 CTGFP29279 349 aa20.19■□□□□ 0.82
MUC1-220ENST00000498431 INPP5BP32019 993 aa20.19■□□□□ 0.82
MUC1-220ENST00000498431 MRPL50Q8N5N7 158 aaKnown RBP20.19■□□□□ 0.82
MUC1-220ENST00000498431 ZCCHC17Q9NP64 241 aaKnown RBP20.19■□□□□ 0.82
MUC1-220ENST00000498431 MYH13Q9UKX3 1938 aa20.19■□□□□ 0.82
MUC1-220ENST00000498431 RPAP1Q9BWH6 1393 aaPredicted RBP20.19■□□□□ 0.82
MUC1-220ENST00000498431 ANP32CO43423 234 aa20.18■□□□□ 0.82
MUC1-220ENST00000498431 HHIPL2Q6UWX4 724 aa20.18■□□□□ 0.82
MUC1-220ENST00000498431 FAM9BQ8IZU0 186 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms