RNA–Protein interactions for RNA: ENST00000497873.1

PAXBP1-209, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 2

Gene PAXBP1, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-209ENST00000497873 PPP2R3AQ06190 1150 aa8.84□□□□□ -0.99
PAXBP1-209ENST00000497873 SEPT6Q14141 434 aa8.84□□□□□ -0.99
PAXBP1-209ENST00000497873 FAM169BQ8N8A8 192 aa8.84□□□□□ -0.99
PAXBP1-209ENST00000497873 GATAD2BQ8WXI9 593 aa8.84□□□□□ -0.99
PAXBP1-209ENST00000497873 ROBO2Q9HCK4 1378 aa8.84□□□□□ -0.99
PAXBP1-209ENST00000497873 FAM182BQ5T319 152 aa8.84□□□□□ -0.99
PAXBP1-209ENST00000497873 BSNDQ8WZ55 320 aa8.84□□□□□ -0.99
PAXBP1-209ENST00000497873 DEPDC7Q96QD5 511 aa8.84□□□□□ -0.99
PAXBP1-209ENST00000497873 RBSNQ9H1K0 784 aa8.84□□□□□ -0.99
PAXBP1-209ENST00000497873 ADAMTSL4Q6UY14 1074 aa8.83□□□□□ -1
PAXBP1-209ENST00000497873 SYT9Q86SS6 491 aa8.83□□□□□ -1
PAXBP1-209ENST00000497873 FERD3LQ96RJ6 166 aa8.83□□□□□ -1
PAXBP1-209ENST00000497873 FAM221AA4D161 298 aa8.83□□□□□ -1
PAXBP1-209ENST00000497873 GPR25O00155 361 aa8.83□□□□□ -1
PAXBP1-209ENST00000497873 SMNDC1O75940 238 aaKnown RBP eCLIP8.83□□□□□ -1
PAXBP1-209ENST00000497873 ITGA6P23229 1130 aa8.83□□□□□ -1
PAXBP1-209ENST00000497873 HSD3B2P26439 372 aa8.83□□□□□ -1
PAXBP1-209ENST00000497873 EIF6P56537 245 aaKnown RBP8.83□□□□□ -1
PAXBP1-209ENST00000497873 PCDH1Q08174 1060 aa8.83□□□□□ -1
PAXBP1-209ENST00000497873 STK35Q8TDR2 534 aa8.83□□□□□ -1
PAXBP1-209ENST00000497873 PHF24Q9UPV7 400 aa8.83□□□□□ -1
PAXBP1-209ENST00000497873 SAMM50Q9Y512 469 aa8.83□□□□□ -1
PAXBP1-209ENST00000497873 CPB1P15086 417 aa8.82□□□□□ -1
PAXBP1-209ENST00000497873 RASA3Q14644 834 aa8.82□□□□□ -1
PAXBP1-209ENST00000497873 ZNF423Q2M1K9 1284 aa8.82□□□□□ -1
PAXBP1-209ENST00000497873 CWF19L2Q2TBE0 894 aaKnown RBP8.82□□□□□ -1
PAXBP1-209ENST00000497873 KANK3Q6NY19 840 aa8.82□□□□□ -1
PAXBP1-209ENST00000497873 CCDC84Q86UT8 332 aaPredicted RBP8.82□□□□□ -1
PAXBP1-209ENST00000497873 GRIN3AQ8TCU5 1115 aa8.82□□□□□ -1
PAXBP1-209ENST00000497873 RNPC3Q96LT9 517 aaKnown RBP8.82□□□□□ -1
PAXBP1-209ENST00000497873 LRRC3Q9BY71 257 aa8.82□□□□□ -1
PAXBP1-209ENST00000497873 CBX8Q9HC52 389 aa8.82□□□□□ -1
PAXBP1-209ENST00000497873 AAASQ9NRG9 546 aa8.82□□□□□ -1
PAXBP1-209ENST00000497873 GFRA3O60609 400 aa8.82□□□□□ -1
PAXBP1-209ENST00000497873 MPP2Q14168 576 aa8.82□□□□□ -1
PAXBP1-209ENST00000497873 GK5Q6ZS86 529 aa8.82□□□□□ -1
PAXBP1-209ENST00000497873 CELF2-AS1Q8N7Q2 184 aa8.82□□□□□ -1
PAXBP1-209ENST00000497873 GMCL1Q96IK5 515 aa8.82□□□□□ -1
PAXBP1-209ENST00000497873 CRBNQ96SW2 442 aa8.82□□□□□ -1
PAXBP1-209ENST00000497873 BRMS1Q9HCU9 246 aa8.82□□□□□ -1
PAXBP1-209ENST00000497873 ST7Q9NRC1 585 aa8.82□□□□□ -1
PAXBP1-209ENST00000497873 NME2P22392 152 aa8.81□□□□□ -1
PAXBP1-209ENST00000497873 FAM35AQ86V20 835 aa8.81□□□□□ -1
PAXBP1-209ENST00000497873 SULF2Q8IWU5 870 aa8.81□□□□□ -1
PAXBP1-209ENST00000497873 MICALL1Q8N3F8 863 aa8.81□□□□□ -1
PAXBP1-209ENST00000497873 CYP8B1Q9UNU6 501 aa8.81□□□□□ -1
PAXBP1-209ENST00000497873 CLSTN1O94985 981 aa8.8□□□□□ -1
PAXBP1-209ENST00000497873 PCSK7Q16549 785 aa8.8□□□□□ -1
PAXBP1-209ENST00000497873 TNNI3KQ59H18 835 aa8.8□□□□□ -1
PAXBP1-209ENST00000497873 VN1R5Q7Z5H4 357 aa8.8□□□□□ -1
PAXBP1-209ENST00000497873 WIZO95785 1651 aa8.8□□□□□ -1
PAXBP1-209ENST00000497873 TOP2AP11388 1531 aaKnown RBP8.8□□□□□ -1
PAXBP1-209ENST00000497873 CILPO75339 1184 aa8.8□□□□□ -1
PAXBP1-209ENST00000497873 B3GALT4O96024 378 aa8.8□□□□□ -1
PAXBP1-209ENST00000497873 GIPRP48546 466 aa8.8□□□□□ -1
PAXBP1-209ENST00000497873 ZNF165P49910 485 aa8.8□□□□□ -1
PAXBP1-209ENST00000497873 PCBP4P57723 403 aaKnown RBP8.8□□□□□ -1
PAXBP1-209ENST00000497873 LACRTQ9GZZ8 138 aa8.8□□□□□ -1
PAXBP1-209ENST00000497873 CLCQ05315 142 aa8.79□□□□□ -1
PAXBP1-209ENST00000497873 REC114Q7Z4M0 266 aa8.79□□□□□ -1
PAXBP1-209ENST00000497873 GPATCH3Q96I76 525 aa8.79□□□□□ -1
PAXBP1-209ENST00000497873 SOX13Q9UN79 622 aa8.79□□□□□ -1
PAXBP1-209ENST00000497873 LLGL2Q6P1M3 1020 aa8.79□□□□□ -1
PAXBP1-209ENST00000497873 SMARCA2P51531 1590 aa8.78□□□□□ -1
PAXBP1-209ENST00000497873 C2CD2LO14523 706 aa8.78□□□□□ -1
PAXBP1-209ENST00000497873 BPNT1O95861 308 aa8.78□□□□□ -1
PAXBP1-209ENST00000497873 LRRC14Q15048 493 aa8.78□□□□□ -1
PAXBP1-209ENST00000497873 ZNF468Q5VIY5 522 aaPredicted RBP8.78□□□□□ -1
PAXBP1-209ENST00000497873 TRERF1Q96PN7 1200 aa8.78□□□□□ -1
PAXBP1-209ENST00000497873 SH2B1Q9NRF2 756 aaPredicted RBP8.78□□□□□ -1
PAXBP1-209ENST00000497873 TRIM33Q9UPN9 1127 aa8.78□□□□□ -1
PAXBP1-209ENST00000497873 CDC14CA4D256 554 aa8.78□□□□□ -1
PAXBP1-209ENST00000497873 PTPRAP18433 802 aa8.78□□□□□ -1
PAXBP1-209ENST00000497873 ARNTP27540 789 aa8.78□□□□□ -1
PAXBP1-209ENST00000497873 CHMP4BP1P59074 171 aa8.78□□□□□ -1
PAXBP1-209ENST00000497873 PTPN11Q06124 597 aaPredicted RBP8.78□□□□□ -1
PAXBP1-209ENST00000497873 PERM1Q5SV97 790 aa8.78□□□□□ -1
PAXBP1-209ENST00000497873 MPRIPQ6WCQ1 1025 aa8.78□□□□□ -1
PAXBP1-209ENST00000497873 SMG9Q9H0W8 520 aaKnown RBP8.78□□□□□ -1
PAXBP1-209ENST00000497873 KANSL2Q9H9L4 492 aa8.78□□□□□ -1
PAXBP1-209ENST00000497873 ACTR10Q9NZ32 417 aa8.78□□□□□ -1
PAXBP1-209ENST00000497873 NRG2O14511 850 aaPredicted RBP8.77□□□□□ -1.01
PAXBP1-209ENST00000497873 FOXR1Q6PIV2 292 aa8.77□□□□□ -1.01
PAXBP1-209ENST00000497873 GAL3ST3Q96A11 431 aa8.77□□□□□ -1.01
PAXBP1-209ENST00000497873 DNAJC7Q99615 494 aa8.77□□□□□ -1.01
PAXBP1-209ENST00000497873 TNKS2Q9H2K2 1166 aa8.77□□□□□ -1.01
PAXBP1-209ENST00000497873 ENPP3O14638 875 aa8.77□□□□□ -1.01
PAXBP1-209ENST00000497873 RGS20O76081 388 aa8.77□□□□□ -1.01
PAXBP1-209ENST00000497873 TRIM37O94972 964 aa8.77□□□□□ -1.01
PAXBP1-209ENST00000497873 ESRRAP11474 423 aaPredicted RBP8.77□□□□□ -1.01
PAXBP1-209ENST00000497873 ELMSAN1Q6PJG2 1045 aa8.77□□□□□ -1.01
PAXBP1-209ENST00000497873 LRP10Q7Z4F1 713 aa8.77□□□□□ -1.01
PAXBP1-209ENST00000497873 REXO1Q8N1G1 1221 aaKnown RBP8.77□□□□□ -1.01
PAXBP1-209ENST00000497873 NAGPAQ9UK23 515 aa8.77□□□□□ -1.01
PAXBP1-209ENST00000497873 ZNRF3Q9ULT6 936 aa8.77□□□□□ -1.01
PAXBP1-209ENST00000497873 SLC6A14Q9UN76 642 aa8.77□□□□□ -1.01
PAXBP1-209ENST00000497873 SIN3BO75182 1162 aa8.76□□□□□ -1.01
PAXBP1-209ENST00000497873 BMP4P12644 408 aa8.76□□□□□ -1.01
PAXBP1-209ENST00000497873 DDR2Q16832 855 aa8.76□□□□□ -1.01
PAXBP1-209ENST00000497873 SH3TC2Q8TF17 1288 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms