RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 CALD1Q05682 793 aaKnown RBP21.09■□□□□ 0.97
VIM-208ENST00000497849 SLC17A8Q8NDX2 589 aa21.09■□□□□ 0.97
VIM-208ENST00000497849 TMEM39BQ9GZU3 492 aa21.09■□□□□ 0.97
VIM-208ENST00000497849 LAMA3Q16787 3333 aa21.09■□□□□ 0.97
VIM-208ENST00000497849 KIF22Q14807 665 aa21.08■□□□□ 0.97
VIM-208ENST00000497849 UBE2Q1Q7Z7E8 422 aa21.08■□□□□ 0.97
VIM-208ENST00000497849 FAM205AQ6ZU69 1335 aa21.07■□□□□ 0.96
VIM-208ENST00000497849 SPDYE5A6NIY4 337 aa21.07■□□□□ 0.96
VIM-208ENST00000497849 TCP10L2B9ZVM9 353 aa21.07■□□□□ 0.96
VIM-208ENST00000497849 BTBD19C9JJ37 291 aa21.07■□□□□ 0.96
VIM-208ENST00000497849 GNRH1P01148 92 aa21.07■□□□□ 0.96
VIM-208ENST00000497849 CTGFP29279 349 aa21.07■□□□□ 0.96
VIM-208ENST00000497849 SERPINA10Q9UK55 444 aa21.07■□□□□ 0.96
VIM-208ENST00000497849 TTF2Q9UNY4 1162 aaKnown RBP21.07■□□□□ 0.96
VIM-208ENST00000497849 CSADQ9Y600 493 aa21.07■□□□□ 0.96
VIM-208ENST00000497849 CUL9Q8IWT3 2517 aa21.07■□□□□ 0.96
VIM-208ENST00000497849 PRMT2P55345 433 aa21.06■□□□□ 0.96
VIM-208ENST00000497849 DZIP1LQ8IYY4 767 aaKnown RBP21.06■□□□□ 0.96
VIM-208ENST00000497849 STK31Q9BXU1 1019 aa21.06■□□□□ 0.96
VIM-208ENST00000497849 ZCCHC17Q9NP64 241 aaKnown RBP21.06■□□□□ 0.96
VIM-208ENST00000497849 SNCAIPQ9Y6H5 919 aa21.06■□□□□ 0.96
VIM-208ENST00000497849 ECM2O94769 699 aaPredicted RBP21.05■□□□□ 0.96
VIM-208ENST00000497849 CETPP11597 493 aa21.05■□□□□ 0.96
VIM-208ENST00000497849 MFSD14BQ5SR56 506 aa21.05■□□□□ 0.96
VIM-208ENST00000497849 WDHD1O75717 1129 aaPredicted RBP21.04■□□□□ 0.96
VIM-208ENST00000497849 FOXO4P98177 505 aa21.04■□□□□ 0.96
VIM-208ENST00000497849 C17orf99Q6UX52 265 aa21.04■□□□□ 0.96
VIM-208ENST00000497849 TDRD7Q8NHU6 1098 aaKnown RBP21.04■□□□□ 0.96
VIM-208ENST00000497849 IRF6O14896 467 aa21.03■□□□□ 0.96
VIM-208ENST00000497849 SLC4A2P04920 1241 aa21.03■□□□□ 0.96
VIM-208ENST00000497849 GJA8P48165 433 aa21.03■□□□□ 0.96
VIM-208ENST00000497849 IFIT5Q13325 482 aaKnown RBP21.03■□□□□ 0.96
VIM-208ENST00000497849 ERO1BQ86YB8 467 aa21.03■□□□□ 0.96
VIM-208ENST00000497849 MYH16Q9H6N6 1097 aa21.03■□□□□ 0.96
VIM-208ENST00000497849 SRRDQ9UH36 339 aa21.03■□□□□ 0.96
VIM-208ENST00000497849 CRKP46108 304 aa21.02■□□□□ 0.96
VIM-208ENST00000497849 TNNI2P48788 182 aa21.02■□□□□ 0.96
VIM-208ENST00000497849 LINS1Q8NG48 757 aa21.02■□□□□ 0.96
VIM-208ENST00000497849 NKX2-3Q8TAU0 364 aa21.02■□□□□ 0.96
VIM-208ENST00000497849 TSR2Q969E8 191 aaKnown RBP21.02■□□□□ 0.96
VIM-208ENST00000497849 ZKSCAN4Q969J2 545 aaPredicted RBP21.02■□□□□ 0.96
VIM-208ENST00000497849 TRIM47Q96LD4 638 aa21.02■□□□□ 0.96
VIM-208ENST00000497849 PLIN1O60240 522 aa21.01■□□□□ 0.95
VIM-208ENST00000497849 GJB1P08034 283 aa21.01■□□□□ 0.95
VIM-208ENST00000497849 OSBPP22059 807 aa21.01■□□□□ 0.95
VIM-208ENST00000497849 PSMC4P43686 418 aa21.01■□□□□ 0.95
VIM-208ENST00000497849 SNAPC2Q13487 334 aa21.01■□□□□ 0.95
VIM-208ENST00000497849 DNAAF4Q8WXU2 420 aa21.01■□□□□ 0.95
VIM-208ENST00000497849 ZNF594Q96JF6 807 aaPredicted RBP21.01■□□□□ 0.95
VIM-208ENST00000497849 HTATIP2Q9BUP3 242 aa21.01■□□□□ 0.95
VIM-208ENST00000497849 CPA4Q9UI42 421 aa21.01■□□□□ 0.95
VIM-208ENST00000497849 SOX1O00570 391 aaPredicted RBP21■□□□□ 0.95
VIM-208ENST00000497849 ZBTB7BO15156 539 aaPredicted RBP21■□□□□ 0.95
VIM-208ENST00000497849 CCL5P13501 91 aa21■□□□□ 0.95
VIM-208ENST00000497849 GRK4P32298 578 aa21■□□□□ 0.95
VIM-208ENST00000497849 GYG1P46976 350 aa21■□□□□ 0.95
VIM-208ENST00000497849 FLIIQ13045 1269 aa21■□□□□ 0.95
VIM-208ENST00000497849 PPIL2Q13356 520 aa21■□□□□ 0.95
VIM-208ENST00000497849 GRIK5Q16478 980 aa21■□□□□ 0.95
VIM-208ENST00000497849 WRNIP1Q96S55 665 aa21■□□□□ 0.95
VIM-208ENST00000497849 CHMP3Q9Y3E7 222 aa21■□□□□ 0.95
VIM-208ENST00000497849 RIPOR2Q9Y4F9 1068 aa21■□□□□ 0.95
VIM-208ENST00000497849 CACNB3P54284 484 aa20.99■□□□□ 0.95
VIM-208ENST00000497849 ADGRA2Q96PE1 1338 aa20.99■□□□□ 0.95
VIM-208ENST00000497849 TWISTNBQ3B726 338 aaPredicted RBP20.98■□□□□ 0.95
VIM-208ENST00000497849 EPHA10Q5JZY3 1008 aa20.98■□□□□ 0.95
VIM-208ENST00000497849 LDHAL6AQ6ZMR3 332 aa20.98■□□□□ 0.95
VIM-208ENST00000497849 RAET1EQ8TD07 263 aa20.98■□□□□ 0.95
VIM-208ENST00000497849 FAM84BQ96KN1 310 aaPredicted RBP20.98■□□□□ 0.95
VIM-208ENST00000497849 RNF208Q9H0X6 261 aa20.98■□□□□ 0.95
VIM-208ENST00000497849 NR2E3Q9Y5X4 410 aa20.98■□□□□ 0.95
VIM-208ENST00000497849 HIBADHP31937 336 aaKnown RBP20.97■□□□□ 0.95
VIM-208ENST00000497849 FKBP5Q13451 457 aaPredicted RBP20.97■□□□□ 0.95
VIM-208ENST00000497849 LMBR1LQ6UX01 489 aa20.97■□□□□ 0.95
VIM-208ENST00000497849 LRCH3Q96II8 777 aa20.97■□□□□ 0.95
VIM-208ENST00000497849 MYPNQ86TC9 1320 aa20.97■□□□□ 0.95
VIM-208ENST00000497849 MGAMO43451 1857 aa20.96■□□□□ 0.95
VIM-208ENST00000497849 CACNA1FO60840 1977 aa20.96■□□□□ 0.95
VIM-208ENST00000497849 A0A1W2PPC1 479 aa20.96■□□□□ 0.95
VIM-208ENST00000497849 FMNL1O95466 1100 aaPredicted RBP20.96■□□□□ 0.95
VIM-208ENST00000497849 HOXD10P28358 340 aa20.96■□□□□ 0.95
VIM-208ENST00000497849 UBE4AQ14139 1066 aa20.96■□□□□ 0.95
VIM-208ENST00000497849 ANKRD23Q86SG2 305 aa20.96■□□□□ 0.95
VIM-208ENST00000497849 U2AF1L4Q8WU68 220 aaKnown RBP20.96■□□□□ 0.95
VIM-208ENST00000497849 CNNM1Q9NRU3 951 aa20.96■□□□□ 0.95
VIM-208ENST00000497849 FARP2O94887 1054 aaPredicted RBP20.95■□□□□ 0.94
VIM-208ENST00000497849 PPATQ06203 517 aa20.95■□□□□ 0.94
VIM-208ENST00000497849 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.95■□□□□ 0.94
VIM-208ENST00000497849 PDHXO00330 501 aa20.94■□□□□ 0.94
VIM-208ENST00000497849 HDLBPQ00341 1268 aaKnown RBP20.94■□□□□ 0.94
VIM-208ENST00000497849 PRKCZQ05513 592 aa20.94■□□□□ 0.94
VIM-208ENST00000497849 CCDC57Q2TAC2 916 aa20.94■□□□□ 0.94
VIM-208ENST00000497849 FAM83AQ86UY5 434 aa20.94■□□□□ 0.94
VIM-208ENST00000497849 INPP5BP32019 993 aa20.93■□□□□ 0.94
VIM-208ENST00000497849 UBXN2AP68543 259 aa20.93■□□□□ 0.94
VIM-208ENST00000497849 DDX10Q13206 875 aaKnown RBP20.93■□□□□ 0.94
VIM-208ENST00000497849 MOGSQ13724 837 aa20.93■□□□□ 0.94
VIM-208ENST00000497849 TAF7LQ5H9L4 462 aa20.93■□□□□ 0.94
VIM-208ENST00000497849 UNC93B1Q9H1C4 597 aa20.93■□□□□ 0.94
VIM-208ENST00000497849 BIN2Q9UBW5 565 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms