RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 ELP3Q9H9T3 547 aa27.53■■■□□ 2
CLIC4-204ENST00000497755 SLC4A10Q6U841 1118 aa27.52■■■□□ 2
CLIC4-204ENST00000497755 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.52■■■□□ 2
CLIC4-204ENST00000497755 SUCLG2Q96I99 432 aa27.52■■■□□ 2
CLIC4-204ENST00000497755 RIPOR2Q9Y4F9 1068 aa27.52■■■□□ 2
CLIC4-204ENST00000497755 SP3Q02447 781 aa27.51■■□□□ 1.99
CLIC4-204ENST00000497755 SRCIN1Q9C0H9 1055 aa27.51■■□□□ 1.99
CLIC4-204ENST00000497755 EFCC1Q9HA90 598 aa27.51■■□□□ 1.99
CLIC4-204ENST00000497755 TCP10L2B9ZVM9 353 aa27.5■■□□□ 1.99
CLIC4-204ENST00000497755 CRKP46108 304 aa27.5■■□□□ 1.99
CLIC4-204ENST00000497755 GRIK5Q16478 980 aa27.5■■□□□ 1.99
CLIC4-204ENST00000497755 CNKSR2Q8WXI2 1034 aa27.5■■□□□ 1.99
CLIC4-204ENST00000497755 TMEM39BQ9GZU3 492 aa27.5■■□□□ 1.99
CLIC4-204ENST00000497755 OTOFQ9HC10 1997 aa27.49■■□□□ 1.99
CLIC4-204ENST00000497755 NBPF7P0C2Y1 421 aaPredicted RBP27.49■■□□□ 1.99
CLIC4-204ENST00000497755 FBXO33Q7Z6M2 555 aa27.49■■□□□ 1.99
CLIC4-204ENST00000497755 MAP3K9P80192 1104 aa27.48■■□□□ 1.99
CLIC4-204ENST00000497755 BRI3BPQ8WY22 251 aa27.48■■□□□ 1.99
CLIC4-204ENST00000497755 ARMC5Q96C12 935 aa27.48■■□□□ 1.99
CLIC4-204ENST00000497755 MROH5Q6ZUA9 1318 aa27.47■■□□□ 1.99
CLIC4-204ENST00000497755 VGLL4Q14135 290 aa27.47■■□□□ 1.99
CLIC4-204ENST00000497755 UTYO14607 1347 aa27.46■■□□□ 1.99
CLIC4-204ENST00000497755 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.46■■□□□ 1.99
CLIC4-204ENST00000497755 IQSEC3Q9UPP2 1182 aaPredicted RBP27.46■■□□□ 1.99
CLIC4-204ENST00000497755 TNNI2P48788 182 aa27.45■■□□□ 1.98
CLIC4-204ENST00000497755 GTF2A2P52657 109 aa27.44■■□□□ 1.98
CLIC4-204ENST00000497755 HDLBPQ00341 1268 aaKnown RBP27.44■■□□□ 1.98
CLIC4-204ENST00000497755 RABL6Q3YEC7 729 aaPredicted RBP27.44■■□□□ 1.98
CLIC4-204ENST00000497755 LRRC24Q50LG9 513 aa27.44■■□□□ 1.98
CLIC4-204ENST00000497755 VPS37DQ86XT2 251 aa27.44■■□□□ 1.98
CLIC4-204ENST00000497755 BICC1Q9H694 974 aaKnown RBP27.44■■□□□ 1.98
CLIC4-204ENST00000497755 CCL15-CCL14A0A0B4J2E2 113 aa27.43■■□□□ 1.98
CLIC4-204ENST00000497755 EN2P19622 333 aaPredicted RBP27.43■■□□□ 1.98
CLIC4-204ENST00000497755 CHAF1AQ13111 956 aaPredicted RBP27.43■■□□□ 1.98
CLIC4-204ENST00000497755 CCL15Q16663 113 aa27.43■■□□□ 1.98
CLIC4-204ENST00000497755 GCC1Q96CN9 775 aa27.43■■□□□ 1.98
CLIC4-204ENST00000497755 ARAP2Q8WZ64 1704 aa27.42■■□□□ 1.98
CLIC4-204ENST00000497755 TAF1CQ15572 869 aaPredicted RBP27.42■■□□□ 1.98
CLIC4-204ENST00000497755 FAM43AQ8N2R8 423 aa27.42■■□□□ 1.98
CLIC4-204ENST00000497755 ZFYVE28Q9HCC9 887 aa27.42■■□□□ 1.98
CLIC4-204ENST00000497755 CSADQ9Y600 493 aa27.42■■□□□ 1.98
CLIC4-204ENST00000497755 RBBP6Q7Z6E9 1792 aaKnown RBP27.42■■□□□ 1.98
CLIC4-204ENST00000497755 CACNB3P54284 484 aa27.41■■□□□ 1.98
CLIC4-204ENST00000497755 CAVIN4Q5BKX8 364 aa27.41■■□□□ 1.98
CLIC4-204ENST00000497755 ANKRD44Q8N8A2 993 aa27.41■■□□□ 1.98
CLIC4-204ENST00000497755 VGLL2Q8N8G2 317 aa27.41■■□□□ 1.98
CLIC4-204ENST00000497755 TBC1D22AQ8WUA7 517 aa27.41■■□□□ 1.98
CLIC4-204ENST00000497755 OTUD5Q96G74 571 aa27.41■■□□□ 1.98
CLIC4-204ENST00000497755 ANP32CO43423 234 aa27.4■■□□□ 1.98
CLIC4-204ENST00000497755 PDE8BO95263 885 aa27.4■■□□□ 1.98
CLIC4-204ENST00000497755 METTL24Q5JXM2 366 aa27.4■■□□□ 1.98
CLIC4-204ENST00000497755 TEKT1Q969V4 418 aa27.4■■□□□ 1.98
CLIC4-204ENST00000497755 MRIQ9BWK5 157 aa27.4■■□□□ 1.98
CLIC4-204ENST00000497755 FRAT2O75474 233 aaPredicted RBP27.39■■□□□ 1.98
CLIC4-204ENST00000497755 BCAMP50895 628 aa27.39■■□□□ 1.98
CLIC4-204ENST00000497755 ZNF333Q96JL9 665 aa27.39■■□□□ 1.98
CLIC4-204ENST00000497755 ZDHHC15Q96MV8 337 aa27.39■■□□□ 1.98
CLIC4-204ENST00000497755 SPDYE5A6NIY4 337 aa27.38■■□□□ 1.97
CLIC4-204ENST00000497755 ARHGEF6Q15052 776 aa27.38■■□□□ 1.97
CLIC4-204ENST00000497755 SNCAIPQ9Y6H5 919 aa27.38■■□□□ 1.97
CLIC4-204ENST00000497755 HABP4Q5JVS0 413 aaKnown RBP27.37■■□□□ 1.97
CLIC4-204ENST00000497755 APOBEC3HQ6NTF7 200 aaKnown RBP27.37■■□□□ 1.97
CLIC4-204ENST00000497755 KLHDC4Q8TBB5 520 aa27.37■■□□□ 1.97
CLIC4-204ENST00000497755 PTCH2Q9Y6C5 1203 aa27.37■■□□□ 1.97
CLIC4-204ENST00000497755 FAM83AQ86UY5 434 aa27.36■■□□□ 1.97
CLIC4-204ENST00000497755 ERO1BQ86YB8 467 aa27.36■■□□□ 1.97
CLIC4-204ENST00000497755 MRPL50Q8N5N7 158 aaKnown RBP27.36■■□□□ 1.97
CLIC4-204ENST00000497755 ZKSCAN4Q969J2 545 aaPredicted RBP27.36■■□□□ 1.97
CLIC4-204ENST00000497755 TMEM106CQ9BVX2 250 aa27.36■■□□□ 1.97
CLIC4-204ENST00000497755 CETPP11597 493 aa27.35■■□□□ 1.97
CLIC4-204ENST00000497755 FKBP1CQ5VVH2 108 aa27.35■■□□□ 1.97
CLIC4-204ENST00000497755 NBPF11Q86T75 865 aa27.35■■□□□ 1.97
CLIC4-204ENST00000497755 FAM9BQ8IZU0 186 aa27.35■■□□□ 1.97
CLIC4-204ENST00000497755 WRNIP1Q96S55 665 aa27.35■■□□□ 1.97
CLIC4-204ENST00000497755 BTBD19C9JJ37 291 aa27.34■■□□□ 1.97
CLIC4-204ENST00000497755 TLR2O60603 784 aa27.34■■□□□ 1.97
CLIC4-204ENST00000497755 SLC9C1Q4G0N8 1177 aa27.34■■□□□ 1.97
CLIC4-204ENST00000497755 SUGT1Q9Y2Z0 365 aa27.34■■□□□ 1.97
CLIC4-204ENST00000497755 IRF6O14896 467 aa27.33■■□□□ 1.97
CLIC4-204ENST00000497755 FGFR2P21802 821 aa27.33■■□□□ 1.97
CLIC4-204ENST00000497755 HHIPL2Q6UWX4 724 aa27.33■■□□□ 1.97
CLIC4-204ENST00000497755 USP44Q9H0E7 712 aa27.33■■□□□ 1.97
CLIC4-204ENST00000497755 TMOD2Q9NZR1 351 aa27.33■■□□□ 1.97
CLIC4-204ENST00000497755 ARHGAP39Q9C0H5 1083 aa27.32■■□□□ 1.96
CLIC4-204ENST00000497755 ZCCHC17Q9NP64 241 aaKnown RBP27.32■■□□□ 1.96
CLIC4-204ENST00000497755 ZNF521Q96K83 1311 aa27.32■■□□□ 1.96
CLIC4-204ENST00000497755 WDHD1O75717 1129 aaPredicted RBP27.31■■□□□ 1.96
CLIC4-204ENST00000497755 SNAPC2Q13487 334 aa27.31■■□□□ 1.96
CLIC4-204ENST00000497755 HOOK2Q96ED9 719 aa27.31■■□□□ 1.96
CLIC4-204ENST00000497755 KIF16BQ96L93 1317 aa27.31■■□□□ 1.96
CLIC4-204ENST00000497755 CEP290O15078 2479 aa27.3■■□□□ 1.96
CLIC4-204ENST00000497755 LACTBP83111 547 aaPredicted RBP27.3■■□□□ 1.96
CLIC4-204ENST00000497755 PPIL2Q13356 520 aa27.3■■□□□ 1.96
CLIC4-204ENST00000497755 PUM3Q15397 648 aaKnown RBP27.3■■□□□ 1.96
CLIC4-204ENST00000497755 MIGA2Q7L4E1 593 aa27.3■■□□□ 1.96
CLIC4-204ENST00000497755 MAST3O60307 1309 aa27.3■■□□□ 1.96
CLIC4-204ENST00000497755 IFIT1P09914 478 aaKnown RBP27.29■■□□□ 1.96
CLIC4-204ENST00000497755 SLC4A8Q2Y0W8 1093 aa27.29■■□□□ 1.96
CLIC4-204ENST00000497755 PTPRCP08575 1304 aa27.29■■□□□ 1.96
CLIC4-204ENST00000497755 RFX5P48382 616 aaPredicted RBP27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms