RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 CHRM1P11229 460 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 PIP4K2AP48426 406 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 RIC3Q7Z5B4 369 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 BRMS1Q9HCU9 246 aa12.14□□□□□ -0.47
TRAPPC12-223ENST00000497597 SIGLEC1Q9BZZ2 1709 aa12.13□□□□□ -0.47
TRAPPC12-223ENST00000497597 A0A0G2JLW4 131 aa12.13□□□□□ -0.47
TRAPPC12-223ENST00000497597 ADALQ6DHV7 355 aa12.13□□□□□ -0.47
TRAPPC12-223ENST00000497597 BCAS4Q8TDM0 211 aa12.13□□□□□ -0.47
TRAPPC12-223ENST00000497597 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC12-223ENST00000497597 TAF5LO75529 589 aa12.13□□□□□ -0.47
TRAPPC12-223ENST00000497597 INPP5BP32019 993 aa12.13□□□□□ -0.47
TRAPPC12-223ENST00000497597 MAP3K9P80192 1104 aa12.13□□□□□ -0.47
TRAPPC12-223ENST00000497597 ACRBPQ8NEB7 543 aa12.13□□□□□ -0.47
TRAPPC12-223ENST00000497597 AIFM3Q96NN9 605 aa12.13□□□□□ -0.47
TRAPPC12-223ENST00000497597 GBP3Q9H0R5 595 aa12.13□□□□□ -0.47
TRAPPC12-223ENST00000497597 SLC24A3Q9HC58 644 aa12.13□□□□□ -0.47
TRAPPC12-223ENST00000497597 SNRKQ9NRH2 765 aa12.13□□□□□ -0.47
TRAPPC12-223ENST00000497597 MKRN1Q9UHC7 482 aaKnown RBP12.13□□□□□ -0.47
TRAPPC12-223ENST00000497597 KLF18A0A0U1RQI7 1052 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 GOLGA6L9A6NEM1 432 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 TUBB4AP04350 444 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 PSME1Q06323 249 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 GRAMD1CQ8IYS0 662 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 CEP112Q8N8E3 955 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 ENGASEQ8NFI3 743 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 EYA1Q99502 592 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 FANCAO15360 1455 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 FOXN1O15353 648 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 CCT6AP40227 531 aaKnown RBP12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 KCNG4Q8TDN1 519 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 HMG20BQ9P0W2 317 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 PLEKHG2Q9H7P9 1386 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 KIDINS220Q9ULH0 1771 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 CLGNO14967 610 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 CUTAO60888 179 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 USP8P40818 1118 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 AFMP43652 599 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 NLRP6P59044 892 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 RALYLQ86SE5 291 aaKnown RBP12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 CCDC148Q8NFR7 591 aa12.12□□□□□ -0.47
TRAPPC12-223ENST00000497597 ATP1A2P50993 1020 aa12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 CORO7P57737 925 aa12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 DHX32Q7L7V1 743 aaKnown RBP12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 VSTM4Q8IW00 320 aa12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 NOA1Q8NC60 698 aaKnown RBP12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 SLF1Q9BQI6 1058 aa12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 PCDHA5Q9Y5H7 936 aa12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 U3KPZ7 1027 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 NPATQ14207 1427 aa12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 CCDC102BQ68D86 513 aa12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 MPRIPQ6WCQ1 1025 aa12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 NFXL1Q6ZNB6 911 aa12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 LINC00301Q8NCQ3 95 aa12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 PSMB7Q99436 277 aa12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 YY1AP1Q9H869 796 aa12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 SAMSN1Q9NSI8 373 aaKnown RBP12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 CDC23Q9UJX2 597 aa12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 SUFUQ9UMX1 484 aa12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 PPFIA4O75335 1185 aa12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 CCDC172P0C7W6 258 aa12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 FKBP4Q02790 459 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 BEND6Q5SZJ8 279 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 ANO1Q5XXA6 986 aa12.11□□□□□ -0.47
TRAPPC12-223ENST00000497597 HECW2Q9P2P5 1572 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 A0A087WUV0 522 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 TRDNQ13061 729 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 MYSM1Q5VVJ2 828 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 SPECC1LQ69YQ0 1117 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 NAA16Q6N069 864 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 TICAM2Q86XR7 235 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 EFCAB13Q8IY85 973 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 OTUD6BQ8N6M0 293 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 IGSF22Q8N9C0 903 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 FAM76AQ8TAV0 307 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 STAMQ92783 540 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 PCMTD1Q96MG8 357 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 NUP88Q99567 741 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 CEP83Q9Y592 693 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 FAM169AQ9Y6X4 670 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 GOLGA6CA6NDK9 693 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 LRRIQ3A6PVS8 624 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 GOLGA6DP0CG33 693 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 ADD1P35611 737 aaKnown RBP12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 FAM69CQ0P6D2 419 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 TRIM29Q14134 588 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 IL17REQ8NFR9 667 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 FAM71BQ8TC56 605 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 GOLGA6AQ9NYA3 693 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 ABCC3O15438 1527 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 POGZQ7Z3K3 1410 aa12.1□□□□□ -0.47
TRAPPC12-223ENST00000497597 AKR1B15C9JRZ8 316 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 NDUFAB1O14561 156 aa12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 SRGAP2O75044 1071 aa12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 GNGT1P63211 74 aa12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 STIM1Q13586 685 aa12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 POLA2Q14181 598 aa12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 NCAPHQ15003 741 aa12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 KIRREL3Q8IZU9 778 aa12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 SUCLG2Q96I99 432 aa12.09□□□□□ -0.47
TRAPPC12-223ENST00000497597 ZNF330Q9Y3S2 320 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms