RNA–Protein interactions for RNA: ENST00000497382.5

VIT-208, Transcript of vitrin, human

TSL 1 (best) BASIC

Gene VIT, Length 2,650 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VIT-208	ENST00000497382	PYGL	P06737	847 aa		11.08	□□□□□ -0.64
VIT-208	ENST00000497382	CDR1	P51861	262 aa		11.08	□□□□□ -0.64
VIT-208	ENST00000497382	ZC3H6	P61129	1189 aa	Known RBP	11.08	□□□□□ -0.64
VIT-208	ENST00000497382	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.08	□□□□□ -0.64
VIT-208	ENST00000497382	ALKBH2	Q6NS38	261 aa		11.08	□□□□□ -0.64
VIT-208	ENST00000497382	NACC2	Q96BF6	587 aa		11.08	□□□□□ -0.64
VIT-208	ENST00000497382	TMEM165	Q9HC07	324 aa		11.08	□□□□□ -0.64
VIT-208	ENST00000497382	NUCB2	P80303	420 aa		11.07	□□□□□ -0.64
VIT-208	ENST00000497382	DDB1	Q16531	1140 aa		11.07	□□□□□ -0.64
VIT-208	ENST00000497382	TEX35	Q5T0J7	233 aa		11.07	□□□□□ -0.64
VIT-208	ENST00000497382	DDX27	Q96GQ7	796 aa	Known RBP	11.07	□□□□□ -0.64
VIT-208	ENST00000497382	RBSN	Q9H1K0	784 aa		11.07	□□□□□ -0.64
VIT-208	ENST00000497382	EXOC1	Q9NV70	894 aa		11.07	□□□□□ -0.64
VIT-208	ENST00000497382	MAFF	Q9ULX9	164 aa		11.07	□□□□□ -0.64
VIT-208	ENST00000497382	IKBKG	Q9Y6K9	419 aa		11.07	□□□□□ -0.64
VIT-208	ENST00000497382	GLI3	P10071	1580 aa		11.07	□□□□□ -0.64
VIT-208	ENST00000497382	TMEM110-MUSTN1	A8MSY1	372 aa		11.07	□□□□□ -0.64
VIT-208	ENST00000497382	PYGB	P11216	843 aa		11.07	□□□□□ -0.64
VIT-208	ENST00000497382	TRIM29	Q14134	588 aa		11.07	□□□□□ -0.64
VIT-208	ENST00000497382	NBPF8	Q3BBV2	869 aa		11.07	□□□□□ -0.64
VIT-208	ENST00000497382	ARMC9	Q7Z3E5	817 aa		11.07	□□□□□ -0.64
VIT-208	ENST00000497382	SMARCC1	Q92922	1105 aa	Predicted RBP	11.07	□□□□□ -0.64
VIT-208	ENST00000497382	RBM17	Q96I25	401 aa	Known RBP	11.07	□□□□□ -0.64
VIT-208	ENST00000497382	LNPK	Q9C0E8	428 aa		11.07	□□□□□ -0.64
VIT-208	ENST00000497382	SPC25	Q9HBM1	224 aa		11.07	□□□□□ -0.64
VIT-208	ENST00000497382	CLIP2	Q9UDT6	1046 aa		11.07	□□□□□ -0.64
VIT-208	ENST00000497382	MSL3P1	P0C860	447 aa		11.06	□□□□□ -0.64
VIT-208	ENST00000497382	SPATA21	Q7Z572	469 aa		11.06	□□□□□ -0.64
VIT-208	ENST00000497382	PARP9	Q8IXQ6	854 aa		11.06	□□□□□ -0.64
VIT-208	ENST00000497382	ATRIP	Q8WXE1	791 aa		11.06	□□□□□ -0.64
VIT-208	ENST00000497382	DHX38	Q92620	1227 aa	Known RBP	11.06	□□□□□ -0.64
VIT-208	ENST00000497382	SLC39A3	Q9BRY0	314 aa		11.06	□□□□□ -0.64
VIT-208	ENST00000497382	A1CF	Q9NQ94	594 aa	Known RBP	11.06	□□□□□ -0.64
VIT-208	ENST00000497382	BRWD3	Q6RI45	1802 aa		11.06	□□□□□ -0.64
VIT-208	ENST00000497382	CCDC159	P0C7I6	412 aa		11.06	□□□□□ -0.64
VIT-208	ENST00000497382	ELF1	P32519	619 aa		11.06	□□□□□ -0.64
VIT-208	ENST00000497382	CCNH	P51946	323 aa	Predicted RBP	11.06	□□□□□ -0.64
VIT-208	ENST00000497382	CCDC93	Q567U6	631 aa		11.06	□□□□□ -0.64
VIT-208	ENST00000497382	SCLT1	Q96NL6	688 aa		11.06	□□□□□ -0.64
VIT-208	ENST00000497382	UBAP1	Q9NZ09	502 aa		11.06	□□□□□ -0.64
VIT-208	ENST00000497382	SLIT2	O94813	1529 aa		11.05	□□□□□ -0.64
VIT-208	ENST00000497382	RALGAPB	Q86X10	1494 aa		11.05	□□□□□ -0.64
VIT-208	ENST00000497382	POSTN	Q15063	836 aa		11.05	□□□□□ -0.64
VIT-208	ENST00000497382	KIF4B	Q2VIQ3	1234 aa		11.05	□□□□□ -0.64
VIT-208	ENST00000497382	ANKRD45	Q5TZF3	282 aa		11.05	□□□□□ -0.64
VIT-208	ENST00000497382	MSL1	Q68DK7	614 aa		11.05	□□□□□ -0.64
VIT-208	ENST00000497382	ERP27	Q96DN0	273 aa		11.05	□□□□□ -0.64
VIT-208	ENST00000497382	ZNF652	Q9Y2D9	606 aa		11.05	□□□□□ -0.64
VIT-208	ENST00000497382	ERLIN1	O75477	346 aa		11.05	□□□□□ -0.64
VIT-208	ENST00000497382	RBP3	P10745	1247 aa		11.05	□□□□□ -0.64
VIT-208	ENST00000497382	ZNF16	P17020	682 aa	Predicted RBP	11.05	□□□□□ -0.64
VIT-208	ENST00000497382	RNF20	Q5VTR2	975 aa		11.05	□□□□□ -0.64
VIT-208	ENST00000497382	KRT77	Q7Z794	578 aa		11.05	□□□□□ -0.64
VIT-208	ENST00000497382	MIGA1	Q8NAN2	632 aa		11.05	□□□□□ -0.64
VIT-208	ENST00000497382	KCNN1	Q92952	543 aa		11.05	□□□□□ -0.64
VIT-208	ENST00000497382	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.05	□□□□□ -0.64
VIT-208	ENST00000497382	TFIP11	Q9UBB9	837 aa	Known RBP	11.05	□□□□□ -0.64
VIT-208	ENST00000497382	COG6	Q9Y2V7	657 aa		11.05	□□□□□ -0.64
VIT-208	ENST00000497382	NPHP3	Q7Z494	1330 aa		11.04	□□□□□ -0.64
VIT-208	ENST00000497382	EIF2B5	Q13144	721 aa	Known RBP	11.04	□□□□□ -0.64
VIT-208	ENST00000497382	IQCB1	Q15051	598 aa		11.04	□□□□□ -0.64
VIT-208	ENST00000497382	PLEKHG6	Q3KR16	790 aa		11.04	□□□□□ -0.64
VIT-208	ENST00000497382	FAM117B	Q6P1L5	589 aa		11.04	□□□□□ -0.64
VIT-208	ENST00000497382	PACS1	Q6VY07	963 aa		11.04	□□□□□ -0.64
VIT-208	ENST00000497382	ANKRD18A	Q8IVF6	992 aa		11.04	□□□□□ -0.64
VIT-208	ENST00000497382	RSRC1	Q96IZ7	334 aa	Known RBP	11.04	□□□□□ -0.64
VIT-208	ENST00000497382	AK7	Q96M32	723 aa		11.04	□□□□□ -0.64
VIT-208	ENST00000497382	MPHOSPH6	Q99547	160 aa	Known RBP	11.04	□□□□□ -0.64
VIT-208	ENST00000497382	SEL1L	Q9UBV2	794 aa		11.04	□□□□□ -0.64
VIT-208	ENST00000497382	TMA7	Q9Y2S6	64 aa	Known RBP	11.04	□□□□□ -0.64
VIT-208	ENST00000497382	NWD2	Q9ULI1	1742 aa		11.04	□□□□□ -0.64
VIT-208	ENST00000497382	LRPPRC	P42704	1394 aa	Known RBP	11.04	□□□□□ -0.64
VIT-208	ENST00000497382	MNAT1	P51948	309 aa		11.04	□□□□□ -0.64
VIT-208	ENST00000497382	GPS2	Q13227	327 aa		11.04	□□□□□ -0.64
VIT-208	ENST00000497382	NEDD9	Q14511	834 aa		11.04	□□□□□ -0.64
VIT-208	ENST00000497382	C3orf20	Q8ND61	904 aa		11.04	□□□□□ -0.64
VIT-208	ENST00000497382	MPHOSPH9	Q99550	1183 aa		11.04	□□□□□ -0.64
VIT-208	ENST00000497382	EPAS1	Q99814	870 aa		11.04	□□□□□ -0.64
VIT-208	ENST00000497382	CDC42BPG	Q6DT37	1551 aa		11.04	□□□□□ -0.64
VIT-208	ENST00000497382	NKX1-1	Q15270	411 aa	Predicted RBP	11.03	□□□□□ -0.64
VIT-208	ENST00000497382	TOMM20	Q15388	145 aa		11.03	□□□□□ -0.64
VIT-208	ENST00000497382	UNC5CL	Q8IV45	518 aa		11.03	□□□□□ -0.64
VIT-208	ENST00000497382	FAM114A1	Q8IWE2	563 aa		11.03	□□□□□ -0.64
VIT-208	ENST00000497382	PIBF1	Q8WXW3	757 aa		11.03	□□□□□ -0.64
VIT-208	ENST00000497382	GOLGA1	Q92805	767 aa		11.03	□□□□□ -0.64
VIT-208	ENST00000497382	TCEAL9	Q9UHQ7	104 aa		11.03	□□□□□ -0.64
VIT-208	ENST00000497382	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	11.03	□□□□□ -0.64
VIT-208	ENST00000497382	RGPD1	P0DJD0	1748 aa		11.03	□□□□□ -0.64
VIT-208	ENST00000497382	PXDN	Q92626	1479 aa		11.03	□□□□□ -0.64
VIT-208	ENST00000497382	MET	P08581	1390 aa		11.03	□□□□□ -0.64
VIT-208	ENST00000497382		H7C1W4	665 aa		11.03	□□□□□ -0.64
VIT-208	ENST00000497382	BAG6	P46379	1132 aa		11.03	□□□□□ -0.64
VIT-208	ENST00000497382	PARP10	Q53GL7	1025 aa		11.03	□□□□□ -0.64
VIT-208	ENST00000497382	MIPOL1	Q8TD10	442 aa		11.03	□□□□□ -0.64
VIT-208	ENST00000497382	TCP11	Q8WWU5	503 aa		11.03	□□□□□ -0.64
VIT-208	ENST00000497382	DDX17	Q92841	729 aa	Known RBP	11.03	□□□□□ -0.64
VIT-208	ENST00000497382	KIF1BP	Q96EK5	621 aa		11.03	□□□□□ -0.64
VIT-208	ENST00000497382	ANKIB1	Q9P2G1	1089 aa		11.03	□□□□□ -0.64
VIT-208	ENST00000497382	HDAC9	Q9UKV0	1011 aa		11.03	□□□□□ -0.64
VIT-208	ENST00000497382	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.02	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms