RNA–Protein interactions for RNA: ENST00000497216.2

SPTAN1-209, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 351 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-209ENST00000497216 TDRD3Q9H7E2 651 aaKnown RBP17.05■□□□□ 0.32
SPTAN1-209ENST00000497216 TRIM17Q9Y577 477 aa17.05■□□□□ 0.32
SPTAN1-209ENST00000497216 CRKP46108 304 aa17.04■□□□□ 0.32
SPTAN1-209ENST00000497216 CRHR2Q13324 411 aa17.04■□□□□ 0.32
SPTAN1-209ENST00000497216 INTS3Q68E01 1043 aaKnown RBP17.04■□□□□ 0.32
SPTAN1-209ENST00000497216 PTPN18Q99952 460 aa17.04■□□□□ 0.32
SPTAN1-209ENST00000497216 BICC1Q9H694 974 aaKnown RBP17.04■□□□□ 0.32
SPTAN1-209ENST00000497216 TNNI2P48788 182 aa17.03■□□□□ 0.32
SPTAN1-209ENST00000497216 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.03■□□□□ 0.32
SPTAN1-209ENST00000497216 ANKRD44Q8N8A2 993 aa17.03■□□□□ 0.32
SPTAN1-209ENST00000497216 VGLL2Q8N8G2 317 aa17.03■□□□□ 0.32
SPTAN1-209ENST00000497216 TBC1D22AQ8WUA7 517 aa17.03■□□□□ 0.32
SPTAN1-209ENST00000497216 OPTNQ96CV9 577 aa17.03■□□□□ 0.32
SPTAN1-209ENST00000497216 MS4A4AQ96JQ5 239 aa17.03■□□□□ 0.32
SPTAN1-209ENST00000497216 KIF16BQ96L93 1317 aa17.02■□□□□ 0.32
SPTAN1-209ENST00000497216 CDAN1Q8IWY9 1227 aa17.02■□□□□ 0.32
SPTAN1-209ENST00000497216 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.02■□□□□ 0.32
SPTAN1-209ENST00000497216 MRIQ9BWK5 157 aa17.02■□□□□ 0.32
SPTAN1-209ENST00000497216 ELP3Q9H9T3 547 aa17.02■□□□□ 0.32
SPTAN1-209ENST00000497216 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.02■□□□□ 0.32
SPTAN1-209ENST00000497216 PTPN22Q9Y2R2 807 aa17.02■□□□□ 0.32
SPTAN1-209ENST00000497216 PTPRCP08575 1304 aa17.01■□□□□ 0.31
SPTAN1-209ENST00000497216 PDE8BO95263 885 aa17.01■□□□□ 0.31
SPTAN1-209ENST00000497216 SP3Q02447 781 aa17.01■□□□□ 0.31
SPTAN1-209ENST00000497216 GRIK5Q16478 980 aa17.01■□□□□ 0.31
SPTAN1-209ENST00000497216 CAVIN4Q5BKX8 364 aa17.01■□□□□ 0.31
SPTAN1-209ENST00000497216 VPS37DQ86XT2 251 aa17.01■□□□□ 0.31
SPTAN1-209ENST00000497216 MRPL50Q8N5N7 158 aaKnown RBP17.01■□□□□ 0.31
SPTAN1-209ENST00000497216 CD99L2Q8TCZ2 262 aa17.01■□□□□ 0.31
SPTAN1-209ENST00000497216 TMEM39BQ9GZU3 492 aa17.01■□□□□ 0.31
SPTAN1-209ENST00000497216 ZNF316A6NFI3 1004 aaPredicted RBP17■□□□□ 0.31
SPTAN1-209ENST00000497216 TCP10L2B9ZVM9 353 aa17■□□□□ 0.31
SPTAN1-209ENST00000497216 MAP3K9P80192 1104 aa17■□□□□ 0.31
SPTAN1-209ENST00000497216 VGLL4Q14135 290 aa17■□□□□ 0.31
SPTAN1-209ENST00000497216 LRRC24Q50LG9 513 aa17■□□□□ 0.31
SPTAN1-209ENST00000497216 METTL24Q5JXM2 366 aa17■□□□□ 0.31
SPTAN1-209ENST00000497216 FKBP1CQ5VVH2 108 aa17■□□□□ 0.31
SPTAN1-209ENST00000497216 FAM9BQ8IZU0 186 aa17■□□□□ 0.31
SPTAN1-209ENST00000497216 ARMC5Q96C12 935 aa17■□□□□ 0.31
SPTAN1-209ENST00000497216 ZDHHC15Q96MV8 337 aa17■□□□□ 0.31
SPTAN1-209ENST00000497216 EFCC1Q9HA90 598 aa17■□□□□ 0.31
SPTAN1-209ENST00000497216 SUGT1Q9Y2Z0 365 aa17■□□□□ 0.31
SPTAN1-209ENST00000497216 RPAP1Q9BWH6 1393 aaPredicted RBP17■□□□□ 0.31
SPTAN1-209ENST00000497216 GTF2A2P52657 109 aa16.99■□□□□ 0.31
SPTAN1-209ENST00000497216 FAM83AQ86UY5 434 aa16.99■□□□□ 0.31
SPTAN1-209ENST00000497216 BRI3BPQ8WY22 251 aa16.99■□□□□ 0.31
SPTAN1-209ENST00000497216 TEKT1Q969V4 418 aa16.99■□□□□ 0.31
SPTAN1-209ENST00000497216 IQSEC3Q9UPP2 1182 aaPredicted RBP16.99■□□□□ 0.31
SPTAN1-209ENST00000497216 MAST3O60307 1309 aa16.98■□□□□ 0.31
SPTAN1-209ENST00000497216 AK9Q5TCS8 1911 aa16.98■□□□□ 0.31
SPTAN1-209ENST00000497216 SPDYE5A6NIY4 337 aa16.98■□□□□ 0.31
SPTAN1-209ENST00000497216 FGFR2P21802 821 aa16.98■□□□□ 0.31
SPTAN1-209ENST00000497216 ZEB1P37275 1124 aaPredicted RBP16.98■□□□□ 0.31
SPTAN1-209ENST00000497216 CHAF1AQ13111 956 aaPredicted RBP16.98■□□□□ 0.31
SPTAN1-209ENST00000497216 CNKSR2Q8WXI2 1034 aa16.98■□□□□ 0.31
SPTAN1-209ENST00000497216 CSADQ9Y600 493 aa16.98■□□□□ 0.31
SPTAN1-209ENST00000497216 ZSWIM8A7E2V4 1837 aa16.98■□□□□ 0.31
SPTAN1-209ENST00000497216 CCL15-CCL14A0A0B4J2E2 113 aa16.97■□□□□ 0.31
SPTAN1-209ENST00000497216 POTEFA5A3E0 1075 aa16.97■□□□□ 0.31
SPTAN1-209ENST00000497216 FRAT2O75474 233 aaPredicted RBP16.97■□□□□ 0.31
SPTAN1-209ENST00000497216 CAP1Q01518 475 aa16.97■□□□□ 0.31
SPTAN1-209ENST00000497216 PUM3Q15397 648 aaKnown RBP16.97■□□□□ 0.31
SPTAN1-209ENST00000497216 CCL15Q16663 113 aa16.97■□□□□ 0.31
SPTAN1-209ENST00000497216 HOOK2Q96ED9 719 aa16.97■□□□□ 0.31
SPTAN1-209ENST00000497216 USP44Q9H0E7 712 aa16.97■□□□□ 0.31
SPTAN1-209ENST00000497216 ZCCHC17Q9NP64 241 aaKnown RBP16.97■□□□□ 0.31
SPTAN1-209ENST00000497216 BCAMP50895 628 aa16.96■□□□□ 0.31
SPTAN1-209ENST00000497216 ARHGEF6Q15052 776 aa16.96■□□□□ 0.31
SPTAN1-209ENST00000497216 TAF1CQ15572 869 aaPredicted RBP16.96■□□□□ 0.31
SPTAN1-209ENST00000497216 APOBEC3HQ6NTF7 200 aaKnown RBP16.96■□□□□ 0.31
SPTAN1-209ENST00000497216 HHIPL2Q6UWX4 724 aa16.96■□□□□ 0.31
SPTAN1-209ENST00000497216 ZFYVE28Q9HCC9 887 aa16.96■□□□□ 0.31
SPTAN1-209ENST00000497216 TMOD2Q9NZR1 351 aa16.96■□□□□ 0.31
SPTAN1-209ENST00000497216 SNCAIPQ9Y6H5 919 aa16.96■□□□□ 0.31
SPTAN1-209ENST00000497216 E9PSI1 815 aa16.95■□□□□ 0.3
SPTAN1-209ENST00000497216 IFIT1P09914 478 aaKnown RBP16.95■□□□□ 0.3
SPTAN1-209ENST00000497216 CACNB3P54284 484 aa16.95■□□□□ 0.3
SPTAN1-209ENST00000497216 ERO1BQ86YB8 467 aa16.95■□□□□ 0.3
SPTAN1-209ENST00000497216 FAM43AQ8N2R8 423 aa16.95■□□□□ 0.3
SPTAN1-209ENST00000497216 KLHDC4Q8TBB5 520 aa16.95■□□□□ 0.3
SPTAN1-209ENST00000497216 SSH1Q8WYL5 1049 aa16.95■□□□□ 0.3
SPTAN1-209ENST00000497216 GCC1Q96CN9 775 aa16.95■□□□□ 0.3
SPTAN1-209ENST00000497216 OTUD5Q96G74 571 aa16.95■□□□□ 0.3
SPTAN1-209ENST00000497216 DOCK2Q92608 1830 aa16.95■□□□□ 0.3
SPTAN1-209ENST00000497216 CENPFP49454 3210 aa16.94■□□□□ 0.3
SPTAN1-209ENST00000497216 CETPP11597 493 aa16.94■□□□□ 0.3
SPTAN1-209ENST00000497216 RFX5P48382 616 aaPredicted RBP16.94■□□□□ 0.3
SPTAN1-209ENST00000497216 ZNF333Q96JL9 665 aa16.94■□□□□ 0.3
SPTAN1-209ENST00000497216 MYH2Q9UKX2 1941 aa16.94■□□□□ 0.3
SPTAN1-209ENST00000497216 EYA2O00167 538 aa16.93■□□□□ 0.3
SPTAN1-209ENST00000497216 PPIL2Q13356 520 aa16.93■□□□□ 0.3
SPTAN1-209ENST00000497216 DCAF15Q66K64 600 aa16.93■□□□□ 0.3
SPTAN1-209ENST00000497216 WDR66Q8TBY9 1149 aa16.93■□□□□ 0.3
SPTAN1-209ENST00000497216 LPIN2Q92539 896 aa16.93■□□□□ 0.3
SPTAN1-209ENST00000497216 WRNIP1Q96S55 665 aa16.93■□□□□ 0.3
SPTAN1-209ENST00000497216 FBXO3Q9UK99 471 aa16.93■□□□□ 0.3
SPTAN1-209ENST00000497216 TLR2O60603 784 aa16.92■□□□□ 0.3
SPTAN1-209ENST00000497216 WDHD1O75717 1129 aaPredicted RBP16.92■□□□□ 0.3
SPTAN1-209ENST00000497216 SLC5A1P13866 664 aa16.92■□□□□ 0.3
SPTAN1-209ENST00000497216 SNAPC2Q13487 334 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms