RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 ADMP35318 185 aa6.55□□□□□ -1.36
VPS26A-208ENST00000497022 FKBP4Q02790 459 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS26A-208ENST00000497022 LCE4AQ5TA78 99 aa6.55□□□□□ -1.36
VPS26A-208ENST00000497022 HGSNATQ68CP4 663 aa6.55□□□□□ -1.36
VPS26A-208ENST00000497022 CDPF1Q6NVV7 123 aa6.55□□□□□ -1.36
VPS26A-208ENST00000497022 SHISA5Q8N114 240 aa6.55□□□□□ -1.36
VPS26A-208ENST00000497022 C2CD4AQ8NCU7 369 aaPredicted RBP6.55□□□□□ -1.36
VPS26A-208ENST00000497022 GGNBP2Q9H3C7 697 aa6.55□□□□□ -1.36
VPS26A-208ENST00000497022 DBX1A6NMT0 343 aa6.54□□□□□ -1.36
VPS26A-208ENST00000497022 ABL1P00519 1130 aa6.54□□□□□ -1.36
VPS26A-208ENST00000497022 SF3B2Q13435 895 aaKnown RBP6.54□□□□□ -1.36
VPS26A-208ENST00000497022 DUSP27Q5VZP5 1158 aa6.54□□□□□ -1.36
VPS26A-208ENST00000497022 VN1R5Q7Z5H4 357 aa6.54□□□□□ -1.36
VPS26A-208ENST00000497022 C1orf127Q8N9H9 656 aa6.54□□□□□ -1.36
VPS26A-208ENST00000497022 GATA6Q92908 595 aa6.54□□□□□ -1.36
VPS26A-208ENST00000497022 DRD2P14416 443 aa6.53□□□□□ -1.36
VPS26A-208ENST00000497022 SOX4Q06945 474 aaPredicted RBP6.53□□□□□ -1.36
VPS26A-208ENST00000497022 AAMPQ13685 434 aa6.53□□□□□ -1.36
VPS26A-208ENST00000497022 C8orf34Q49A92 452 aa6.53□□□□□ -1.36
VPS26A-208ENST00000497022 FBLN7Q53RD9 439 aa6.53□□□□□ -1.36
VPS26A-208ENST00000497022 B4GALNT3Q6L9W6 998 aa6.53□□□□□ -1.36
VPS26A-208ENST00000497022 STK11IPQ8N1F8 1099 aa6.53□□□□□ -1.36
VPS26A-208ENST00000497022 RETREG2Q8NC44 543 aa6.53□□□□□ -1.36
VPS26A-208ENST00000497022 NXPE3Q969Y0 559 aa6.53□□□□□ -1.36
VPS26A-208ENST00000497022 HHIPQ96QV1 700 aa6.53□□□□□ -1.36
VPS26A-208ENST00000497022 ANO2Q9NQ90 1003 aa6.53□□□□□ -1.36
VPS26A-208ENST00000497022 POLIQ9UNA4 740 aa6.53□□□□□ -1.36
VPS26A-208ENST00000497022 A6NHS1 94 aa6.52□□□□□ -1.37
VPS26A-208ENST00000497022 FAM170BA6NMN3 283 aa6.52□□□□□ -1.37
VPS26A-208ENST00000497022 DLGAP3O95886 979 aa6.52□□□□□ -1.37
VPS26A-208ENST00000497022 ZNF211Q13398 564 aaPredicted RBP6.52□□□□□ -1.37
VPS26A-208ENST00000497022 MAP7Q14244 749 aa6.52□□□□□ -1.37
VPS26A-208ENST00000497022 TTC16Q8NEE8 873 aa6.52□□□□□ -1.37
VPS26A-208ENST00000497022 ZC3H7BQ9UGR2 993 aaKnown RBP6.52□□□□□ -1.37
VPS26A-208ENST00000497022 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.52□□□□□ -1.37
VPS26A-208ENST00000497022 FZD6O60353 706 aa6.51□□□□□ -1.37
VPS26A-208ENST00000497022 ZNF648Q5T619 568 aaPredicted RBP6.51□□□□□ -1.37
VPS26A-208ENST00000497022 SPOCD1Q6ZMY3 1216 aa6.51□□□□□ -1.37
VPS26A-208ENST00000497022 OSMRQ99650 979 aa6.51□□□□□ -1.37
VPS26A-208ENST00000497022 EGFL7Q9UHF1 273 aa6.51□□□□□ -1.37
VPS26A-208ENST00000497022 SLC5A6Q9Y289 635 aa6.51□□□□□ -1.37
VPS26A-208ENST00000497022 ICMTO60725 284 aa6.5□□□□□ -1.37
VPS26A-208ENST00000497022 TRPA1O75762 1119 aa6.5□□□□□ -1.37
VPS26A-208ENST00000497022 FARP2O94887 1054 aaPredicted RBP6.5□□□□□ -1.37
VPS26A-208ENST00000497022 ESRRAP11474 423 aaPredicted RBP6.5□□□□□ -1.37
VPS26A-208ENST00000497022 ADH5P11766 374 aa6.5□□□□□ -1.37
VPS26A-208ENST00000497022 USP5P45974 858 aa6.5□□□□□ -1.37
VPS26A-208ENST00000497022 PDE4CQ08493 712 aa6.5□□□□□ -1.37
VPS26A-208ENST00000497022 HP1BP3Q5SSJ5 553 aaPredicted RBP6.5□□□□□ -1.37
VPS26A-208ENST00000497022 ZKSCAN3Q9BRR0 538 aa6.5□□□□□ -1.37
VPS26A-208ENST00000497022 BHLHE41Q9C0J9 482 aaPredicted RBP6.5□□□□□ -1.37
VPS26A-208ENST00000497022 CHRDQ9H2X0 955 aa6.5□□□□□ -1.37
VPS26A-208ENST00000497022 CCDC87Q9NVE4 849 aa6.5□□□□□ -1.37
VPS26A-208ENST00000497022 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.5□□□□□ -1.37
VPS26A-208ENST00000497022 EDN3P14138 238 aa6.49□□□□□ -1.37
VPS26A-208ENST00000497022 SERPINB4P48594 390 aa6.49□□□□□ -1.37
VPS26A-208ENST00000497022 PLCL1Q15111 1095 aa6.49□□□□□ -1.37
VPS26A-208ENST00000497022 PKN1Q16512 942 aa6.49□□□□□ -1.37
VPS26A-208ENST00000497022 ZNF792Q3KQV3 632 aa6.49□□□□□ -1.37
VPS26A-208ENST00000497022 ZNF765Q7L2R6 523 aa6.49□□□□□ -1.37
VPS26A-208ENST00000497022 BCL7CQ8WUZ0 217 aaPredicted RBP6.49□□□□□ -1.37
VPS26A-208ENST00000497022 MISP3Q96FF7 219 aa6.49□□□□□ -1.37
VPS26A-208ENST00000497022 NRSN2Q9GZP1 204 aa6.49□□□□□ -1.37
VPS26A-208ENST00000497022 LRRC4CQ9HCJ2 640 aa6.49□□□□□ -1.37
VPS26A-208ENST00000497022 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.48□□□□□ -1.37
VPS26A-208ENST00000497022 TNFRSF21O75509 655 aa6.48□□□□□ -1.37
VPS26A-208ENST00000497022 EHHADHQ08426 723 aa6.48□□□□□ -1.37
VPS26A-208ENST00000497022 ECM1Q16610 540 aa6.48□□□□□ -1.37
VPS26A-208ENST00000497022 ATG4DQ86TL0 474 aaPredicted RBP6.48□□□□□ -1.37
VPS26A-208ENST00000497022 TXNDC2Q86VQ3 553 aa6.48□□□□□ -1.37
VPS26A-208ENST00000497022 KRTAP4-11Q9BYQ6 195 aa6.48□□□□□ -1.37
VPS26A-208ENST00000497022 SEMA6CQ9H3T2 930 aa6.48□□□□□ -1.37
VPS26A-208ENST00000497022 ACTL7BQ9Y614 415 aa6.48□□□□□ -1.37
VPS26A-208ENST00000497022 CARMIL2Q6F5E8 1435 aa6.48□□□□□ -1.37
VPS26A-208ENST00000497022 NFICP08651 508 aa6.47□□□□□ -1.37
VPS26A-208ENST00000497022 GSTM4Q03013 218 aa6.47□□□□□ -1.37
VPS26A-208ENST00000497022 ZNF124Q15973 351 aa6.47□□□□□ -1.37
VPS26A-208ENST00000497022 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
VPS26A-208ENST00000497022 WFDC3Q8IUB2 231 aa6.47□□□□□ -1.37
VPS26A-208ENST00000497022 GJD3Q8N144 294 aa6.47□□□□□ -1.37
VPS26A-208ENST00000497022 ACSS3Q9H6R3 686 aa6.47□□□□□ -1.37
VPS26A-208ENST00000497022 ZFYVE1Q9HBF4 777 aa6.47□□□□□ -1.37
VPS26A-208ENST00000497022 H3BRB1 525 aa6.46□□□□□ -1.38
VPS26A-208ENST00000497022 EREGO14944 169 aa6.46□□□□□ -1.38
VPS26A-208ENST00000497022 PHACTR2O75167 634 aa6.46□□□□□ -1.38
VPS26A-208ENST00000497022 GLYCTKQ8IVS8 523 aa6.46□□□□□ -1.38
VPS26A-208ENST00000497022 SNX29Q8TEQ0 813 aa6.46□□□□□ -1.38
VPS26A-208ENST00000497022 TUT1Q9H6E5 874 aaKnown RBP6.46□□□□□ -1.38
VPS26A-208ENST00000497022 FOXD3Q9UJU5 478 aaPredicted RBP6.46□□□□□ -1.38
VPS26A-208ENST00000497022 RAB6AP20340 208 aa6.45□□□□□ -1.38
VPS26A-208ENST00000497022 ARHGAP4P98171 946 aa6.45□□□□□ -1.38
VPS26A-208ENST00000497022 ASAP3Q8TDY4 903 aa6.45□□□□□ -1.38
VPS26A-208ENST00000497022 TMEM40Q8WWA1 233 aa6.45□□□□□ -1.38
VPS26A-208ENST00000497022 GSX1Q9H4S2 264 aaPredicted RBP6.45□□□□□ -1.38
VPS26A-208ENST00000497022 CYP11A1P05108 521 aa6.44□□□□□ -1.38
VPS26A-208ENST00000497022 FUT4P22083 530 aa6.44□□□□□ -1.38
VPS26A-208ENST00000497022 OGFOD3Q6PK18 319 aa6.44□□□□□ -1.38
VPS26A-208ENST00000497022 SEZ6L2Q6UXD5 910 aa6.44□□□□□ -1.38
VPS26A-208ENST00000497022 ZNF574Q6ZN55 896 aaPredicted RBP6.44□□□□□ -1.38
VPS26A-208ENST00000497022 SPRED2Q7Z698 418 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms