RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 SRCIN1Q9C0H9 1055 aa5.41□□□□□ -1.54
EXOSC3-208ENST00000496910 RBSNQ9H1K0 784 aa5.41□□□□□ -1.54
EXOSC3-208ENST00000496910 SH2B1Q9NRF2 756 aaPredicted RBP5.41□□□□□ -1.54
EXOSC3-208ENST00000496910 TRAK1Q9UPV9 953 aa5.41□□□□□ -1.54
EXOSC3-208ENST00000496910 SPG7Q9UQ90 795 aa5.41□□□□□ -1.54
EXOSC3-208ENST00000496910 ADCY10Q96PN6 1610 aa5.41□□□□□ -1.54
EXOSC3-208ENST00000496910 CDK12Q9NYV4 1490 aaPredicted RBP5.4□□□□□ -1.54
EXOSC3-208ENST00000496910 DEAF1O75398 565 aaPredicted RBP5.4□□□□□ -1.54
EXOSC3-208ENST00000496910 USP17L7P0C7H9 530 aa5.4□□□□□ -1.54
EXOSC3-208ENST00000496910 PTPRAP18433 802 aa5.4□□□□□ -1.54
EXOSC3-208ENST00000496910 RXRBP28702 533 aa5.4□□□□□ -1.54
EXOSC3-208ENST00000496910 PSMD2Q13200 908 aa5.4□□□□□ -1.54
EXOSC3-208ENST00000496910 HGSNATQ68CP4 663 aa5.4□□□□□ -1.54
EXOSC3-208ENST00000496910 GDF6Q6KF10 455 aaPredicted RBP5.4□□□□□ -1.54
EXOSC3-208ENST00000496910 NRSN2Q9GZP1 204 aa5.4□□□□□ -1.54
EXOSC3-208ENST00000496910 LACRTQ9GZZ8 138 aa5.4□□□□□ -1.54
EXOSC3-208ENST00000496910 ENAMQ9NRM1 1142 aa5.4□□□□□ -1.54
EXOSC3-208ENST00000496910 FAM8A1Q9UBU6 413 aa5.4□□□□□ -1.54
EXOSC3-208ENST00000496910 CNTNAP5Q8WYK1 1306 aa5.4□□□□□ -1.55
EXOSC3-208ENST00000496910 LRRC7Q96NW7 1537 aa5.39□□□□□ -1.55
EXOSC3-208ENST00000496910 UTRNP46939 3433 aa5.39□□□□□ -1.55
EXOSC3-208ENST00000496910 ESRRAP11474 423 aaPredicted RBP5.39□□□□□ -1.55
EXOSC3-208ENST00000496910 AMPD1P23109 780 aa5.39□□□□□ -1.55
EXOSC3-208ENST00000496910 EIF4BP23588 611 aaKnown RBP5.39□□□□□ -1.55
EXOSC3-208ENST00000496910 COL8A1P27658 744 aa5.39□□□□□ -1.55
EXOSC3-208ENST00000496910 GSK3AP49840 483 aa5.39□□□□□ -1.55
EXOSC3-208ENST00000496910 FCGRTP55899 365 aa5.39□□□□□ -1.55
EXOSC3-208ENST00000496910 SETDB1Q15047 1291 aa5.39□□□□□ -1.55
EXOSC3-208ENST00000496910 ZNF423Q2M1K9 1284 aa5.39□□□□□ -1.55
EXOSC3-208ENST00000496910 CACTIN-AS1Q8N1I8 211 aa5.39□□□□□ -1.55
EXOSC3-208ENST00000496910 IL22RA1Q8N6P7 574 aa5.39□□□□□ -1.55
EXOSC3-208ENST00000496910 NEDD1Q8NHV4 660 aa5.39□□□□□ -1.55
EXOSC3-208ENST00000496910 ARID4BQ4LE39 1312 aaPredicted RBP5.39□□□□□ -1.55
EXOSC3-208ENST00000496910 KIAA0556O60303 1618 aa5.38□□□□□ -1.55
EXOSC3-208ENST00000496910 H3BRJ5 948 aa5.38□□□□□ -1.55
EXOSC3-208ENST00000496910 GNB5O14775 395 aa5.38□□□□□ -1.55
EXOSC3-208ENST00000496910 SMARCA5O60264 1052 aaPredicted RBP5.38□□□□□ -1.55
EXOSC3-208ENST00000496910 SORBS3O60504 671 aa5.38□□□□□ -1.55
EXOSC3-208ENST00000496910 B3GALT4O96024 378 aa5.38□□□□□ -1.55
EXOSC3-208ENST00000496910 HSPA6P17066 643 aa5.38□□□□□ -1.55
EXOSC3-208ENST00000496910 CDC27P30260 824 aa5.38□□□□□ -1.55
EXOSC3-208ENST00000496910 GSTT1P30711 240 aa5.38□□□□□ -1.55
EXOSC3-208ENST00000496910 XPCQ01831 940 aaPredicted RBP5.38□□□□□ -1.55
EXOSC3-208ENST00000496910 RPS26P11Q5JNZ5 115 aaPredicted RBP5.38□□□□□ -1.55
EXOSC3-208ENST00000496910 MEI1Q5TIA1 1274 aa5.38□□□□□ -1.55
EXOSC3-208ENST00000496910 GALNT11Q8NCW6 608 aa5.38□□□□□ -1.55
EXOSC3-208ENST00000496910 ASAP3Q8TDY4 903 aa5.38□□□□□ -1.55
EXOSC3-208ENST00000496910 CRELD1Q96HD1 420 aa5.38□□□□□ -1.55
EXOSC3-208ENST00000496910 CLEC4MQ9H2X3 399 aaPredicted RBP5.38□□□□□ -1.55
EXOSC3-208ENST00000496910 SETD1BQ9UPS6 1966 aaKnown RBP5.38□□□□□ -1.55
EXOSC3-208ENST00000496910 A0A0A0MRY4 1105 aa5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 SOX1O00570 391 aaPredicted RBP5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 XRCC5P13010 732 aaKnown RBP5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 PCDH1Q08174 1060 aa5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 TXNDC11Q6PKC3 985 aa5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 WFDC8Q8IUA0 241 aa5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 DMRTC2Q8IXT2 367 aaPredicted RBP5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 SPATA32Q96LK8 384 aa5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 TRIM56Q9BRZ2 755 aaKnown RBP5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 POLR3GLQ9BT43 218 aa5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 PLVAPQ9BX97 442 aa5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 BACH2Q9BYV9 841 aa5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 RRAGCQ9HB90 399 aa5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 CWC22Q9HCG8 908 aaKnown RBP5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 MKL2Q9ULH7 1088 aa5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 PPM1HQ9ULR3 514 aa5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 PPME1Q9Y570 386 aa5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 USP31Q70CQ4 1352 aa5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 MAP3K4Q9Y6R4 1608 aa5.37□□□□□ -1.55
EXOSC3-208ENST00000496910 LINC01387J3KSC0 135 aa5.36□□□□□ -1.55
EXOSC3-208ENST00000496910 ENC1O14682 589 aa5.36□□□□□ -1.55
EXOSC3-208ENST00000496910 ADAM11O75078 769 aa5.36□□□□□ -1.55
EXOSC3-208ENST00000496910 TCF3P15923 654 aa5.36□□□□□ -1.55
EXOSC3-208ENST00000496910 ST13P50502 369 aaKnown RBP5.36□□□□□ -1.55
EXOSC3-208ENST00000496910 ZNF772Q68DY9 489 aaPredicted RBP5.36□□□□□ -1.55
EXOSC3-208ENST00000496910 FMR1NBQ8N0W7 255 aaPredicted RBP5.36□□□□□ -1.55
EXOSC3-208ENST00000496910 DTWD1Q8N5C7 304 aa5.36□□□□□ -1.55
EXOSC3-208ENST00000496910 WNT8BQ93098 351 aa5.36□□□□□ -1.55
EXOSC3-208ENST00000496910 DRC1Q96MC2 740 aa5.36□□□□□ -1.55
EXOSC3-208ENST00000496910 SOX17Q9H6I2 414 aaPredicted RBP5.36□□□□□ -1.55
EXOSC3-208ENST00000496910 SEC31BQ9NQW1 1179 aa5.36□□□□□ -1.55
EXOSC3-208ENST00000496910 PTPRKQ15262 1439 aa5.36□□□□□ -1.55
EXOSC3-208ENST00000496910 PLB1Q6P1J6 1458 aa5.36□□□□□ -1.55
EXOSC3-208ENST00000496910 FAM229AH3BQW9 127 aa5.35□□□□□ -1.55
EXOSC3-208ENST00000496910 FSCN2O14926 492 aa5.35□□□□□ -1.55
EXOSC3-208ENST00000496910 PAGE1O75459 146 aa5.35□□□□□ -1.55
EXOSC3-208ENST00000496910 FOXD4L6Q3SYB3 417 aaPredicted RBP5.35□□□□□ -1.55
EXOSC3-208ENST00000496910 RASIP1Q5U651 963 aa5.35□□□□□ -1.55
EXOSC3-208ENST00000496910 FOXD4L3Q6VB84 417 aaPredicted RBP5.35□□□□□ -1.55
EXOSC3-208ENST00000496910 DTHD1Q6ZMT9 781 aa5.35□□□□□ -1.55
EXOSC3-208ENST00000496910 FBXO11Q86XK2 927 aa5.35□□□□□ -1.55
EXOSC3-208ENST00000496910 STK35Q8TDR2 534 aa5.35□□□□□ -1.55
EXOSC3-208ENST00000496910 SREK1Q8WXA9 508 aaKnown RBP5.35□□□□□ -1.55
EXOSC3-208ENST00000496910 NECAB3Q96P71 396 aaPredicted RBP5.35□□□□□ -1.55
EXOSC3-208ENST00000496910 CARD10Q9BWT7 1032 aa5.35□□□□□ -1.55
EXOSC3-208ENST00000496910 KCNK4Q9NYG8 393 aa5.35□□□□□ -1.55
EXOSC3-208ENST00000496910 VTI1BQ9UEU0 232 aa5.35□□□□□ -1.55
EXOSC3-208ENST00000496910 KIAA1210Q9ULL0 1709 aa5.34□□□□□ -1.55
EXOSC3-208ENST00000496910 TARBP1Q13395 1621 aaKnown RBP5.34□□□□□ -1.55
EXOSC3-208ENST00000496910 FBXO24O75426 580 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms