RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 ADM5C9JUS6 153 aa23.59■■□□□ 1.37
CTDSP1-213ENST00000496785 TNFAIP1Q13829 316 aa23.59■■□□□ 1.37
CTDSP1-213ENST00000496785 HHIPL2Q6UWX4 724 aa23.59■■□□□ 1.37
CTDSP1-213ENST00000496785 SLF2Q8IX21 1173 aa23.59■■□□□ 1.37
CTDSP1-213ENST00000496785 SPATA5Q8NB90 893 aa23.59■■□□□ 1.37
CTDSP1-213ENST00000496785 EAF2Q96CJ1 260 aaPredicted RBP23.59■■□□□ 1.37
CTDSP1-213ENST00000496785 ZNF408Q9H9D4 720 aa23.59■■□□□ 1.37
CTDSP1-213ENST00000496785 DBNLQ9UJU6 430 aaKnown RBP23.59■■□□□ 1.37
CTDSP1-213ENST00000496785 APBB1O00213 710 aa23.58■■□□□ 1.37
CTDSP1-213ENST00000496785 ZDHHC15Q96MV8 337 aa23.58■■□□□ 1.37
CTDSP1-213ENST00000496785 CCDC8Q9H0W5 538 aaPredicted RBP23.58■■□□□ 1.37
CTDSP1-213ENST00000496785 IL1RAPL2Q9NP60 686 aa23.58■■□□□ 1.37
CTDSP1-213ENST00000496785 HMG20BQ9P0W2 317 aa23.58■■□□□ 1.37
CTDSP1-213ENST00000496785 ABCF2Q9UG63 623 aa23.58■■□□□ 1.37
CTDSP1-213ENST00000496785 ABT1Q9ULW3 272 aaKnown RBP23.58■■□□□ 1.37
CTDSP1-213ENST00000496785 SUPT16HQ9Y5B9 1047 aaKnown RBP23.58■■□□□ 1.37
CTDSP1-213ENST00000496785 PPP2R3BQ9Y5P8 575 aa23.58■■□□□ 1.37
CTDSP1-213ENST00000496785 ECM29Q5VYK3 1845 aa23.58■■□□□ 1.37
CTDSP1-213ENST00000496785 IGSF3O75054 1194 aa23.57■■□□□ 1.36
CTDSP1-213ENST00000496785 IFIT2P09913 472 aaKnown RBP23.57■■□□□ 1.36
CTDSP1-213ENST00000496785 PRDX5P30044 214 aa23.57■■□□□ 1.36
CTDSP1-213ENST00000496785 NF2P35240 595 aa23.57■■□□□ 1.36
CTDSP1-213ENST00000496785 HTRA3P83110 453 aa23.57■■□□□ 1.36
CTDSP1-213ENST00000496785 GRIK5Q16478 980 aa23.57■■□□□ 1.36
CTDSP1-213ENST00000496785 DZIP1Q86YF9 867 aaKnown RBP23.57■■□□□ 1.36
CTDSP1-213ENST00000496785 CDCA5Q96FF9 252 aa23.57■■□□□ 1.36
CTDSP1-213ENST00000496785 PRMT6Q96LA8 375 aaPredicted RBP23.57■■□□□ 1.36
CTDSP1-213ENST00000496785 LRRCC1Q9C099 1032 aa23.57■■□□□ 1.36
CTDSP1-213ENST00000496785 TMOD2Q9NZR1 351 aa23.57■■□□□ 1.36
CTDSP1-213ENST00000496785 MCAMP43121 646 aa23.56■■□□□ 1.36
CTDSP1-213ENST00000496785 FMR1Q06787 632 aaKnown RBP eCLIP23.56■■□□□ 1.36
CTDSP1-213ENST00000496785 CST9Q5W186 159 aa23.56■■□□□ 1.36
CTDSP1-213ENST00000496785 ERICH6Q7L0X2 663 aa23.56■■□□□ 1.36
CTDSP1-213ENST00000496785 POLR2AP24928 1970 aaKnown RBP23.55■■□□□ 1.36
CTDSP1-213ENST00000496785 SPDYE2Q495Y8 402 aa23.55■■□□□ 1.36
CTDSP1-213ENST00000496785 C2orf69Q8N8R5 385 aa23.55■■□□□ 1.36
CTDSP1-213ENST00000496785 KLRG1Q96E93 195 aa23.55■■□□□ 1.36
CTDSP1-213ENST00000496785 DCTPP1Q9H773 170 aa23.55■■□□□ 1.36
CTDSP1-213ENST00000496785 VEZTQ9HBM0 779 aa23.55■■□□□ 1.36
CTDSP1-213ENST00000496785 CLRN2A0PK11 232 aa23.54■■□□□ 1.36
CTDSP1-213ENST00000496785 TNNI2P48788 182 aa23.54■■□□□ 1.36
CTDSP1-213ENST00000496785 TDRD3Q9H7E2 651 aaKnown RBP23.54■■□□□ 1.36
CTDSP1-213ENST00000496785 GBA2Q9HCG7 927 aaPredicted RBP23.54■■□□□ 1.36
CTDSP1-213ENST00000496785 TLR7Q9NYK1 1049 aaKnown RBP23.54■■□□□ 1.36
CTDSP1-213ENST00000496785 ZNF70Q9UC06 446 aaPredicted RBP23.54■■□□□ 1.36
CTDSP1-213ENST00000496785 PCDHB15Q9Y5E8 787 aa23.54■■□□□ 1.36
CTDSP1-213ENST00000496785 TLL2Q9Y6L7 1015 aa23.54■■□□□ 1.36
CTDSP1-213ENST00000496785 FKBP1BP68106 108 aa23.53■■□□□ 1.36
CTDSP1-213ENST00000496785 GSTO1P78417 241 aa23.53■■□□□ 1.36
CTDSP1-213ENST00000496785 DEFB115Q30KQ5 88 aa23.53■■□□□ 1.36
CTDSP1-213ENST00000496785 DNAJC5GQ8N7S2 189 aa23.53■■□□□ 1.36
CTDSP1-213ENST00000496785 HHIPL1Q96JK4 782 aa23.53■■□□□ 1.36
CTDSP1-213ENST00000496785 PCDHAC2Q9Y5I4 1007 aa23.53■■□□□ 1.36
CTDSP1-213ENST00000496785 CNTNAP1P78357 1384 aa23.52■■□□□ 1.36
CTDSP1-213ENST00000496785 RASSF10A6NK89 507 aa23.52■■□□□ 1.36
CTDSP1-213ENST00000496785 DEFB129Q9H1M3 183 aa23.52■■□□□ 1.36
CTDSP1-213ENST00000496785 LRP2BPQ9P2M1 347 aa23.52■■□□□ 1.36
CTDSP1-213ENST00000496785 LDHCP07864 332 aa23.51■■□□□ 1.35
CTDSP1-213ENST00000496785 PI16Q6UXB8 463 aa23.51■■□□□ 1.35
CTDSP1-213ENST00000496785 RAI14Q9P0K7 980 aa23.51■■□□□ 1.35
CTDSP1-213ENST00000496785 MKRN1Q9UHC7 482 aaKnown RBP23.51■■□□□ 1.35
CTDSP1-213ENST00000496785 DAGLAQ9Y4D2 1042 aa23.51■■□□□ 1.35
CTDSP1-213ENST00000496785 ECE1P42892 770 aa23.5■■□□□ 1.35
CTDSP1-213ENST00000496785 DIXDC1Q155Q3 683 aa23.5■■□□□ 1.35
CTDSP1-213ENST00000496785 FKBP1CQ5VVH2 108 aa23.5■■□□□ 1.35
CTDSP1-213ENST00000496785 APOBEC3HQ6NTF7 200 aaKnown RBP23.5■■□□□ 1.35
CTDSP1-213ENST00000496785 SAPCD2Q86UD0 394 aa23.5■■□□□ 1.35
CTDSP1-213ENST00000496785 FAM163AQ96GL9 167 aaPredicted RBP23.5■■□□□ 1.35
CTDSP1-213ENST00000496785 ZBTB47Q9UFB7 747 aaPredicted RBP23.5■■□□□ 1.35
CTDSP1-213ENST00000496785 SUPT20HL1Q3ZLR7 823 aa23.49■■□□□ 1.35
CTDSP1-213ENST00000496785 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.49■■□□□ 1.35
CTDSP1-213ENST00000496785 SNRKQ9NRH2 765 aa23.49■■□□□ 1.35
CTDSP1-213ENST00000496785 SCAF8Q9UPN6 1271 aaKnown RBP23.49■■□□□ 1.35
CTDSP1-213ENST00000496785 GAKO14976 1311 aa23.49■■□□□ 1.35
CTDSP1-213ENST00000496785 PAPPA2Q9BXP8 1791 aa23.48■■□□□ 1.35
CTDSP1-213ENST00000496785 ZAP70P43403 619 aa23.48■■□□□ 1.35
CTDSP1-213ENST00000496785 HUNKP57058 714 aa23.48■■□□□ 1.35
CTDSP1-213ENST00000496785 MECOMQ03112 1051 aa23.48■■□□□ 1.35
CTDSP1-213ENST00000496785 HDAC1Q13547 482 aaPredicted RBP23.48■■□□□ 1.35
CTDSP1-213ENST00000496785 RASA3Q14644 834 aa23.48■■□□□ 1.35
CTDSP1-213ENST00000496785 TMED8Q6PL24 325 aaPredicted RBP23.48■■□□□ 1.35
CTDSP1-213ENST00000496785 DLK2Q6UY11 383 aa23.48■■□□□ 1.35
CTDSP1-213ENST00000496785 PAXIP1Q6ZW49 1069 aaPredicted RBP23.48■■□□□ 1.35
CTDSP1-213ENST00000496785 BCL11AQ9H165 835 aa23.48■■□□□ 1.35
CTDSP1-213ENST00000496785 TTF1Q15361 905 aaPredicted RBP23.47■■□□□ 1.35
CTDSP1-213ENST00000496785 TBC1D9Q6ZT07 1266 aa23.47■■□□□ 1.35
CTDSP1-213ENST00000496785 FAM83AQ86UY5 434 aa23.47■■□□□ 1.35
CTDSP1-213ENST00000496785 GCC1Q96CN9 775 aa23.47■■□□□ 1.35
CTDSP1-213ENST00000496785 GPATCH3Q96I76 525 aa23.47■■□□□ 1.35
CTDSP1-213ENST00000496785 MROH7-TTC4A0A0A0MT08 1334 aa23.47■■□□□ 1.35
CTDSP1-213ENST00000496785 TCP10L2B9ZVM9 353 aa23.46■■□□□ 1.35
CTDSP1-213ENST00000496785 MAP4K4O95819 1239 aaPredicted RBP23.46■■□□□ 1.35
CTDSP1-213ENST00000496785 CYP2E1P05181 493 aaPredicted RBP23.46■■□□□ 1.35
CTDSP1-213ENST00000496785 AOX1Q06278 1338 aa23.46■■□□□ 1.35
CTDSP1-213ENST00000496785 TTLL12Q14166 644 aaPredicted RBP23.46■■□□□ 1.35
CTDSP1-213ENST00000496785 ARMC9Q7Z3E5 817 aa23.46■■□□□ 1.35
CTDSP1-213ENST00000496785 EXOC6Q8TAG9 804 aa23.46■■□□□ 1.35
CTDSP1-213ENST00000496785 NSUN4Q96CB9 384 aaKnown RBP23.46■■□□□ 1.35
CTDSP1-213ENST00000496785 HOOK2Q96ED9 719 aa23.46■■□□□ 1.35
CTDSP1-213ENST00000496785 NOL10Q9BSC4 688 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms