RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 SMC4Q9NTJ3 1288 aa13.66□□□□□ -0.22
RNF220-217ENST00000496262 SERPINA10Q9UK55 444 aa13.66□□□□□ -0.22
RNF220-217ENST00000496262 HPS5Q9UPZ3 1129 aa13.66□□□□□ -0.22
RNF220-217ENST00000496262 ECM29Q5VYK3 1845 aa13.65□□□□□ -0.22
RNF220-217ENST00000496262 MANSC4A6NHS7 340 aaPredicted RBP13.65□□□□□ -0.22
RNF220-217ENST00000496262 FKTNO75072 461 aa13.65□□□□□ -0.22
RNF220-217ENST00000496262 BCAMP50895 628 aa13.65□□□□□ -0.22
RNF220-217ENST00000496262 SLFN5Q08AF3 891 aa13.65□□□□□ -0.22
RNF220-217ENST00000496262 TNFAIP1Q13829 316 aa13.65□□□□□ -0.22
RNF220-217ENST00000496262 MAP3K11Q16584 847 aa13.65□□□□□ -0.22
RNF220-217ENST00000496262 FBXO33Q7Z6M2 555 aa13.65□□□□□ -0.22
RNF220-217ENST00000496262 IFNL1Q8IU54 200 aa13.65□□□□□ -0.22
RNF220-217ENST00000496262 USP44Q9H0E7 712 aa13.65□□□□□ -0.22
RNF220-217ENST00000496262 ELP3Q9H9T3 547 aa13.65□□□□□ -0.22
RNF220-217ENST00000496262 USP2O75604 605 aaPredicted RBP13.64□□□□□ -0.23
RNF220-217ENST00000496262 PDE8BO95263 885 aa13.64□□□□□ -0.23
RNF220-217ENST00000496262 ZBTB48P10074 688 aaPredicted RBP13.64□□□□□ -0.23
RNF220-217ENST00000496262 CACNB3P54284 484 aa13.64□□□□□ -0.23
RNF220-217ENST00000496262 VGLL2Q8N8G2 317 aa13.64□□□□□ -0.23
RNF220-217ENST00000496262 TMEM39BQ9GZU3 492 aa13.64□□□□□ -0.23
RNF220-217ENST00000496262 ARAP2Q8WZ64 1704 aa13.64□□□□□ -0.23
RNF220-217ENST00000496262 IGF2BP3O00425 579 aaKnown RBP eCLIP13.63□□□□□ -0.23
RNF220-217ENST00000496262 ALDH1A1P00352 501 aa13.63□□□□□ -0.23
RNF220-217ENST00000496262 GJA5P36382 358 aa13.63□□□□□ -0.23
RNF220-217ENST00000496262 PUM3Q15397 648 aaKnown RBP13.63□□□□□ -0.23
RNF220-217ENST00000496262 ANKRD13AQ8IZ07 590 aa13.63□□□□□ -0.23
RNF220-217ENST00000496262 SIL1Q9H173 461 aa13.63□□□□□ -0.23
RNF220-217ENST00000496262 TNRC18O15417 2968 aaPredicted RBP13.62□□□□□ -0.23
RNF220-217ENST00000496262 IFIT1P09914 478 aaKnown RBP13.62□□□□□ -0.23
RNF220-217ENST00000496262 TNNI2P48788 182 aa13.62□□□□□ -0.23
RNF220-217ENST00000496262 PKN2Q16513 984 aaKnown RBP13.62□□□□□ -0.23
RNF220-217ENST00000496262 ALDH1L2Q3SY69 923 aa13.62□□□□□ -0.23
RNF220-217ENST00000496262 TBC1D22AQ8WUA7 517 aa13.62□□□□□ -0.23
RNF220-217ENST00000496262 TEKT1Q969V4 418 aa13.62□□□□□ -0.23
RNF220-217ENST00000496262 OPTNQ96CV9 577 aa13.62□□□□□ -0.23
RNF220-217ENST00000496262 EYA2O00167 538 aa13.61□□□□□ -0.23
RNF220-217ENST00000496262 INHBEP58166 350 aa13.61□□□□□ -0.23
RNF220-217ENST00000496262 CNKSR2Q8WXI2 1034 aa13.61□□□□□ -0.23
RNF220-217ENST00000496262 TEPSINQ96N21 525 aa13.61□□□□□ -0.23
RNF220-217ENST00000496262 TRIM17Q9Y577 477 aa13.61□□□□□ -0.23
RNF220-217ENST00000496262 UBTFL1P0CB47 393 aaPredicted RBP13.6□□□□□ -0.23
RNF220-217ENST00000496262 SLC5A1P13866 664 aa13.6□□□□□ -0.23
RNF220-217ENST00000496262 RFX5P48382 616 aaPredicted RBP13.6□□□□□ -0.23
RNF220-217ENST00000496262 CRHR2Q13324 411 aa13.6□□□□□ -0.23
RNF220-217ENST00000496262 VGLL4Q14135 290 aa13.6□□□□□ -0.23
RNF220-217ENST00000496262 NOM1Q5C9Z4 860 aaKnown RBP13.6□□□□□ -0.23
RNF220-217ENST00000496262 FBXO46Q6PJ61 603 aaPredicted RBP13.6□□□□□ -0.23
RNF220-217ENST00000496262 CFHR5Q9BXR6 569 aa13.6□□□□□ -0.23
RNF220-217ENST00000496262 TMOD2Q9NZR1 351 aa13.6□□□□□ -0.23
RNF220-217ENST00000496262 NOB1Q9ULX3 412 aaKnown RBP13.6□□□□□ -0.23
RNF220-217ENST00000496262 OTOFQ9HC10 1997 aa13.6□□□□□ -0.23
RNF220-217ENST00000496262 UNCXA6NJT0 531 aa13.59□□□□□ -0.23
RNF220-217ENST00000496262 FGFR2P21802 821 aa13.59□□□□□ -0.23
RNF220-217ENST00000496262 OTUD7BQ6GQQ9 843 aa13.59□□□□□ -0.23
RNF220-217ENST00000496262 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.59□□□□□ -0.23
RNF220-217ENST00000496262 OTUD5Q96G74 571 aa13.59□□□□□ -0.23
RNF220-217ENST00000496262 PTPN18Q99952 460 aa13.59□□□□□ -0.23
RNF220-217ENST00000496262 PPP4R2Q9NY27 417 aa13.59□□□□□ -0.23
RNF220-217ENST00000496262 CSADQ9Y600 493 aa13.59□□□□□ -0.23
RNF220-217ENST00000496262 MAP3K9P80192 1104 aa13.58□□□□□ -0.24
RNF220-217ENST00000496262 HDLBPQ00341 1268 aaKnown RBP13.58□□□□□ -0.24
RNF220-217ENST00000496262 MAPK8IP2Q13387 824 aaPredicted RBP13.58□□□□□ -0.24
RNF220-217ENST00000496262 ATG9AQ7Z3C6 839 aa13.58□□□□□ -0.24
RNF220-217ENST00000496262 CD99L2Q8TCZ2 262 aa13.58□□□□□ -0.24
RNF220-217ENST00000496262 LPIN2Q92539 896 aa13.58□□□□□ -0.24
RNF220-217ENST00000496262 LRRFIP2Q9Y608 721 aaKnown RBP13.58□□□□□ -0.24
RNF220-217ENST00000496262 MAST3O60307 1309 aa13.58□□□□□ -0.24
RNF220-217ENST00000496262 CCL15-CCL14A0A0B4J2E2 113 aa13.57□□□□□ -0.24
RNF220-217ENST00000496262 DIXDC1Q155Q3 683 aa13.57□□□□□ -0.24
RNF220-217ENST00000496262 CCL15Q16663 113 aa13.57□□□□□ -0.24
RNF220-217ENST00000496262 ATP2B3Q16720 1220 aa13.57□□□□□ -0.24
RNF220-217ENST00000496262 APOBEC3HQ6NTF7 200 aaKnown RBP13.57□□□□□ -0.24
RNF220-217ENST00000496262 OTOP1Q7RTM1 612 aa13.57□□□□□ -0.24
RNF220-217ENST00000496262 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.57□□□□□ -0.24
RNF220-217ENST00000496262 ZDHHC15Q96MV8 337 aa13.57□□□□□ -0.24
RNF220-217ENST00000496262 WRNIP1Q96S55 665 aa13.57□□□□□ -0.24
RNF220-217ENST00000496262 PA2G4Q9UQ80 394 aaKnown RBP13.57□□□□□ -0.24
RNF220-217ENST00000496262 ZBED9Q6R2W3 1325 aa13.57□□□□□ -0.24
RNF220-217ENST00000496262 KIF16BQ96L93 1317 aa13.57□□□□□ -0.24
RNF220-217ENST00000496262 GTF2A2P52657 109 aa13.56□□□□□ -0.24
RNF220-217ENST00000496262 MIGA2Q7L4E1 593 aa13.56□□□□□ -0.24
RNF220-217ENST00000496262 TRMT2AQ8IZ69 625 aaKnown RBP13.56□□□□□ -0.24
RNF220-217ENST00000496262 WDR66Q8TBY9 1149 aa13.56□□□□□ -0.24
RNF220-217ENST00000496262 BRI3BPQ8WY22 251 aa13.56□□□□□ -0.24
RNF220-217ENST00000496262 ZKSCAN4Q969J2 545 aaPredicted RBP13.56□□□□□ -0.24
RNF220-217ENST00000496262 ERO1AQ96HE7 468 aa13.56□□□□□ -0.24
RNF220-217ENST00000496262 MS4A4AQ96JQ5 239 aa13.56□□□□□ -0.24
RNF220-217ENST00000496262 API5Q9BZZ5 524 aaKnown RBP13.56□□□□□ -0.24
RNF220-217ENST00000496262 CEP126Q9P2H0 1117 aa13.56□□□□□ -0.24
RNF220-217ENST00000496262 HTTP42858 3142 aa13.55□□□□□ -0.24
RNF220-217ENST00000496262 TESPA1A2RU30 521 aaPredicted RBP13.55□□□□□ -0.24
RNF220-217ENST00000496262 PRDX5P30044 214 aa13.55□□□□□ -0.24
RNF220-217ENST00000496262 IRX6P78412 446 aaPredicted RBP13.55□□□□□ -0.24
RNF220-217ENST00000496262 TCP10Q12799 353 aa13.55□□□□□ -0.24
RNF220-217ENST00000496262 TAF1CQ15572 869 aaPredicted RBP13.55□□□□□ -0.24
RNF220-217ENST00000496262 HHIPL2Q6UWX4 724 aa13.55□□□□□ -0.24
RNF220-217ENST00000496262 ERICH6Q7L0X2 663 aa13.55□□□□□ -0.24
RNF220-217ENST00000496262 FAM43AQ8N2R8 423 aa13.55□□□□□ -0.24
RNF220-217ENST00000496262 MEIS3Q99687 375 aa13.55□□□□□ -0.24
RNF220-217ENST00000496262 GNL3LQ9NVN8 582 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms