RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 ZKSCAN2Q63HK3 967 aa13.05□□□□□ -0.32
ERGIC3-219ENST00000496172 MEIS3Q99687 375 aa13.05□□□□□ -0.32
ERGIC3-219ENST00000496172 PTPN22Q9Y2R2 807 aa13.05□□□□□ -0.32
ERGIC3-219ENST00000496172 FAM205AQ6ZU69 1335 aa13.05□□□□□ -0.32
ERGIC3-219ENST00000496172 COL1A1P02452 1464 aaPredicted RBP13.04□□□□□ -0.32
ERGIC3-219ENST00000496172 CIAO1O76071 339 aa13.04□□□□□ -0.32
ERGIC3-219ENST00000496172 SLC5A1P13866 664 aa13.04□□□□□ -0.32
ERGIC3-219ENST00000496172 MFSD14BQ5SR56 506 aa13.04□□□□□ -0.32
ERGIC3-219ENST00000496172 LDLRAD1Q5T700 205 aa13.04□□□□□ -0.32
ERGIC3-219ENST00000496172 SPRYD7Q5W111 196 aa13.04□□□□□ -0.32
ERGIC3-219ENST00000496172 FBXO33Q7Z6M2 555 aa13.04□□□□□ -0.32
ERGIC3-219ENST00000496172 APOBEC3FQ8IUX4 373 aaKnown RBP13.04□□□□□ -0.32
ERGIC3-219ENST00000496172 CERS5Q8N5B7 392 aa13.04□□□□□ -0.32
ERGIC3-219ENST00000496172 VGLL2Q8N8G2 317 aa13.04□□□□□ -0.32
ERGIC3-219ENST00000496172 CEP126Q9P2H0 1117 aa13.04□□□□□ -0.32
ERGIC3-219ENST00000496172 JAG2Q9Y219 1238 aa13.04□□□□□ -0.32
ERGIC3-219ENST00000496172 MANSC4A6NHS7 340 aaPredicted RBP13.03□□□□□ -0.32
ERGIC3-219ENST00000496172 RBM5P52756 815 aaKnown RBP eCLIP13.03□□□□□ -0.32
ERGIC3-219ENST00000496172 MTMR14Q8NCE2 650 aa13.03□□□□□ -0.32
ERGIC3-219ENST00000496172 TBC1D22AQ8WUA7 517 aa13.03□□□□□ -0.32
ERGIC3-219ENST00000496172 LPIN2Q92539 896 aa13.03□□□□□ -0.32
ERGIC3-219ENST00000496172 CLUAP1Q96AJ1 413 aa13.03□□□□□ -0.32
ERGIC3-219ENST00000496172 OTUD5Q96G74 571 aa13.03□□□□□ -0.32
ERGIC3-219ENST00000496172 ERO1AQ96HE7 468 aa13.03□□□□□ -0.32
ERGIC3-219ENST00000496172 SIL1Q9H173 461 aa13.03□□□□□ -0.32
ERGIC3-219ENST00000496172 SRGAP3O43295 1099 aa13.02□□□□□ -0.33
ERGIC3-219ENST00000496172 GNAI2P04899 355 aa13.02□□□□□ -0.33
ERGIC3-219ENST00000496172 ZBTB48P10074 688 aaPredicted RBP13.02□□□□□ -0.33
ERGIC3-219ENST00000496172 EN2P19622 333 aaPredicted RBP13.02□□□□□ -0.33
ERGIC3-219ENST00000496172 IL15P40933 162 aaPredicted RBP13.02□□□□□ -0.33
ERGIC3-219ENST00000496172 CHAF1AQ13111 956 aaPredicted RBP13.02□□□□□ -0.33
ERGIC3-219ENST00000496172 CFAP100Q494V2 611 aa13.02□□□□□ -0.33
ERGIC3-219ENST00000496172 ARMC9Q7Z3E5 817 aa13.02□□□□□ -0.33
ERGIC3-219ENST00000496172 IFNL1Q8IU54 200 aa13.02□□□□□ -0.33
ERGIC3-219ENST00000496172 FTSJ3Q8IY81 847 aaKnown RBP13.02□□□□□ -0.33
ERGIC3-219ENST00000496172 SCAF8Q9UPN6 1271 aaKnown RBP13.02□□□□□ -0.33
ERGIC3-219ENST00000496172 ECM29Q5VYK3 1845 aa13.02□□□□□ -0.33
ERGIC3-219ENST00000496172 A0A0C4DFX4 3053 aa13.02□□□□□ -0.33
ERGIC3-219ENST00000496172 FGFR2P21802 821 aa13.01□□□□□ -0.33
ERGIC3-219ENST00000496172 BCAMP50895 628 aa13.01□□□□□ -0.33
ERGIC3-219ENST00000496172 MKRN3Q13064 507 aaKnown RBP13.01□□□□□ -0.33
ERGIC3-219ENST00000496172 TTLL12Q14166 644 aaPredicted RBP13.01□□□□□ -0.33
ERGIC3-219ENST00000496172 ATG9AQ7Z3C6 839 aa13.01□□□□□ -0.33
ERGIC3-219ENST00000496172 ZBED3Q96IU2 234 aaPredicted RBP13.01□□□□□ -0.33
ERGIC3-219ENST00000496172 ZNF333Q96JL9 665 aa13.01□□□□□ -0.33
ERGIC3-219ENST00000496172 COPRSQ9NQ92 184 aa13.01□□□□□ -0.33
ERGIC3-219ENST00000496172 GNL3LQ9NVN8 582 aaKnown RBP13.01□□□□□ -0.33
ERGIC3-219ENST00000496172 TTF2Q9UNY4 1162 aaKnown RBP13.01□□□□□ -0.33
ERGIC3-219ENST00000496172 IQSEC3Q9UPP2 1182 aaPredicted RBP13.01□□□□□ -0.33
ERGIC3-219ENST00000496172 COL6A3P12111 3177 aa13.01□□□□□ -0.33
ERGIC3-219ENST00000496172 SPDYE2BA6NHP3 402 aa13□□□□□ -0.33
ERGIC3-219ENST00000496172 UNCXA6NJT0 531 aa13□□□□□ -0.33
ERGIC3-219ENST00000496172 DLL1O00548 723 aa13□□□□□ -0.33
ERGIC3-219ENST00000496172 SPDYE6P0CI01 402 aa13□□□□□ -0.33
ERGIC3-219ENST00000496172 MAP3K11Q16584 847 aa13□□□□□ -0.33
ERGIC3-219ENST00000496172 ATP2B3Q16720 1220 aa13□□□□□ -0.33
ERGIC3-219ENST00000496172 PRAMEF18Q5VWM3 479 aa13□□□□□ -0.33
ERGIC3-219ENST00000496172 TMEM57Q8N5G2 664 aa13□□□□□ -0.33
ERGIC3-219ENST00000496172 SERPINA10Q9UK55 444 aa13□□□□□ -0.33
ERGIC3-219ENST00000496172 IGF2BP3O00425 579 aaKnown RBP eCLIP12.99□□□□□ -0.33
ERGIC3-219ENST00000496172 MTX1Q13505 466 aa12.99□□□□□ -0.33
ERGIC3-219ENST00000496172 DZIP1LQ8IYY4 767 aaKnown RBP12.99□□□□□ -0.33
ERGIC3-219ENST00000496172 PRMT6Q96LA8 375 aaPredicted RBP12.99□□□□□ -0.33
ERGIC3-219ENST00000496172 TMEM106CQ9BVX2 250 aa12.99□□□□□ -0.33
ERGIC3-219ENST00000496172 DEFB129Q9H1M3 183 aa12.99□□□□□ -0.33
ERGIC3-219ENST00000496172 VEZTQ9HBM0 779 aa12.99□□□□□ -0.33
ERGIC3-219ENST00000496172 PA2G4Q9UQ80 394 aaKnown RBP12.99□□□□□ -0.33
ERGIC3-219ENST00000496172 TNNQ9UQP3 1299 aa12.99□□□□□ -0.33
ERGIC3-219ENST00000496172 AKAP2Q9Y2D5 859 aa12.99□□□□□ -0.33
ERGIC3-219ENST00000496172 PPP2R3BQ9Y5P8 575 aa12.99□□□□□ -0.33
ERGIC3-219ENST00000496172 MAST3O60307 1309 aa12.98□□□□□ -0.33
ERGIC3-219ENST00000496172 CLRN2A0PK11 232 aa12.98□□□□□ -0.33
ERGIC3-219ENST00000496172 CRKP46108 304 aa12.98□□□□□ -0.33
ERGIC3-219ENST00000496172 TNFAIP1Q13829 316 aa12.98□□□□□ -0.33
ERGIC3-219ENST00000496172 ITPRIPQ8IWB1 547 aa12.98□□□□□ -0.33
ERGIC3-219ENST00000496172 WDR66Q8TBY9 1149 aa12.98□□□□□ -0.33
ERGIC3-219ENST00000496172 EFCC1Q9HA90 598 aa12.98□□□□□ -0.33
ERGIC3-219ENST00000496172 SUGT1Q9Y2Z0 365 aa12.98□□□□□ -0.33
ERGIC3-219ENST00000496172 SSC5DA1L4H1 1573 aa12.98□□□□□ -0.33
ERGIC3-219ENST00000496172 H0YGN5 161 aa12.97□□□□□ -0.33
ERGIC3-219ENST00000496172 MS4A1P11836 297 aa12.97□□□□□ -0.33
ERGIC3-219ENST00000496172 HDLBPQ00341 1268 aaKnown RBP12.97□□□□□ -0.33
ERGIC3-219ENST00000496172 G3BP1Q13283 466 aaKnown RBP eCLIP12.97□□□□□ -0.33
ERGIC3-219ENST00000496172 SUPT20HL1Q3ZLR7 823 aa12.97□□□□□ -0.33
ERGIC3-219ENST00000496172 CD99L2Q8TCZ2 262 aa12.97□□□□□ -0.33
ERGIC3-219ENST00000496172 TEKT1Q969V4 418 aa12.97□□□□□ -0.33
ERGIC3-219ENST00000496172 PCDHAC2Q9Y5I4 1007 aa12.97□□□□□ -0.33
ERGIC3-219ENST00000496172 SEMA3EO15041 775 aa12.96□□□□□ -0.33
ERGIC3-219ENST00000496172 PPP1R12BO60237 982 aaPredicted RBP12.96□□□□□ -0.33
ERGIC3-219ENST00000496172 CRHR2Q13324 411 aa12.96□□□□□ -0.33
ERGIC3-219ENST00000496172 SPDYE2Q495Y8 402 aa12.96□□□□□ -0.33
ERGIC3-219ENST00000496172 OTUD7BQ6GQQ9 843 aa12.96□□□□□ -0.33
ERGIC3-219ENST00000496172 WNK4Q96J92 1243 aa12.96□□□□□ -0.33
ERGIC3-219ENST00000496172 MRIQ9BWK5 157 aa12.96□□□□□ -0.33
ERGIC3-219ENST00000496172 PRO3102Q9H379 93 aa12.96□□□□□ -0.33
ERGIC3-219ENST00000496172 ZNF70Q9UC06 446 aaPredicted RBP12.96□□□□□ -0.33
ERGIC3-219ENST00000496172 DENND2AQ9ULE3 1009 aa12.96□□□□□ -0.33
ERGIC3-219ENST00000496172 ANGEL1Q9UNK9 670 aaKnown RBP12.96□□□□□ -0.33
ERGIC3-219ENST00000496172 OTOFQ9HC10 1997 aa12.96□□□□□ -0.34
ERGIC3-219ENST00000496172 TESPA1A2RU30 521 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms