RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 RFX7Q2KHR2 1363 aa26.34■■□□□ 1.81
ECHDC3-205ENST00000496136 IGSF3O75054 1194 aa26.33■■□□□ 1.81
ECHDC3-205ENST00000496136 RSBN1LQ6PCB5 846 aaPredicted RBP26.33■■□□□ 1.81
ECHDC3-205ENST00000496136 HIP1O00291 1037 aa26.33■■□□□ 1.8
ECHDC3-205ENST00000496136 TCRBV5S4A2TA0A5A2 114 aa26.32■■□□□ 1.8
ECHDC3-205ENST00000496136 UBE3CQ15386 1083 aa26.32■■□□□ 1.8
ECHDC3-205ENST00000496136 DIAPH3Q9NSV4 1193 aa26.32■■□□□ 1.8
ECHDC3-205ENST00000496136 ZBTB12Q9Y330 459 aaPredicted RBP26.32■■□□□ 1.8
ECHDC3-205ENST00000496136 ZNF532Q9HCE3 1301 aa26.31■■□□□ 1.8
ECHDC3-205ENST00000496136 F8W031 263 aaPredicted RBP26.31■■□□□ 1.8
ECHDC3-205ENST00000496136 CWC27Q6UX04 472 aaKnown RBP26.31■■□□□ 1.8
ECHDC3-205ENST00000496136 DZIP1Q86YF9 867 aaKnown RBP26.31■■□□□ 1.8
ECHDC3-205ENST00000496136 KIAA0825Q8IV33 1275 aa26.31■■□□□ 1.8
ECHDC3-205ENST00000496136 FAM227BQ96M60 508 aa26.31■■□□□ 1.8
ECHDC3-205ENST00000496136 GMLQ99445 158 aa26.31■■□□□ 1.8
ECHDC3-205ENST00000496136 MYO3BQ8WXR4 1341 aa26.31■■□□□ 1.8
ECHDC3-205ENST00000496136 ZNF541Q9H0D2 1346 aa26.31■■□□□ 1.8
ECHDC3-205ENST00000496136 DCAF8L1A6NGE4 600 aa26.3■■□□□ 1.8
ECHDC3-205ENST00000496136 NAA16Q6N069 864 aaPredicted RBP26.3■■□□□ 1.8
ECHDC3-205ENST00000496136 TTF2Q9UNY4 1162 aaKnown RBP26.3■■□□□ 1.8
ECHDC3-205ENST00000496136 NMIQ13287 307 aaPredicted RBP26.3■■□□□ 1.8
ECHDC3-205ENST00000496136 C8orf34Q49A92 452 aa26.3■■□□□ 1.8
ECHDC3-205ENST00000496136 ZMYM1Q5SVZ6 1142 aa26.3■■□□□ 1.8
ECHDC3-205ENST00000496136 AGBL3Q8NEM8 1001 aa26.3■■□□□ 1.8
ECHDC3-205ENST00000496136 CYP7A1P22680 504 aa26.29■■□□□ 1.8
ECHDC3-205ENST00000496136 TMED8Q6PL24 325 aaPredicted RBP26.29■■□□□ 1.8
ECHDC3-205ENST00000496136 CASC1Q6TDU7 716 aa26.29■■□□□ 1.8
ECHDC3-205ENST00000496136 A0A0D9SFI3 127 aa26.28■■□□□ 1.8
ECHDC3-205ENST00000496136 DIXDC1Q155Q3 683 aa26.28■■□□□ 1.8
ECHDC3-205ENST00000496136 ADGRA1Q86SQ6 560 aa26.28■■□□□ 1.8
ECHDC3-205ENST00000496136 APPBP2Q92624 585 aa26.28■■□□□ 1.8
ECHDC3-205ENST00000496136 OSBP2Q969R2 916 aa26.28■■□□□ 1.8
ECHDC3-205ENST00000496136 SEC62Q99442 399 aaKnown RBP26.28■■□□□ 1.8
ECHDC3-205ENST00000496136 GJA3Q9Y6H8 435 aa26.28■■□□□ 1.8
ECHDC3-205ENST00000496136 PUS7LQ9H0K6 701 aaKnown RBP26.28■■□□□ 1.8
ECHDC3-205ENST00000496136 MYH2Q9UKX2 1941 aa26.27■■□□□ 1.8
ECHDC3-205ENST00000496136 SCNN1DP51172 638 aa26.27■■□□□ 1.8
ECHDC3-205ENST00000496136 GSTO1P78417 241 aa26.27■■□□□ 1.8
ECHDC3-205ENST00000496136 MRIQ9BWK5 157 aa26.27■■□□□ 1.8
ECHDC3-205ENST00000496136 HELLSQ9NRZ9 838 aa26.27■■□□□ 1.8
ECHDC3-205ENST00000496136 TIAM2Q8IVF5 1701 aa26.26■■□□□ 1.8
ECHDC3-205ENST00000496136 GPC2Q8N158 579 aa26.26■■□□□ 1.79
ECHDC3-205ENST00000496136 RUFY2Q8WXA3 655 aa26.26■■□□□ 1.79
ECHDC3-205ENST00000496136 FAM163AQ96GL9 167 aaPredicted RBP26.26■■□□□ 1.79
ECHDC3-205ENST00000496136 IL25Q9H293 177 aa26.26■■□□□ 1.79
ECHDC3-205ENST00000496136 MAST3O60307 1309 aa26.26■■□□□ 1.79
ECHDC3-205ENST00000496136 LDHCP07864 332 aa26.25■■□□□ 1.79
ECHDC3-205ENST00000496136 MCMDC2Q4G0Z9 681 aa26.25■■□□□ 1.79
ECHDC3-205ENST00000496136 RPS12P25398 132 aaKnown RBP26.25■■□□□ 1.79
ECHDC3-205ENST00000496136 SLF2Q8IX21 1173 aa26.25■■□□□ 1.79
ECHDC3-205ENST00000496136 ESYT1Q9BSJ8 1104 aa26.25■■□□□ 1.79
ECHDC3-205ENST00000496136 SGSM2O43147 1006 aa26.24■■□□□ 1.79
ECHDC3-205ENST00000496136 USP17L8P0C7I0 530 aa26.24■■□□□ 1.79
ECHDC3-205ENST00000496136 HDLBPQ00341 1268 aaKnown RBP26.24■■□□□ 1.79
ECHDC3-205ENST00000496136 DPF2Q92785 391 aa26.24■■□□□ 1.79
ECHDC3-205ENST00000496136 MAST2Q6P0Q8 1798 aa26.24■■□□□ 1.79
ECHDC3-205ENST00000496136 M0R2C6 588 aa26.23■■□□□ 1.79
ECHDC3-205ENST00000496136 GMPSP49915 693 aaPredicted RBP26.23■■□□□ 1.79
ECHDC3-205ENST00000496136 HHIPL2Q6UWX4 724 aa26.23■■□□□ 1.79
ECHDC3-205ENST00000496136 OGFOD1Q8N543 542 aa26.23■■□□□ 1.79
ECHDC3-205ENST00000496136 ZC3H4Q9UPT8 1303 aaKnown RBP26.23■■□□□ 1.79
ECHDC3-205ENST00000496136 DDNO94850 711 aaPredicted RBP26.23■■□□□ 1.79
ECHDC3-205ENST00000496136 MIGA1Q8NAN2 632 aa26.23■■□□□ 1.79
ECHDC3-205ENST00000496136 TEKT1Q969V4 418 aa26.23■■□□□ 1.79
ECHDC3-205ENST00000496136 SERPINA10Q9UK55 444 aa26.23■■□□□ 1.79
ECHDC3-205ENST00000496136 MROH7-TTC4A0A0A0MT08 1334 aa26.22■■□□□ 1.79
ECHDC3-205ENST00000496136 CRKP46108 304 aa26.22■■□□□ 1.79
ECHDC3-205ENST00000496136 DPY19L2Q6NUT2 758 aa26.22■■□□□ 1.79
ECHDC3-205ENST00000496136 ZNF589Q86UQ0 364 aaPredicted RBP26.22■■□□□ 1.79
ECHDC3-205ENST00000496136 GAKO14976 1311 aa26.22■■□□□ 1.79
ECHDC3-205ENST00000496136 GPR75-ASB3A0A0A6YYF3 556 aa26.21■■□□□ 1.79
ECHDC3-205ENST00000496136 CCDC129Q6ZRS4 1044 aa26.21■■□□□ 1.79
ECHDC3-205ENST00000496136 HDAC9Q9UKV0 1011 aa26.21■■□□□ 1.79
ECHDC3-205ENST00000496136 DAGLAQ9Y4D2 1042 aa26.21■■□□□ 1.79
ECHDC3-205ENST00000496136 AIDAQ96BJ3 306 aa26.2■■□□□ 1.79
ECHDC3-205ENST00000496136 RIOK1Q9BRS2 568 aaKnown RBP26.2■■□□□ 1.79
ECHDC3-205ENST00000496136 AATFQ9NY61 560 aaKnown RBP eCLIP26.2■■□□□ 1.79
ECHDC3-205ENST00000496136 MAGEB6P1A0A0J9YX57 407 aa26.2■■□□□ 1.78
ECHDC3-205ENST00000496136 SHTN1A0MZ66 631 aa26.2■■□□□ 1.78
ECHDC3-205ENST00000496136 SEC24BO95487 1268 aa26.2■■□□□ 1.78
ECHDC3-205ENST00000496136 ZDHHC15Q96MV8 337 aa26.2■■□□□ 1.78
ECHDC3-205ENST00000496136 BACH2Q9BYV9 841 aa26.2■■□□□ 1.78
ECHDC3-205ENST00000496136 CNOT7Q9UIV1 285 aaKnown RBP26.2■■□□□ 1.78
ECHDC3-205ENST00000496136 RAD50Q92878 1312 aa26.2■■□□□ 1.78
ECHDC3-205ENST00000496136 GPAA1O43292 621 aa26.19■■□□□ 1.78
ECHDC3-205ENST00000496136 MMP14P50281 582 aa26.19■■□□□ 1.78
ECHDC3-205ENST00000496136 PPP4CP60510 307 aa26.19■■□□□ 1.78
ECHDC3-205ENST00000496136 DYNLL1P63167 89 aaKnown RBP26.19■■□□□ 1.78
ECHDC3-205ENST00000496136 STRBPQ96SI9 672 aaKnown RBP26.19■■□□□ 1.78
ECHDC3-205ENST00000496136 PCDHAC2Q9Y5I4 1007 aa26.19■■□□□ 1.78
ECHDC3-205ENST00000496136 MBD4O95243 580 aa26.18■■□□□ 1.78
ECHDC3-205ENST00000496136 BAG3O95817 575 aa26.18■■□□□ 1.78
ECHDC3-205ENST00000496136 BTDP43251 543 aa26.18■■□□□ 1.78
ECHDC3-205ENST00000496136 RBM5P52756 815 aaKnown RBP eCLIP26.18■■□□□ 1.78
ECHDC3-205ENST00000496136 ZNF280AP59817 542 aaPredicted RBP26.18■■□□□ 1.78
ECHDC3-205ENST00000496136 APOBEC3HQ6NTF7 200 aaKnown RBP26.18■■□□□ 1.78
ECHDC3-205ENST00000496136 ARMT1Q9H993 441 aa26.18■■□□□ 1.78
ECHDC3-205ENST00000496136 CCDC171Q6TFL3 1326 aa26.18■■□□□ 1.78
ECHDC3-205ENST00000496136 CFAP100Q494V2 611 aa26.18■■□□□ 1.78
ECHDC3-205ENST00000496136 MICALL2Q8IY33 904 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms