RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 LRIT3Q3SXY7 679 aa12.6□□□□□ -0.39
SMARCAL1-213ENST00000496037 XAGE3Q8WTP9 111 aa12.6□□□□□ -0.39
SMARCAL1-213ENST00000496037 U2AF1L4Q8WU68 220 aaKnown RBP12.6□□□□□ -0.39
SMARCAL1-213ENST00000496037 BRI3BPQ8WY22 251 aa12.6□□□□□ -0.39
SMARCAL1-213ENST00000496037 ELP3Q9H9T3 547 aa12.6□□□□□ -0.39
SMARCAL1-213ENST00000496037 HOXD10P28358 340 aa12.59□□□□□ -0.39
SMARCAL1-213ENST00000496037 BCAMP50895 628 aa12.59□□□□□ -0.39
SMARCAL1-213ENST00000496037 STRIP1Q5VSL9 837 aa12.59□□□□□ -0.39
SMARCAL1-213ENST00000496037 KIAA0825Q8IV33 1275 aa12.59□□□□□ -0.39
SMARCAL1-213ENST00000496037 HS6ST3Q8IZP7 471 aa12.59□□□□□ -0.39
SMARCAL1-213ENST00000496037 MS4A4AQ96JQ5 239 aa12.59□□□□□ -0.39
SMARCAL1-213ENST00000496037 TRIM47Q96LD4 638 aa12.59□□□□□ -0.39
SMARCAL1-213ENST00000496037 GDF15Q99988 308 aa12.59□□□□□ -0.39
SMARCAL1-213ENST00000496037 RIPOR2Q9Y4F9 1068 aa12.59□□□□□ -0.39
SMARCAL1-213ENST00000496037 MUC3AQ02505 3323 aa12.59□□□□□ -0.39
SMARCAL1-213ENST00000496037 MED23Q9ULK4 1368 aa12.58□□□□□ -0.4
SMARCAL1-213ENST00000496037 IRS4O14654 1257 aaPredicted RBP12.58□□□□□ -0.4
SMARCAL1-213ENST00000496037 MYO1BO43795 1136 aa12.58□□□□□ -0.4
SMARCAL1-213ENST00000496037 TLR2O60603 784 aa12.58□□□□□ -0.4
SMARCAL1-213ENST00000496037 NEFMP07197 916 aa12.58□□□□□ -0.4
SMARCAL1-213ENST00000496037 CNGB1Q14028 1251 aaPredicted RBP12.58□□□□□ -0.4
SMARCAL1-213ENST00000496037 DLGAP5Q15398 846 aa12.58□□□□□ -0.4
SMARCAL1-213ENST00000496037 RTL5Q5HYW3 569 aaPredicted RBP12.58□□□□□ -0.4
SMARCAL1-213ENST00000496037 TDHQ8IZJ6 230 aa12.58□□□□□ -0.4
SMARCAL1-213ENST00000496037 FAM43AQ8N2R8 423 aa12.58□□□□□ -0.4
SMARCAL1-213ENST00000496037 SRRDQ9UH36 339 aa12.58□□□□□ -0.4
SMARCAL1-213ENST00000496037 ZNF804BA4D1E1 1349 aa12.58□□□□□ -0.4
SMARCAL1-213ENST00000496037 HSP90B1P14625 803 aaKnown RBP12.57□□□□□ -0.4
SMARCAL1-213ENST00000496037 SEC31BQ9NQW1 1179 aa12.57□□□□□ -0.4
SMARCAL1-213ENST00000496037 ZSWIM8A7E2V4 1837 aa12.57□□□□□ -0.4
SMARCAL1-213ENST00000496037 IRS2Q9Y4H2 1338 aa12.57□□□□□ -0.4
SMARCAL1-213ENST00000496037 PRUNE2Q8WUY3 3088 aa12.56□□□□□ -0.4
SMARCAL1-213ENST00000496037 USP2O75604 605 aaPredicted RBP12.56□□□□□ -0.4
SMARCAL1-213ENST00000496037 PLA2G5P39877 138 aa12.56□□□□□ -0.4
SMARCAL1-213ENST00000496037 PSMC4P43686 418 aa12.56□□□□□ -0.4
SMARCAL1-213ENST00000496037 C7orf61Q8IZ16 206 aa12.56□□□□□ -0.4
SMARCAL1-213ENST00000496037 HELBQ8NG08 1087 aaPredicted RBP12.56□□□□□ -0.4
SMARCAL1-213ENST00000496037 ZBED3Q96IU2 234 aaPredicted RBP12.56□□□□□ -0.4
SMARCAL1-213ENST00000496037 VEZTQ9HBM0 779 aa12.56□□□□□ -0.4
SMARCAL1-213ENST00000496037 MYPNQ86TC9 1320 aa12.56□□□□□ -0.4
SMARCAL1-213ENST00000496037 FMNL1O95466 1100 aaPredicted RBP12.55□□□□□ -0.4
SMARCAL1-213ENST00000496037 SGPL1O95470 568 aa12.55□□□□□ -0.4
SMARCAL1-213ENST00000496037 CAPN2P17655 700 aa12.55□□□□□ -0.4
SMARCAL1-213ENST00000496037 CCDC152Q4G0S7 254 aa12.55□□□□□ -0.4
SMARCAL1-213ENST00000496037 NBPF12Q5TAG4 269 aaPredicted RBP12.55□□□□□ -0.4
SMARCAL1-213ENST00000496037 TTLL5Q6EMB2 1281 aa12.55□□□□□ -0.4
SMARCAL1-213ENST00000496037 ANKRD18AQ8IVF6 992 aa12.55□□□□□ -0.4
SMARCAL1-213ENST00000496037 SYMPKQ92797 1274 aaKnown RBP12.55□□□□□ -0.4
SMARCAL1-213ENST00000496037 FAM122AQ96E09 287 aa12.55□□□□□ -0.4
SMARCAL1-213ENST00000496037 COA1Q9GZY4 146 aa12.55□□□□□ -0.4
SMARCAL1-213ENST00000496037 ZCCHC17Q9NP64 241 aaKnown RBP12.55□□□□□ -0.4
SMARCAL1-213ENST00000496037 TSPYL4Q9UJ04 414 aa12.55□□□□□ -0.4
SMARCAL1-213ENST00000496037 ZMYND8Q9ULU4 1186 aaPredicted RBP12.55□□□□□ -0.4
SMARCAL1-213ENST00000496037 LAMA2P24043 3122 aaKnown RBP12.55□□□□□ -0.4
SMARCAL1-213ENST00000496037 CLRN2A0PK11 232 aa12.54□□□□□ -0.4
SMARCAL1-213ENST00000496037 ATP5J2-PTCD1G3V325 749 aa12.54□□□□□ -0.4
SMARCAL1-213ENST00000496037 TFRCP02786 760 aaKnown RBP12.54□□□□□ -0.4
SMARCAL1-213ENST00000496037 OSBPP22059 807 aa12.54□□□□□ -0.4
SMARCAL1-213ENST00000496037 SLAIN1Q8ND83 568 aa12.54□□□□□ -0.4
SMARCAL1-213ENST00000496037 ISCA1Q9BUE6 129 aa12.54□□□□□ -0.4
SMARCAL1-213ENST00000496037 UBE2OQ9C0C9 1292 aaKnown RBP12.54□□□□□ -0.4
SMARCAL1-213ENST00000496037 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.54□□□□□ -0.4
SMARCAL1-213ENST00000496037 BOLA1Q9Y3E2 137 aa12.54□□□□□ -0.4
SMARCAL1-213ENST00000496037 CSADQ9Y600 493 aa12.54□□□□□ -0.4
SMARCAL1-213ENST00000496037 OTOFQ9HC10 1997 aa12.53□□□□□ -0.4
SMARCAL1-213ENST00000496037 CETPP11597 493 aa12.53□□□□□ -0.4
SMARCAL1-213ENST00000496037 PLBD2Q8NHP8 589 aa12.53□□□□□ -0.4
SMARCAL1-213ENST00000496037 GUCD1Q96NT3 240 aa12.53□□□□□ -0.4
SMARCAL1-213ENST00000496037 UNC93B1Q9H1C4 597 aa12.53□□□□□ -0.4
SMARCAL1-213ENST00000496037 MAGEA10P43363 369 aaPredicted RBP12.52□□□□□ -0.41
SMARCAL1-213ENST00000496037 NECAB2Q7Z6G3 386 aa12.52□□□□□ -0.41
SMARCAL1-213ENST00000496037 CCDC85AQ96PX6 553 aaPredicted RBP12.52□□□□□ -0.41
SMARCAL1-213ENST00000496037 PER1O15534 1290 aaPredicted RBP12.51□□□□□ -0.41
SMARCAL1-213ENST00000496037 GTF2IP78347 998 aa12.51□□□□□ -0.41
SMARCAL1-213ENST00000496037 TNFAIP1Q13829 316 aa12.51□□□□□ -0.41
SMARCAL1-213ENST00000496037 VGLL4Q14135 290 aa12.51□□□□□ -0.41
SMARCAL1-213ENST00000496037 RASA3Q14644 834 aa12.51□□□□□ -0.41
SMARCAL1-213ENST00000496037 FAM109BQ6ICB4 259 aaPredicted RBP12.51□□□□□ -0.41
SMARCAL1-213ENST00000496037 MTMR14Q8NCE2 650 aa12.51□□□□□ -0.41
SMARCAL1-213ENST00000496037 PAWRQ96IZ0 340 aaKnown RBP12.51□□□□□ -0.41
SMARCAL1-213ENST00000496037 FAM161BQ96MY7 647 aa12.51□□□□□ -0.41
SMARCAL1-213ENST00000496037 DEFB118Q96PH6 123 aa12.51□□□□□ -0.41
SMARCAL1-213ENST00000496037 MFRPQ9BY79 579 aa12.51□□□□□ -0.41
SMARCAL1-213ENST00000496037 RAPGEFL1Q9UHV5 662 aa12.51□□□□□ -0.41
SMARCAL1-213ENST00000496037 CPA4Q9UI42 421 aa12.51□□□□□ -0.41
SMARCAL1-213ENST00000496037 FAM205AQ6ZU69 1335 aa12.51□□□□□ -0.41
SMARCAL1-213ENST00000496037 BTBD19C9JJ37 291 aa12.5□□□□□ -0.41
SMARCAL1-213ENST00000496037 SYN1P17600 705 aa12.5□□□□□ -0.41
SMARCAL1-213ENST00000496037 CTGFP29279 349 aa12.5□□□□□ -0.41
SMARCAL1-213ENST00000496037 CCT4P50991 539 aaKnown RBP12.5□□□□□ -0.41
SMARCAL1-213ENST00000496037 PRKCZQ05513 592 aa12.5□□□□□ -0.41
SMARCAL1-213ENST00000496037 CFAP100Q494V2 611 aa12.5□□□□□ -0.41
SMARCAL1-213ENST00000496037 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.5□□□□□ -0.41
SMARCAL1-213ENST00000496037 ZBTB38Q8NAP3 1195 aaPredicted RBP12.5□□□□□ -0.41
SMARCAL1-213ENST00000496037 FBXO22Q8NEZ5 403 aa12.5□□□□□ -0.41
SMARCAL1-213ENST00000496037 MAFAQ8NHW3 353 aaPredicted RBP12.5□□□□□ -0.41
SMARCAL1-213ENST00000496037 CDC5LQ99459 802 aaKnown RBP12.5□□□□□ -0.41
SMARCAL1-213ENST00000496037 ECM29Q5VYK3 1845 aa12.5□□□□□ -0.41
SMARCAL1-213ENST00000496037 ADGRA2Q96PE1 1338 aa12.49□□□□□ -0.41
SMARCAL1-213ENST00000496037 SPDYE5A6NIY4 337 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms