RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 EVC2Q86UK5 1308 aa5.99□□□□□ -1.45
VPS52-222ENST00000495981 PXDNLA1KZ92 1463 aa5.98□□□□□ -1.45
VPS52-222ENST00000495981 KTN1Q86UP2 1357 aaKnown RBP5.98□□□□□ -1.45
VPS52-222ENST00000495981 A6NJY4 79 aa5.98□□□□□ -1.45
VPS52-222ENST00000495981 HSPA8P11142 646 aaKnown RBP5.98□□□□□ -1.45
VPS52-222ENST00000495981 DPEP1P16444 411 aa5.98□□□□□ -1.45
VPS52-222ENST00000495981 KCNA3P22001 575 aa5.98□□□□□ -1.45
VPS52-222ENST00000495981 ADD1P35611 737 aaKnown RBP5.98□□□□□ -1.45
VPS52-222ENST00000495981 MAPK8P45983 427 aa5.98□□□□□ -1.45
VPS52-222ENST00000495981 PLCB3Q01970 1234 aa5.98□□□□□ -1.45
VPS52-222ENST00000495981 ATCAYQ86WG3 371 aa5.98□□□□□ -1.45
VPS52-222ENST00000495981 NT5DC4Q86YG4 428 aa5.98□□□□□ -1.45
VPS52-222ENST00000495981 GJD3Q8N144 294 aa5.98□□□□□ -1.45
VPS52-222ENST00000495981 DDX54Q8TDD1 881 aaKnown RBP5.98□□□□□ -1.45
VPS52-222ENST00000495981 L3MBTL2Q969R5 705 aa5.98□□□□□ -1.45
VPS52-222ENST00000495981 SYTL4Q96C24 671 aaPredicted RBP5.98□□□□□ -1.45
VPS52-222ENST00000495981 MYO19Q96H55 970 aa5.98□□□□□ -1.45
VPS52-222ENST00000495981 HRH3Q9Y5N1 445 aa5.98□□□□□ -1.45
VPS52-222ENST00000495981 CICQ96RK0 1608 aaPredicted RBP5.98□□□□□ -1.45
VPS52-222ENST00000495981 IL2RAP01589 272 aa5.97□□□□□ -1.45
VPS52-222ENST00000495981 IL2RBP14784 551 aa5.97□□□□□ -1.45
VPS52-222ENST00000495981 FSHRP23945 695 aa5.97□□□□□ -1.45
VPS52-222ENST00000495981 SMTNP53814 917 aa5.97□□□□□ -1.45
VPS52-222ENST00000495981 WNT7BP56706 349 aa5.97□□□□□ -1.45
VPS52-222ENST00000495981 SF3A1Q15459 793 aaKnown RBP5.97□□□□□ -1.45
VPS52-222ENST00000495981 ENOX2Q16206 610 aaKnown RBP5.97□□□□□ -1.45
VPS52-222ENST00000495981 SH3PXD2AQ5TCZ1 1133 aa5.97□□□□□ -1.45
VPS52-222ENST00000495981 PLA2G2EQ9NZK7 142 aa5.97□□□□□ -1.45
VPS52-222ENST00000495981 NCAPD2Q15021 1401 aa5.97□□□□□ -1.45
VPS52-222ENST00000495981 KIAA1551Q9HCM1 1747 aa5.96□□□□□ -1.45
VPS52-222ENST00000495981 EML1O00423 815 aa5.96□□□□□ -1.46
VPS52-222ENST00000495981 GNRH1P01148 92 aa5.96□□□□□ -1.46
VPS52-222ENST00000495981 CTCFP49711 727 aaPredicted RBP5.96□□□□□ -1.46
VPS52-222ENST00000495981 VEGFBP49765 207 aa5.96□□□□□ -1.46
VPS52-222ENST00000495981 ALKBH2Q6NS38 261 aa5.96□□□□□ -1.46
VPS52-222ENST00000495981 ETFBKMTQ8IXQ9 262 aa5.96□□□□□ -1.46
VPS52-222ENST00000495981 KDF1Q8NAX2 398 aaPredicted RBP5.96□□□□□ -1.46
VPS52-222ENST00000495981 TMEM87AQ8NBN3 555 aa5.96□□□□□ -1.46
VPS52-222ENST00000495981 ZDHHC1Q8WTX9 485 aa5.96□□□□□ -1.46
VPS52-222ENST00000495981 VTI1AQ96AJ9 217 aa5.96□□□□□ -1.46
VPS52-222ENST00000495981 RAB6BQ9NRW1 208 aa5.96□□□□□ -1.46
VPS52-222ENST00000495981 NLRP2Q9NX02 1062 aa5.96□□□□□ -1.46
VPS52-222ENST00000495981 RNF181Q9P0P0 153 aa5.96□□□□□ -1.46
VPS52-222ENST00000495981 TLL2Q9Y6L7 1015 aa5.96□□□□□ -1.46
VPS52-222ENST00000495981 MAP2P11137 1827 aaKnown RBP5.96□□□□□ -1.46
VPS52-222ENST00000495981 C10orf71Q711Q0 1435 aa5.96□□□□□ -1.46
VPS52-222ENST00000495981 RTL1A6NKG5 1358 aa5.95□□□□□ -1.46
VPS52-222ENST00000495981 RNF223E7ERA6 249 aa5.95□□□□□ -1.46
VPS52-222ENST00000495981 SMARCA5O60264 1052 aaPredicted RBP5.95□□□□□ -1.46
VPS52-222ENST00000495981 SORBS3O60504 671 aa5.95□□□□□ -1.46
VPS52-222ENST00000495981 HIRAP54198 1017 aaPredicted RBP5.95□□□□□ -1.46
VPS52-222ENST00000495981 PSMA6P60900 246 aaKnown RBP5.95□□□□□ -1.46
VPS52-222ENST00000495981 UBR3Q6ZT12 1888 aa5.95□□□□□ -1.46
VPS52-222ENST00000495981 CYP2U1Q7Z449 544 aa5.95□□□□□ -1.46
VPS52-222ENST00000495981 NME9Q86XW9 330 aa5.95□□□□□ -1.46
VPS52-222ENST00000495981 KCNH5Q8NCM2 988 aa5.95□□□□□ -1.46
VPS52-222ENST00000495981 TMC1Q8TDI8 760 aa5.95□□□□□ -1.46
VPS52-222ENST00000495981 XAGE2Q96GT9 111 aa5.95□□□□□ -1.46
VPS52-222ENST00000495981 SPATA32Q96LK8 384 aa5.95□□□□□ -1.46
VPS52-222ENST00000495981 NIF3L1Q9GZT8 377 aa5.95□□□□□ -1.46
VPS52-222ENST00000495981 METTL5Q9NRN9 209 aaKnown RBP5.95□□□□□ -1.46
VPS52-222ENST00000495981 POLIQ9UNA4 740 aa5.95□□□□□ -1.46
VPS52-222ENST00000495981 ITGB4P16144 1822 aa5.95□□□□□ -1.46
VPS52-222ENST00000495981 C4BP0C0L5 1744 aa5.94□□□□□ -1.46
VPS52-222ENST00000495981 PNMA6FA0A0J9YX94 578 aa5.94□□□□□ -1.46
VPS52-222ENST00000495981 CDK2AP1O14519 115 aa5.94□□□□□ -1.46
VPS52-222ENST00000495981 SIAH2O43255 324 aa5.94□□□□□ -1.46
VPS52-222ENST00000495981 ITGBL1O95965 494 aaPredicted RBP5.94□□□□□ -1.46
VPS52-222ENST00000495981 NR3C2P08235 984 aa5.94□□□□□ -1.46
VPS52-222ENST00000495981 MMP10P09238 476 aa5.94□□□□□ -1.46
VPS52-222ENST00000495981 CTSHP09668 335 aa5.94□□□□□ -1.46
VPS52-222ENST00000495981 RASSF7Q02833 373 aa5.94□□□□□ -1.46
VPS52-222ENST00000495981 KCNC4Q03721 635 aa5.94□□□□□ -1.46
VPS52-222ENST00000495981 PSMD2Q13200 908 aa5.94□□□□□ -1.46
VPS52-222ENST00000495981 PPP1R26Q5T8A7 1209 aaPredicted RBP5.94□□□□□ -1.46
VPS52-222ENST00000495981 MPNDQ8N594 471 aa5.94□□□□□ -1.46
VPS52-222ENST00000495981 SIN3AQ96ST3 1273 aa5.94□□□□□ -1.46
VPS52-222ENST00000495981 TGIF2Q9GZN2 237 aa5.94□□□□□ -1.46
VPS52-222ENST00000495981 ARHGEF10LQ9HCE6 1279 aa5.94□□□□□ -1.46
VPS52-222ENST00000495981 EMILIN1Q9Y6C2 1016 aa5.94□□□□□ -1.46
VPS52-222ENST00000495981 KDM2BQ8NHM5 1336 aa5.94□□□□□ -1.46
VPS52-222ENST00000495981 C4AP0C0L4 1744 aa5.94□□□□□ -1.46
VPS52-222ENST00000495981 CNTNAP1P78357 1384 aa5.93□□□□□ -1.46
VPS52-222ENST00000495981 ANKRD36BQ8N2N9 1353 aa5.93□□□□□ -1.46
VPS52-222ENST00000495981 SZT2Q5T011 3432 aa5.93□□□□□ -1.46
VPS52-222ENST00000495981 PDGFAP04085 211 aa5.93□□□□□ -1.46
VPS52-222ENST00000495981 DHX9Q08211 1270 aaKnown RBP5.93□□□□□ -1.46
VPS52-222ENST00000495981 ARID5BQ14865 1188 aa5.93□□□□□ -1.46
VPS52-222ENST00000495981 GIMAP6Q6P9H5 292 aa5.93□□□□□ -1.46
VPS52-222ENST00000495981 ANKRD24Q8TF21 1146 aa5.93□□□□□ -1.46
VPS52-222ENST00000495981 RNF34Q969K3 372 aa5.93□□□□□ -1.46
VPS52-222ENST00000495981 DCAF5Q96JK2 942 aa5.93□□□□□ -1.46
VPS52-222ENST00000495981 BCL11AQ9H165 835 aa5.93□□□□□ -1.46
VPS52-222ENST00000495981 ACBD3Q9H3P7 528 aa5.93□□□□□ -1.46
VPS52-222ENST00000495981 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.93□□□□□ -1.467e-6■■■■■ 74.5
VPS52-222ENST00000495981 VTI1BQ9UEU0 232 aa5.93□□□□□ -1.46
VPS52-222ENST00000495981 ZNF831Q5JPB2 1677 aa5.93□□□□□ -1.46
VPS52-222ENST00000495981 COL5A3P25940 1745 aaPredicted RBP5.93□□□□□ -1.46
VPS52-222ENST00000495981 KIF13BQ9NQT8 1826 aa5.92□□□□□ -1.46
VPS52-222ENST00000495981 ADH1CP00326 375 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms