RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 SRGAP3O43295 1099 aa30.11■■■□□ 2.41
HLA-C-209ENST00000495835 MAP3K11Q16584 847 aa30.11■■■□□ 2.41
HLA-C-209ENST00000495835 SPDYE2Q495Y8 402 aa30.11■■■□□ 2.41
HLA-C-209ENST00000495835 MOB2Q70IA6 237 aa30.11■■■□□ 2.41
HLA-C-209ENST00000495835 GNL3LQ9NVN8 582 aaKnown RBP30.11■■■□□ 2.41
HLA-C-209ENST00000495835 AKAP11Q9UKA4 1901 aa30.11■■■□□ 2.41
HLA-C-209ENST00000495835 MYH13Q9UKX3 1938 aa30.11■■■□□ 2.41
HLA-C-209ENST00000495835 CLRN2A0PK11 232 aa30.1■■■□□ 2.41
HLA-C-209ENST00000495835 PPP1R12BO60237 982 aaPredicted RBP30.1■■■□□ 2.41
HLA-C-209ENST00000495835 LDLRAD1Q5T700 205 aa30.1■■■□□ 2.41
HLA-C-209ENST00000495835 CSRNP1Q96S65 589 aa30.1■■■□□ 2.41
HLA-C-209ENST00000495835 VEZTQ9HBM0 779 aa30.1■■■□□ 2.41
HLA-C-209ENST00000495835 ZNF70Q9UC06 446 aaPredicted RBP30.1■■■□□ 2.41
HLA-C-209ENST00000495835 PA2G4Q9UQ80 394 aaKnown RBP30.1■■■□□ 2.41
HLA-C-209ENST00000495835 TEKT1Q969V4 418 aa30.09■■■□□ 2.41
HLA-C-209ENST00000495835 CLUAP1Q96AJ1 413 aa30.09■■■□□ 2.41
HLA-C-209ENST00000495835 SEMA3EO15041 775 aa30.08■■■□□ 2.41
HLA-C-209ENST00000495835 RASA3Q14644 834 aa30.07■■■□□ 2.4
HLA-C-209ENST00000495835 TDRD3Q9H7E2 651 aaKnown RBP30.07■■■□□ 2.4
HLA-C-209ENST00000495835 TNNQ9UQP3 1299 aa30.07■■■□□ 2.4
HLA-C-209ENST00000495835 AKAP2Q9Y2D5 859 aa30.07■■■□□ 2.4
HLA-C-209ENST00000495835 TNNI2P48788 182 aa30.06■■■□□ 2.4
HLA-C-209ENST00000495835 GRIK5Q16478 980 aa30.06■■■□□ 2.4
HLA-C-209ENST00000495835 HHIPL2Q6UWX4 724 aa30.06■■■□□ 2.4
HLA-C-209ENST00000495835 TMEM57Q8N5G2 664 aa30.06■■■□□ 2.4
HLA-C-209ENST00000495835 ZDHHC15Q96MV8 337 aa30.06■■■□□ 2.4
HLA-C-209ENST00000495835 ANGEL1Q9UNK9 670 aaKnown RBP30.06■■■□□ 2.4
HLA-C-209ENST00000495835 AOX1Q06278 1338 aa30.05■■■□□ 2.4
HLA-C-209ENST00000495835 DENND2AQ9ULE3 1009 aa30.05■■■□□ 2.4
HLA-C-209ENST00000495835 RNF186Q9NXI6 227 aa30.04■■■□□ 2.4
HLA-C-209ENST00000495835 TSKSQ9UJT2 592 aa30.04■■■□□ 2.4
HLA-C-209ENST00000495835 SALL1Q9NSC2 1324 aa30.03■■■□□ 2.4
HLA-C-209ENST00000495835 FKBP1CQ5VVH2 108 aa30.03■■■□□ 2.4
HLA-C-209ENST00000495835 FTSJ3Q8IY81 847 aaKnown RBP30.03■■■□□ 2.4
HLA-C-209ENST00000495835 TM4SF4P48230 202 aa30.02■■■□□ 2.4
HLA-C-209ENST00000495835 PRKG1Q13976 671 aa30.02■■■□□ 2.4
HLA-C-209ENST00000495835 NBPF12Q5TAG4 269 aaPredicted RBP30.02■■■□□ 2.4
HLA-C-209ENST00000495835 SSC5DA1L4H1 1573 aa30.02■■■□□ 2.4
HLA-C-209ENST00000495835 IREB2P48200 963 aaKnown RBP30.01■■■□□ 2.39
HLA-C-209ENST00000495835 PDS5AQ29RF7 1337 aaKnown RBP30■■■□□ 2.39
HLA-C-209ENST00000495835 TRPA1O75762 1119 aa30■■■□□ 2.39
HLA-C-209ENST00000495835 CCDC102BQ68D86 513 aa30■■■□□ 2.39
HLA-C-209ENST00000495835 ZGPATQ8N5A5 531 aaKnown RBP30■■■□□ 2.39
HLA-C-209ENST00000495835 SLC10A4Q96EP9 437 aa30■■■□□ 2.39
HLA-C-209ENST00000495835 TMOD2Q9NZR1 351 aa30■■■□□ 2.39
HLA-C-209ENST00000495835 PHKA1P46020 1223 aa29.99■■■□□ 2.39
HLA-C-209ENST00000495835 SREBF2Q12772 1141 aa29.99■■■□□ 2.39
HLA-C-209ENST00000495835 APOBEC3HQ6NTF7 200 aaKnown RBP29.99■■■□□ 2.39
HLA-C-209ENST00000495835 FAM83AQ86UY5 434 aa29.99■■■□□ 2.39
HLA-C-209ENST00000495835 TEPSINQ96N21 525 aa29.99■■■□□ 2.39
HLA-C-209ENST00000495835 CASP8AP2Q9UKL3 1982 aa29.99■■■□□ 2.39
HLA-C-209ENST00000495835 A0A1B0GUL7 405 aa29.98■■■□□ 2.39
HLA-C-209ENST00000495835 USP2O75604 605 aaPredicted RBP29.98■■■□□ 2.39
HLA-C-209ENST00000495835 ZBTB48P10074 688 aaPredicted RBP29.98■■■□□ 2.39
HLA-C-209ENST00000495835 INHBEP58166 350 aa29.98■■■□□ 2.39
HLA-C-209ENST00000495835 TIMM10P62072 90 aa29.98■■■□□ 2.39
HLA-C-209ENST00000495835 TFCP2Q12800 502 aa29.98■■■□□ 2.39
HLA-C-209ENST00000495835 G3BP1Q13283 466 aaKnown RBP eCLIP29.98■■■□□ 2.39
HLA-C-209ENST00000495835 MVPQ14764 893 aaKnown RBP29.98■■■□□ 2.39
HLA-C-209ENST00000495835 SPRYD7Q5W111 196 aa29.98■■■□□ 2.39
HLA-C-209ENST00000495835 PNMA6EA0A0J9YXQ4 647 aa29.97■■■□□ 2.39
HLA-C-209ENST00000495835 TCP10L2B9ZVM9 353 aa29.97■■■□□ 2.39
HLA-C-209ENST00000495835 ANKRD13AQ8IZ07 590 aa29.97■■■□□ 2.39
HLA-C-209ENST00000495835 ZBTB7BO15156 539 aaPredicted RBP29.96■■■□□ 2.39
HLA-C-209ENST00000495835 LDHBP07195 334 aaKnown RBP29.96■■■□□ 2.39
HLA-C-209ENST00000495835 ATP8B2P98198 1209 aa29.96■■■□□ 2.39
HLA-C-209ENST00000495835 HOOK2Q96ED9 719 aa29.96■■■□□ 2.39
HLA-C-209ENST00000495835 XAGE2Q96GT9 111 aa29.96■■■□□ 2.39
HLA-C-209ENST00000495835 MS4A1P11836 297 aa29.95■■■□□ 2.39
HLA-C-209ENST00000495835 ADORA1P30542 326 aa29.95■■■□□ 2.39
HLA-C-209ENST00000495835 POLA2Q14181 598 aa29.95■■■□□ 2.39
HLA-C-209ENST00000495835 SSH3Q8TE77 659 aa29.95■■■□□ 2.39
HLA-C-209ENST00000495835 LAMB1P07942 1786 aa29.95■■■□□ 2.38
HLA-C-209ENST00000495835 TMEM39BQ9GZU3 492 aa29.94■■■□□ 2.38
HLA-C-209ENST00000495835 FZD1Q9UP38 647 aa29.94■■■□□ 2.38
HLA-C-209ENST00000495835 MANSC4A6NHS7 340 aaPredicted RBP29.93■■■□□ 2.38
HLA-C-209ENST00000495835 PRDX5P30044 214 aa29.93■■■□□ 2.38
HLA-C-209ENST00000495835 ITPRIPQ8IWB1 547 aa29.93■■■□□ 2.38
HLA-C-209ENST00000495835 CAPN15O75808 1086 aa29.92■■■□□ 2.38
HLA-C-209ENST00000495835 NOM1Q5C9Z4 860 aaKnown RBP29.92■■■□□ 2.38
HLA-C-209ENST00000495835 SPTY2D1Q68D10 685 aaPredicted RBP29.92■■■□□ 2.38
HLA-C-209ENST00000495835 CFHR5Q9BXR6 569 aa29.92■■■□□ 2.38
HLA-C-209ENST00000495835 GPR108Q9NPR9 543 aa29.92■■■□□ 2.38
HLA-C-209ENST00000495835 RPAP1Q9BWH6 1393 aaPredicted RBP29.91■■■□□ 2.38
HLA-C-209ENST00000495835 ALDH1A1P00352 501 aa29.91■■■□□ 2.38
HLA-C-209ENST00000495835 RLBP1P12271 317 aa29.91■■■□□ 2.38
HLA-C-209ENST00000495835 RASGRF1Q13972 1273 aa29.91■■■□□ 2.38
HLA-C-209ENST00000495835 SLF2Q8IX21 1173 aa29.91■■■□□ 2.38
HLA-C-209ENST00000495835 WNK4Q96J92 1243 aa29.91■■■□□ 2.38
HLA-C-209ENST00000495835 NEUROD6Q96NK8 337 aa29.91■■■□□ 2.38
HLA-C-209ENST00000495835 DAGLAQ9Y4D2 1042 aa29.91■■■□□ 2.38
HLA-C-209ENST00000495835 ABHD8Q96I13 439 aa29.9■■■□□ 2.38
HLA-C-209ENST00000495835 CLMNQ96JQ2 1002 aa29.9■■■□□ 2.38
HLA-C-209ENST00000495835 MKRN3Q13064 507 aaKnown RBP29.89■■■□□ 2.38
HLA-C-209ENST00000495835 GORABQ5T7V8 394 aa29.89■■■□□ 2.38
HLA-C-209ENST00000495835 CACNB3P54284 484 aa29.88■■■□□ 2.37
HLA-C-209ENST00000495835 DIXDC1Q155Q3 683 aa29.88■■■□□ 2.37
HLA-C-209ENST00000495835 FAM151AQ8WW52 585 aa29.88■■■□□ 2.37
HLA-C-209ENST00000495835 FAM163AQ96GL9 167 aaPredicted RBP29.88■■■□□ 2.37
HLA-C-209ENST00000495835 NOP58Q9Y2X3 529 aaKnown RBP29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms