RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 SPDYE2Q495Y8 402 aa8.99□□□□□ -0.97
VPS52-221ENST00000495755 ARMC9Q7Z3E5 817 aa8.99□□□□□ -0.97
VPS52-221ENST00000495755 TDRD3Q9H7E2 651 aaKnown RBP8.99□□□□□ -0.97
VPS52-221ENST00000495755 VEZTQ9HBM0 779 aa8.99□□□□□ -0.97
VPS52-221ENST00000495755 CEP126Q9P2H0 1117 aa8.99□□□□□ -0.97
VPS52-221ENST00000495755 PA2G4Q9UQ80 394 aaKnown RBP8.99□□□□□ -0.97
VPS52-221ENST00000495755 SUGT1Q9Y2Z0 365 aa8.99□□□□□ -0.97
VPS52-221ENST00000495755 SSC5DA1L4H1 1573 aa8.99□□□□□ -0.97
VPS52-221ENST00000495755 UNCXA6NJT0 531 aa8.98□□□□□ -0.97
VPS52-221ENST00000495755 ZBTB22O15209 634 aa8.98□□□□□ -0.97
VPS52-221ENST00000495755 SRGAP3O43295 1099 aa8.98□□□□□ -0.97
VPS52-221ENST00000495755 TRPA1O75762 1119 aa8.98□□□□□ -0.97
VPS52-221ENST00000495755 TM4SF4P48230 202 aa8.98□□□□□ -0.97
VPS52-221ENST00000495755 PRKG1Q13976 671 aa8.98□□□□□ -0.97
VPS52-221ENST00000495755 NBPF12Q5TAG4 269 aaPredicted RBP8.98□□□□□ -0.97
VPS52-221ENST00000495755 ZKSCAN2Q63HK3 967 aa8.98□□□□□ -0.97
VPS52-221ENST00000495755 CLUAP1Q96AJ1 413 aa8.98□□□□□ -0.97
VPS52-221ENST00000495755 ZDHHC15Q96MV8 337 aa8.98□□□□□ -0.97
VPS52-221ENST00000495755 TEPSINQ96N21 525 aa8.98□□□□□ -0.97
VPS52-221ENST00000495755 ANGEL1Q9UNK9 670 aaKnown RBP8.98□□□□□ -0.97
VPS52-221ENST00000495755 FZD1Q9UP38 647 aa8.98□□□□□ -0.97
VPS52-221ENST00000495755 ECM29Q5VYK3 1845 aa8.97□□□□□ -0.97
VPS52-221ENST00000495755 PPP1R12BO60237 982 aaPredicted RBP8.97□□□□□ -0.97
VPS52-221ENST00000495755 USP2O75604 605 aaPredicted RBP8.97□□□□□ -0.97
VPS52-221ENST00000495755 GNAI2P04899 355 aa8.97□□□□□ -0.97
VPS52-221ENST00000495755 TNFAIP1Q13829 316 aa8.97□□□□□ -0.97
VPS52-221ENST00000495755 SPRYD7Q5W111 196 aa8.97□□□□□ -0.97
VPS52-221ENST00000495755 APOBEC3HQ6NTF7 200 aaKnown RBP8.97□□□□□ -0.97
VPS52-221ENST00000495755 HHIPL2Q6UWX4 724 aa8.97□□□□□ -0.97
VPS52-221ENST00000495755 TMEM57Q8N5G2 664 aa8.97□□□□□ -0.97
VPS52-221ENST00000495755 WDR66Q8TBY9 1149 aa8.97□□□□□ -0.97
VPS52-221ENST00000495755 TEKT1Q969V4 418 aa8.97□□□□□ -0.97
VPS52-221ENST00000495755 GNL3LQ9NVN8 582 aaKnown RBP8.97□□□□□ -0.97
VPS52-221ENST00000495755 ZBED9Q6R2W3 1325 aa8.97□□□□□ -0.97
VPS52-221ENST00000495755 ARAP2Q8WZ64 1704 aa8.97□□□□□ -0.97
VPS52-221ENST00000495755 TCP10L2B9ZVM9 353 aa8.96□□□□□ -0.98
VPS52-221ENST00000495755 SEMA3EO15041 775 aa8.96□□□□□ -0.98
VPS52-221ENST00000495755 ADORA1P30542 326 aa8.96□□□□□ -0.98
VPS52-221ENST00000495755 PHKA1P46020 1223 aa8.96□□□□□ -0.98
VPS52-221ENST00000495755 TIMM10P62072 90 aa8.96□□□□□ -0.98
VPS52-221ENST00000495755 TFCP2Q12800 502 aa8.96□□□□□ -0.98
VPS52-221ENST00000495755 MKRN3Q13064 507 aaKnown RBP8.96□□□□□ -0.98
VPS52-221ENST00000495755 FKBP1CQ5VVH2 108 aa8.96□□□□□ -0.98
VPS52-221ENST00000495755 CDAN1Q8IWY9 1227 aa8.96□□□□□ -0.98
VPS52-221ENST00000495755 SLC10A4Q96EP9 437 aa8.96□□□□□ -0.98
VPS52-221ENST00000495755 ABHD8Q96I13 439 aa8.96□□□□□ -0.98
VPS52-221ENST00000495755 CLMNQ96JQ2 1002 aa8.96□□□□□ -0.98
VPS52-221ENST00000495755 TMEM39BQ9GZU3 492 aa8.96□□□□□ -0.98
VPS52-221ENST00000495755 MAST3O60307 1309 aa8.96□□□□□ -0.98
VPS52-221ENST00000495755 PNMA6EA0A0J9YXQ4 647 aa8.95□□□□□ -0.98
VPS52-221ENST00000495755 IREB2P48200 963 aaKnown RBP8.95□□□□□ -0.98
VPS52-221ENST00000495755 TNNI2P48788 182 aa8.95□□□□□ -0.98
VPS52-221ENST00000495755 CCDC102BQ68D86 513 aa8.95□□□□□ -0.98
VPS52-221ENST00000495755 FAM83AQ86UY5 434 aa8.95□□□□□ -0.98
VPS52-221ENST00000495755 DENND2AQ9ULE3 1009 aa8.95□□□□□ -0.98
VPS52-221ENST00000495755 AKAP2Q9Y2D5 859 aa8.95□□□□□ -0.98
VPS52-221ENST00000495755 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.95□□□□□ -0.98
VPS52-221ENST00000495755 SALL1Q9NSC2 1324 aa8.95□□□□□ -0.98
VPS52-221ENST00000495755 CASP8AP2Q9UKL3 1982 aa8.94□□□□□ -0.98
VPS52-221ENST00000495755 A0A1B0GUL7 405 aa8.94□□□□□ -0.98
VPS52-221ENST00000495755 ZBTB7BO15156 539 aaPredicted RBP8.94□□□□□ -0.98
VPS52-221ENST00000495755 ZBTB48P10074 688 aaPredicted RBP8.94□□□□□ -0.98
VPS52-221ENST00000495755 RLBP1P12271 317 aa8.94□□□□□ -0.98
VPS52-221ENST00000495755 PRDX5P30044 214 aa8.94□□□□□ -0.98
VPS52-221ENST00000495755 CACNB3P54284 484 aa8.94□□□□□ -0.98
VPS52-221ENST00000495755 INHBEP58166 350 aa8.94□□□□□ -0.98
VPS52-221ENST00000495755 SREBF2Q12772 1141 aa8.94□□□□□ -0.98
VPS52-221ENST00000495755 POLA2Q14181 598 aa8.94□□□□□ -0.98
VPS52-221ENST00000495755 ANKRD13AQ8IZ07 590 aa8.94□□□□□ -0.98
VPS52-221ENST00000495755 XAGE2Q96GT9 111 aa8.94□□□□□ -0.98
VPS52-221ENST00000495755 WNK4Q96J92 1243 aa8.94□□□□□ -0.98
VPS52-221ENST00000495755 CFHR5Q9BXR6 569 aa8.94□□□□□ -0.98
VPS52-221ENST00000495755 MCOLN1Q9GZU1 580 aa8.94□□□□□ -0.98
VPS52-221ENST00000495755 DAGLAQ9Y4D2 1042 aa8.94□□□□□ -0.98
VPS52-221ENST00000495755 PDS5AQ29RF7 1337 aaKnown RBP8.94□□□□□ -0.98
VPS52-221ENST00000495755 AKAP11Q9UKA4 1901 aa8.93□□□□□ -0.98
VPS52-221ENST00000495755 MANSC4A6NHS7 340 aaPredicted RBP8.93□□□□□ -0.98
VPS52-221ENST00000495755 TBC1D8O95759 1140 aa8.93□□□□□ -0.98
VPS52-221ENST00000495755 LDHBP07195 334 aaKnown RBP8.93□□□□□ -0.98
VPS52-221ENST00000495755 GJA5P36382 358 aa8.93□□□□□ -0.98
VPS52-221ENST00000495755 MAP3K9P80192 1104 aa8.93□□□□□ -0.98
VPS52-221ENST00000495755 ATP8B2P98198 1209 aa8.93□□□□□ -0.98
VPS52-221ENST00000495755 G3BP1Q13283 466 aaKnown RBP eCLIP8.93□□□□□ -0.98
VPS52-221ENST00000495755 DGKZQ13574 1117 aa8.93□□□□□ -0.98
VPS52-221ENST00000495755 RASGRF1Q13972 1273 aa8.93□□□□□ -0.98
VPS52-221ENST00000495755 MVPQ14764 893 aaKnown RBP8.93□□□□□ -0.98
VPS52-221ENST00000495755 DIXDC1Q155Q3 683 aa8.93□□□□□ -0.98
VPS52-221ENST00000495755 NOM1Q5C9Z4 860 aaKnown RBP8.93□□□□□ -0.98
VPS52-221ENST00000495755 CDC42EP5Q6NZY7 148 aa8.93□□□□□ -0.98
VPS52-221ENST00000495755 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.93□□□□□ -0.98
VPS52-221ENST00000495755 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.93□□□□□ -0.98
VPS52-221ENST00000495755 SSH3Q8TE77 659 aa8.93□□□□□ -0.98
VPS52-221ENST00000495755 TMOD2Q9NZR1 351 aa8.93□□□□□ -0.98
VPS52-221ENST00000495755 HTTP42858 3142 aa8.92□□□□□ -0.98
VPS52-221ENST00000495755 TESPA1A2RU30 521 aaPredicted RBP8.92□□□□□ -0.98
VPS52-221ENST00000495755 IFNL1Q8IU54 200 aa8.92□□□□□ -0.98
VPS52-221ENST00000495755 FTSJ3Q8IY81 847 aaKnown RBP8.92□□□□□ -0.98
VPS52-221ENST00000495755 ZGPATQ8N5A5 531 aaKnown RBP8.92□□□□□ -0.98
VPS52-221ENST00000495755 FAM151AQ8WW52 585 aa8.92□□□□□ -0.98
VPS52-221ENST00000495755 FAM163AQ96GL9 167 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms