RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 NLGN1Q8N2Q7 840 aa12.85□□□□□ -0.35
RAB11FIP3-211ENST00000495663 IRF7Q92985 503 aa12.85□□□□□ -0.35
RAB11FIP3-211ENST00000495663 MTFR1LQ9H019 292 aa12.85□□□□□ -0.35
RAB11FIP3-211ENST00000495663 STK17AQ9UEE5 414 aa12.85□□□□□ -0.35
RAB11FIP3-211ENST00000495663 RCAN3Q9UKA8 241 aa12.85□□□□□ -0.35
RAB11FIP3-211ENST00000495663 PTPRCP08575 1304 aa12.85□□□□□ -0.35
RAB11FIP3-211ENST00000495663 BCAR3O75815 825 aa12.84□□□□□ -0.35
RAB11FIP3-211ENST00000495663 UPP2O95045 317 aa12.84□□□□□ -0.35
RAB11FIP3-211ENST00000495663 ZBTB7AO95365 584 aa12.84□□□□□ -0.35
RAB11FIP3-211ENST00000495663 HLFQ16534 295 aa12.84□□□□□ -0.35
RAB11FIP3-211ENST00000495663 HSP90AB3PQ58FF7 597 aa12.84□□□□□ -0.35
RAB11FIP3-211ENST00000495663 KSR2Q6VAB6 950 aa12.84□□□□□ -0.35
RAB11FIP3-211ENST00000495663 NPAS3Q8IXF0 933 aa12.84□□□□□ -0.35
RAB11FIP3-211ENST00000495663 ADCY9O60503 1353 aa12.83□□□□□ -0.36
RAB11FIP3-211ENST00000495663 ATP10DQ9P241 1426 aa12.83□□□□□ -0.36
RAB11FIP3-211ENST00000495663 PI4KAP2A4QPH2 592 aa12.83□□□□□ -0.36
RAB11FIP3-211ENST00000495663 MSL1Q68DK7 614 aa12.83□□□□□ -0.36
RAB11FIP3-211ENST00000495663 PI4KAP1Q8N8J0 262 aa12.83□□□□□ -0.36
RAB11FIP3-211ENST00000495663 MAP3K2Q9Y2U5 619 aa12.83□□□□□ -0.36
RAB11FIP3-211ENST00000495663 N4BP2Q86UW6 1770 aaPredicted RBP12.83□□□□□ -0.36
RAB11FIP3-211ENST00000495663 IPO8O15397 1037 aaKnown RBP12.82□□□□□ -0.36
RAB11FIP3-211ENST00000495663 TCIRG1Q13488 830 aa12.82□□□□□ -0.36
RAB11FIP3-211ENST00000495663 TBC1D9BQ66K14 1250 aa12.82□□□□□ -0.36
RAB11FIP3-211ENST00000495663 PPP2R2DQ66LE6 453 aa12.82□□□□□ -0.36
RAB11FIP3-211ENST00000495663 PDXDC2PQ6P474 469 aa12.82□□□□□ -0.36
RAB11FIP3-211ENST00000495663 EPS8L1Q8TE68 723 aa12.82□□□□□ -0.36
RAB11FIP3-211ENST00000495663 SLC10A4Q96EP9 437 aa12.82□□□□□ -0.36
RAB11FIP3-211ENST00000495663 NOB1Q9ULX3 412 aaKnown RBP12.82□□□□□ -0.36
RAB11FIP3-211ENST00000495663 POLD1P28340 1107 aa12.81□□□□□ -0.36
RAB11FIP3-211ENST00000495663 TM4SF1P30408 202 aa12.81□□□□□ -0.36
RAB11FIP3-211ENST00000495663 NEXNQ0ZGT2 675 aa12.81□□□□□ -0.36
RAB11FIP3-211ENST00000495663 BICDL1Q6ZP65 573 aa12.81□□□□□ -0.36
RAB11FIP3-211ENST00000495663 ZBTB33Q86T24 672 aa12.81□□□□□ -0.36
RAB11FIP3-211ENST00000495663 DNAAF4Q8WXU2 420 aa12.81□□□□□ -0.36
RAB11FIP3-211ENST00000495663 ARHGAP45Q92619 1136 aa12.81□□□□□ -0.36
RAB11FIP3-211ENST00000495663 FRAT1Q92837 279 aaPredicted RBP12.81□□□□□ -0.36
RAB11FIP3-211ENST00000495663 SETDB2Q96T68 719 aa12.81□□□□□ -0.36
RAB11FIP3-211ENST00000495663 METTL22Q9BUU2 404 aaPredicted RBP12.81□□□□□ -0.36
RAB11FIP3-211ENST00000495663 API5Q9BZZ5 524 aaKnown RBP12.81□□□□□ -0.36
RAB11FIP3-211ENST00000495663 SPON1Q9HCB6 807 aa12.81□□□□□ -0.36
RAB11FIP3-211ENST00000495663 HMX1Q9NP08 348 aaPredicted RBP12.81□□□□□ -0.36
RAB11FIP3-211ENST00000495663 NIP7Q9Y221 180 aaKnown RBP eCLIP12.81□□□□□ -0.36
RAB11FIP3-211ENST00000495663 CARMIL3Q8ND23 1372 aa12.81□□□□□ -0.36
RAB11FIP3-211ENST00000495663 PXDNLA1KZ92 1463 aa12.8□□□□□ -0.36
RAB11FIP3-211ENST00000495663 NRXN2Q9P2S2 1712 aa12.8□□□□□ -0.36
RAB11FIP3-211ENST00000495663 F6X3S4 739 aa12.8□□□□□ -0.36
RAB11FIP3-211ENST00000495663 MMP10P09238 476 aa12.8□□□□□ -0.36
RAB11FIP3-211ENST00000495663 NFIXQ14938 502 aa12.8□□□□□ -0.36
RAB11FIP3-211ENST00000495663 PPP1R26Q5T8A7 1209 aaPredicted RBP12.8□□□□□ -0.36
RAB11FIP3-211ENST00000495663 ZKSCAN2Q63HK3 967 aa12.8□□□□□ -0.36
RAB11FIP3-211ENST00000495663 ZNF34Q8IZ26 560 aa12.8□□□□□ -0.36
RAB11FIP3-211ENST00000495663 MYD88Q99836 296 aa12.8□□□□□ -0.36
RAB11FIP3-211ENST00000495663 PARP3Q9Y6F1 533 aa12.8□□□□□ -0.36
RAB11FIP3-211ENST00000495663 USP17L8P0C7I0 530 aa12.79□□□□□ -0.36
RAB11FIP3-211ENST00000495663 GPTP24298 496 aa12.79□□□□□ -0.36
RAB11FIP3-211ENST00000495663 CBLBQ13191 982 aa12.79□□□□□ -0.36
RAB11FIP3-211ENST00000495663 PARP10Q53GL7 1025 aa12.79□□□□□ -0.36
RAB11FIP3-211ENST00000495663 SLC4A10Q6U841 1118 aa12.79□□□□□ -0.36
RAB11FIP3-211ENST00000495663 ATF7IPQ6VMQ6 1270 aa12.79□□□□□ -0.36
RAB11FIP3-211ENST00000495663 KCTD15Q96SI1 283 aaPredicted RBP12.79□□□□□ -0.36
RAB11FIP3-211ENST00000495663 OCSTAMPQ9BR26 566 aa12.79□□□□□ -0.36
RAB11FIP3-211ENST00000495663 ISCA1Q9BUE6 129 aa12.79□□□□□ -0.36
RAB11FIP3-211ENST00000495663 ATP5J2-PTCD1G3V325 749 aa12.78□□□□□ -0.36
RAB11FIP3-211ENST00000495663 POLRMTO00411 1230 aaKnown RBP12.78□□□□□ -0.36
RAB11FIP3-211ENST00000495663 DDR1Q08345 913 aa12.78□□□□□ -0.36
RAB11FIP3-211ENST00000495663 PPP1R42Q7Z4L9 355 aa12.78□□□□□ -0.36
RAB11FIP3-211ENST00000495663 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.78□□□□□ -0.36
RAB11FIP3-211ENST00000495663 DNMT3LQ9UJW3 386 aa12.78□□□□□ -0.36
RAB11FIP3-211ENST00000495663 UBN2Q6ZU65 1347 aa12.78□□□□□ -0.36
RAB11FIP3-211ENST00000495663 LRP5O75197 1615 aa12.77□□□□□ -0.36
RAB11FIP3-211ENST00000495663 NPHP1O15259 732 aa12.77□□□□□ -0.37
RAB11FIP3-211ENST00000495663 SERPINB2P05120 415 aa12.77□□□□□ -0.37
RAB11FIP3-211ENST00000495663 TRIM27P14373 513 aa12.77□□□□□ -0.37
RAB11FIP3-211ENST00000495663 TRIM28Q13263 835 aaKnown RBP12.77□□□□□ -0.37
RAB11FIP3-211ENST00000495663 NLRP10Q86W26 655 aa12.77□□□□□ -0.37
RAB11FIP3-211ENST00000495663 NBPF5PQ86XG9 351 aaPredicted RBP12.77□□□□□ -0.37
RAB11FIP3-211ENST00000495663 CCDC191Q8NCU4 936 aa12.77□□□□□ -0.37
RAB11FIP3-211ENST00000495663 LINS1Q8NG48 757 aa12.77□□□□□ -0.37
RAB11FIP3-211ENST00000495663 NYXQ9GZU5 481 aa12.77□□□□□ -0.37
RAB11FIP3-211ENST00000495663 IBTKQ9P2D0 1353 aaPredicted RBP12.77□□□□□ -0.37
RAB11FIP3-211ENST00000495663 KIF13BQ9NQT8 1826 aa12.76□□□□□ -0.37
RAB11FIP3-211ENST00000495663 FAM177BA6PVY3 158 aa12.76□□□□□ -0.37
RAB11FIP3-211ENST00000495663 NEURL1BA8MQ27 555 aa12.76□□□□□ -0.37
RAB11FIP3-211ENST00000495663 IGKV5-2P06315 115 aa12.76□□□□□ -0.37
RAB11FIP3-211ENST00000495663 CWF19L2Q2TBE0 894 aaKnown RBP12.76□□□□□ -0.37
RAB11FIP3-211ENST00000495663 BEND3Q5T5X7 828 aa12.76□□□□□ -0.37
RAB11FIP3-211ENST00000495663 SUSD4Q5VX71 490 aa12.76□□□□□ -0.37
RAB11FIP3-211ENST00000495663 TPTE2Q6XPS3 522 aa12.76□□□□□ -0.37
RAB11FIP3-211ENST00000495663 TSEN34Q9BSV6 310 aaKnown RBP12.76□□□□□ -0.37
RAB11FIP3-211ENST00000495663 SRCIN1Q9C0H9 1055 aa12.76□□□□□ -0.37
RAB11FIP3-211ENST00000495663 CWC25Q9NXE8 425 aaPredicted RBP12.76□□□□□ -0.37
RAB11FIP3-211ENST00000495663 ABCC4O15439 1325 aa12.76□□□□□ -0.37
RAB11FIP3-211ENST00000495663 LAMB2P55268 1798 aa12.76□□□□□ -0.37
RAB11FIP3-211ENST00000495663 ALDH1L1O75891 902 aa12.75□□□□□ -0.37
RAB11FIP3-211ENST00000495663 NTSR2O95665 410 aa12.75□□□□□ -0.37
RAB11FIP3-211ENST00000495663 GTF2E1P29083 439 aaPredicted RBP12.75□□□□□ -0.37
RAB11FIP3-211ENST00000495663 CCT4P50991 539 aaKnown RBP12.75□□□□□ -0.37
RAB11FIP3-211ENST00000495663 PTK2Q05397 1052 aa12.75□□□□□ -0.37
RAB11FIP3-211ENST00000495663 RNF123Q5XPI4 1314 aa12.75□□□□□ -0.37
RAB11FIP3-211ENST00000495663 FTSJ3Q8IY81 847 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms