RNA–Protein interactions for RNA: ENST00000495636.1

SLC6A1-205, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 1,088 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-205ENST00000495636 IQSEC3Q9UPP2 1182 aaPredicted RBP20.09■□□□□ 0.81
SLC6A1-205ENST00000495636 LAMB1P07942 1786 aa20.08■□□□□ 0.81
SLC6A1-205ENST00000495636 IFIT1P09914 478 aaKnown RBP20.08■□□□□ 0.81
SLC6A1-205ENST00000495636 CT47B1P0C2W7 299 aaPredicted RBP20.08■□□□□ 0.81
SLC6A1-205ENST00000495636 HDLBPQ00341 1268 aaKnown RBP20.08■□□□□ 0.81
SLC6A1-205ENST00000495636 PUM3Q15397 648 aaKnown RBP20.08■□□□□ 0.81
SLC6A1-205ENST00000495636 ANKRD13AQ8IZ07 590 aa20.08■□□□□ 0.81
SLC6A1-205ENST00000495636 TRMT2AQ8IZ69 625 aaKnown RBP20.08■□□□□ 0.81
SLC6A1-205ENST00000495636 USP2O75604 605 aaPredicted RBP20.07■□□□□ 0.8
SLC6A1-205ENST00000495636 FGFR2P21802 821 aa20.07■□□□□ 0.8
SLC6A1-205ENST00000495636 GRIK5Q16478 980 aa20.07■□□□□ 0.8
SLC6A1-205ENST00000495636 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.07■□□□□ 0.8
SLC6A1-205ENST00000495636 EYA2O00167 538 aa20.06■□□□□ 0.8
SLC6A1-205ENST00000495636 FKTNO75072 461 aa20.06■□□□□ 0.8
SLC6A1-205ENST00000495636 RFX5P48382 616 aaPredicted RBP20.06■□□□□ 0.8
SLC6A1-205ENST00000495636 TNNI2P48788 182 aa20.06■□□□□ 0.8
SLC6A1-205ENST00000495636 BCAMP50895 628 aa20.06■□□□□ 0.8
SLC6A1-205ENST00000495636 IFNL1Q8IU54 200 aa20.06■□□□□ 0.8
SLC6A1-205ENST00000495636 UBTFL1P0CB47 393 aaPredicted RBP20.05■□□□□ 0.8
SLC6A1-205ENST00000495636 TEKT1Q969V4 418 aa20.05■□□□□ 0.8
SLC6A1-205ENST00000495636 TEPSINQ96N21 525 aa20.05■□□□□ 0.8
SLC6A1-205ENST00000495636 HPS5Q9UPZ3 1129 aa20.05■□□□□ 0.8
SLC6A1-205ENST00000495636 SUGT1Q9Y2Z0 365 aa20.05■□□□□ 0.8
SLC6A1-205ENST00000495636 OTOFQ9HC10 1997 aa20.04■□□□□ 0.8
SLC6A1-205ENST00000495636 MAST3O60307 1309 aa20.04■□□□□ 0.8
SLC6A1-205ENST00000495636 TCP10L2B9ZVM9 353 aa20.04■□□□□ 0.8
SLC6A1-205ENST00000495636 SLC5A1P13866 664 aa20.04■□□□□ 0.8
SLC6A1-205ENST00000495636 SOX10P56693 466 aa20.04■□□□□ 0.8
SLC6A1-205ENST00000495636 LPIN2Q92539 896 aa20.04■□□□□ 0.8
SLC6A1-205ENST00000495636 MRIQ9BWK5 157 aa20.04■□□□□ 0.8
SLC6A1-205ENST00000495636 R3HDMLQ9H3Y0 253 aa20.04■□□□□ 0.8
SLC6A1-205ENST00000495636 FBXO3Q9UK99 471 aa20.04■□□□□ 0.8
SLC6A1-205ENST00000495636 IGF2BP3O00425 579 aaKnown RBP eCLIP20.03■□□□□ 0.8
SLC6A1-205ENST00000495636 GJA5P36382 358 aa20.03■□□□□ 0.8
SLC6A1-205ENST00000495636 ZDHHC15Q96MV8 337 aa20.03■□□□□ 0.8
SLC6A1-205ENST00000495636 API5Q9BZZ5 524 aaKnown RBP20.03■□□□□ 0.8
SLC6A1-205ENST00000495636 TMEM39BQ9GZU3 492 aa20.03■□□□□ 0.8
SLC6A1-205ENST00000495636 NOB1Q9ULX3 412 aaKnown RBP20.03■□□□□ 0.8
SLC6A1-205ENST00000495636 CCER2I3L3R5 266 aa20.02■□□□□ 0.8
SLC6A1-205ENST00000495636 OTUD7BQ6GQQ9 843 aa20.02■□□□□ 0.8
SLC6A1-205ENST00000495636 FBXO46Q6PJ61 603 aaPredicted RBP20.02■□□□□ 0.8
SLC6A1-205ENST00000495636 CDAN1Q8IWY9 1227 aa20.02■□□□□ 0.8
SLC6A1-205ENST00000495636 TMOD2Q9NZR1 351 aa20.02■□□□□ 0.8
SLC6A1-205ENST00000495636 HDAC5Q9UQL6 1122 aa20.02■□□□□ 0.8
SLC6A1-205ENST00000495636 CIAO1O76071 339 aa20.01■□□□□ 0.79
SLC6A1-205ENST00000495636 ATG9AQ7Z3C6 839 aa20.01■□□□□ 0.79
SLC6A1-205ENST00000495636 OPTNQ96CV9 577 aa20.01■□□□□ 0.79
SLC6A1-205ENST00000495636 ELP3Q9H9T3 547 aa20.01■□□□□ 0.79
SLC6A1-205ENST00000495636 MYH13Q9UKX3 1938 aa20■□□□□ 0.79
SLC6A1-205ENST00000495636 TESPA1A2RU30 521 aaPredicted RBP20■□□□□ 0.79
SLC6A1-205ENST00000495636 FKBP1CQ5VVH2 108 aa20■□□□□ 0.79
SLC6A1-205ENST00000495636 PPP1R3FQ6ZSY5 799 aaPredicted RBP20■□□□□ 0.79
SLC6A1-205ENST00000495636 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20■□□□□ 0.79
SLC6A1-205ENST00000495636 WDR66Q8TBY9 1149 aa20■□□□□ 0.79
SLC6A1-205ENST00000495636 CACNB3P54284 484 aa19.99■□□□□ 0.79
SLC6A1-205ENST00000495636 MAP3K9P80192 1104 aa19.99■□□□□ 0.79
SLC6A1-205ENST00000495636 APOBEC3HQ6NTF7 200 aaKnown RBP19.99■□□□□ 0.79
SLC6A1-205ENST00000495636 HHIPL2Q6UWX4 724 aa19.99■□□□□ 0.79
SLC6A1-205ENST00000495636 FAM83AQ86UY5 434 aa19.99■□□□□ 0.79
SLC6A1-205ENST00000495636 CEP126Q9P2H0 1117 aa19.99■□□□□ 0.79
SLC6A1-205ENST00000495636 CSADQ9Y600 493 aa19.99■□□□□ 0.79
SLC6A1-205ENST00000495636 RPAP1Q9BWH6 1393 aaPredicted RBP19.98■□□□□ 0.79
SLC6A1-205ENST00000495636 VGLL4Q14135 290 aa19.98■□□□□ 0.79
SLC6A1-205ENST00000495636 ATP2B3Q16720 1220 aa19.98■□□□□ 0.79
SLC6A1-205ENST00000495636 HOOK2Q96ED9 719 aa19.98■□□□□ 0.79
SLC6A1-205ENST00000495636 SIL1Q9H173 461 aa19.98■□□□□ 0.79
SLC6A1-205ENST00000495636 LRRFIP2Q9Y608 721 aaKnown RBP19.98■□□□□ 0.79
SLC6A1-205ENST00000495636 RARSP54136 660 aaKnown RBP19.97■□□□□ 0.79
SLC6A1-205ENST00000495636 CRHR2Q13324 411 aa19.97■□□□□ 0.79
SLC6A1-205ENST00000495636 PTPN18Q99952 460 aa19.97■□□□□ 0.79
SLC6A1-205ENST00000495636 PDE4DIPQ5VU43 2346 aa19.97■□□□□ 0.79
SLC6A1-205ENST00000495636 IL15P40933 162 aaPredicted RBP19.96■□□□□ 0.79
SLC6A1-205ENST00000495636 ERO1AQ96HE7 468 aa19.96■□□□□ 0.79
SLC6A1-205ENST00000495636 MS4A4AQ96JQ5 239 aa19.96■□□□□ 0.79
SLC6A1-205ENST00000495636 GNL3LQ9NVN8 582 aaKnown RBP19.96■□□□□ 0.79
SLC6A1-205ENST00000495636 TRIM17Q9Y577 477 aa19.96■□□□□ 0.79
SLC6A1-205ENST00000495636 GTF2A2P52657 109 aa19.95■□□□□ 0.78
SLC6A1-205ENST00000495636 OTOP1Q7RTM1 612 aa19.95■□□□□ 0.78
SLC6A1-205ENST00000495636 CNKSR2Q8WXI2 1034 aa19.95■□□□□ 0.78
SLC6A1-205ENST00000495636 ARHGAP45Q92619 1136 aa19.95■□□□□ 0.78
SLC6A1-205ENST00000495636 MEIS3Q99687 375 aa19.95■□□□□ 0.78
SLC6A1-205ENST00000495636 SPDYE5A6NIY4 337 aa19.94■□□□□ 0.78
SLC6A1-205ENST00000495636 SEMA3EO15041 775 aa19.94■□□□□ 0.78
SLC6A1-205ENST00000495636 DCAF15Q66K64 600 aa19.94■□□□□ 0.78
SLC6A1-205ENST00000495636 BRI3BPQ8WY22 251 aa19.94■□□□□ 0.78
SLC6A1-205ENST00000495636 OTUD5Q96G74 571 aa19.94■□□□□ 0.78
SLC6A1-205ENST00000495636 WRNIP1Q96S55 665 aa19.94■□□□□ 0.78
SLC6A1-205ENST00000495636 COPRSQ9NQ92 184 aa19.94■□□□□ 0.78
SLC6A1-205ENST00000495636 PA2G4Q9UQ80 394 aaKnown RBP19.94■□□□□ 0.78
SLC6A1-205ENST00000495636 DAGLAQ9Y4D2 1042 aa19.94■□□□□ 0.78
SLC6A1-205ENST00000495636 CCL15-CCL14A0A0B4J2E2 113 aa19.93■□□□□ 0.78
SLC6A1-205ENST00000495636 ZBTB22O15209 634 aa19.93■□□□□ 0.78
SLC6A1-205ENST00000495636 PRDX5P30044 214 aa19.93■□□□□ 0.78
SLC6A1-205ENST00000495636 CCL15Q16663 113 aa19.93■□□□□ 0.78
SLC6A1-205ENST00000495636 INTS3Q68E01 1043 aaKnown RBP19.93■□□□□ 0.78
SLC6A1-205ENST00000495636 DENND2AQ9ULE3 1009 aa19.93■□□□□ 0.78
SLC6A1-205ENST00000495636 SNCAIPQ9Y6H5 919 aa19.93■□□□□ 0.78
SLC6A1-205ENST00000495636 SALL1Q9NSC2 1324 aa19.93■□□□□ 0.78
SLC6A1-205ENST00000495636 LDHBP07195 334 aaKnown RBP19.92■□□□□ 0.78
SLC6A1-205ENST00000495636 GNAI3P08754 354 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms