RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 CYP7A1P22680 504 aa18.88■□□□□ 0.61
PHF1-211ENST00000495509 PTH1RQ03431 593 aa18.88■□□□□ 0.61
PHF1-211ENST00000495509 CCDC88AQ3V6T2 1871 aa18.88■□□□□ 0.61
PHF1-211ENST00000495509 REC8O95072 547 aa18.88■□□□□ 0.61
PHF1-211ENST00000495509 YBX3P16989 372 aaKnown RBP eCLIP18.88■□□□□ 0.61
PHF1-211ENST00000495509 SPTY2D1Q68D10 685 aaPredicted RBP18.88■□□□□ 0.61
PHF1-211ENST00000495509 ARHGAP27Q6ZUM4 889 aa18.88■□□□□ 0.61
PHF1-211ENST00000495509 ZGPATQ8N5A5 531 aaKnown RBP18.88■□□□□ 0.61
PHF1-211ENST00000495509 LSG1Q9H089 658 aaKnown RBP18.88■□□□□ 0.61
PHF1-211ENST00000495509 VPS33BQ9H267 617 aa18.88■□□□□ 0.61
PHF1-211ENST00000495509 TBC1D22AQ8WUA7 517 aa18.87■□□□□ 0.61
PHF1-211ENST00000495509 RAD50Q92878 1312 aa18.86■□□□□ 0.61
PHF1-211ENST00000495509 DACT2Q5SW24 774 aa18.86■□□□□ 0.61
PHF1-211ENST00000495509 STRIP1Q5VSL9 837 aa18.86■□□□□ 0.61
PHF1-211ENST00000495509 NAA16Q6N069 864 aaPredicted RBP18.86■□□□□ 0.61
PHF1-211ENST00000495509 MIGA1Q8NAN2 632 aa18.86■□□□□ 0.61
PHF1-211ENST00000495509 LTBP3Q9NS15 1303 aa18.86■□□□□ 0.61
PHF1-211ENST00000495509 USP17L3A6NCW0 530 aa18.86■□□□□ 0.61
PHF1-211ENST00000495509 USP17L4A6NCW7 530 aa18.86■□□□□ 0.61
PHF1-211ENST00000495509 RAD17O75943 681 aa18.86■□□□□ 0.61
PHF1-211ENST00000495509 DIXDC1Q155Q3 683 aa18.86■□□□□ 0.61
PHF1-211ENST00000495509 VPS53Q5VIR6 699 aa18.86■□□□□ 0.61
PHF1-211ENST00000495509 KIAA1211Q6ZU35 1233 aa18.86■□□□□ 0.61
PHF1-211ENST00000495509 USP17L1Q7RTZ2 530 aa18.86■□□□□ 0.61
PHF1-211ENST00000495509 C22orf23Q9BZE7 217 aa18.86■□□□□ 0.61
PHF1-211ENST00000495509 UPF2Q9HAU5 1272 aaKnown RBP18.86■□□□□ 0.61
PHF1-211ENST00000495509 CCDC171Q6TFL3 1326 aa18.85■□□□□ 0.61
PHF1-211ENST00000495509 ZNF646O15015 1829 aaPredicted RBP18.85■□□□□ 0.61
PHF1-211ENST00000495509 F8W031 263 aaPredicted RBP18.85■□□□□ 0.61
PHF1-211ENST00000495509 DZIP1Q86YF9 867 aaKnown RBP18.85■□□□□ 0.61
PHF1-211ENST00000495509 NIM1KQ8IY84 436 aa18.85■□□□□ 0.61
PHF1-211ENST00000495509 TBC1D32Q96NH3 1257 aa18.85■□□□□ 0.61
PHF1-211ENST00000495509 ZNRF3Q9ULT6 936 aa18.85■□□□□ 0.61
PHF1-211ENST00000495509 GPAA1O43292 621 aa18.84■□□□□ 0.61
PHF1-211ENST00000495509 ARMT1Q9H993 441 aa18.84■□□□□ 0.61
PHF1-211ENST00000495509 MYH2Q9UKX2 1941 aa18.84■□□□□ 0.61
PHF1-211ENST00000495509 MBD4O95243 580 aa18.83■□□□□ 0.61
PHF1-211ENST00000495509 DYNLL1P63167 89 aaKnown RBP18.83■□□□□ 0.61
PHF1-211ENST00000495509 FOXP2O15409 715 aa18.83■□□□□ 0.6
PHF1-211ENST00000495509 JDP2Q8WYK2 163 aa18.83■□□□□ 0.6
PHF1-211ENST00000495509 MAP4K1Q92918 833 aa18.83■□□□□ 0.6
PHF1-211ENST00000495509 AIDAQ96BJ3 306 aa18.83■□□□□ 0.6
PHF1-211ENST00000495509 STRBPQ96SI9 672 aaKnown RBP18.83■□□□□ 0.6
PHF1-211ENST00000495509 PSMD14O00487 310 aa18.82■□□□□ 0.6
PHF1-211ENST00000495509 EIF5BO60841 1220 aaKnown RBP18.82■□□□□ 0.6
PHF1-211ENST00000495509 HSPD1P10809 573 aaKnown RBP18.82■□□□□ 0.6
PHF1-211ENST00000495509 LCORLQ8N3X6 602 aa18.82■□□□□ 0.6
PHF1-211ENST00000495509 PSME4Q14997 1843 aa18.81■□□□□ 0.6
PHF1-211ENST00000495509 SCNN1DP51172 638 aa18.81■□□□□ 0.6
PHF1-211ENST00000495509 CXCL9Q07325 125 aa18.81■□□□□ 0.6
PHF1-211ENST00000495509 KIAA0825Q8IV33 1275 aa18.81■□□□□ 0.6
PHF1-211ENST00000495509 TTF2Q9UNY4 1162 aaKnown RBP18.81■□□□□ 0.6
PHF1-211ENST00000495509 SBF1O95248 1867 aa18.81■□□□□ 0.6
PHF1-211ENST00000495509 MAGEB6P1A0A0J9YX57 407 aa18.81■□□□□ 0.6
PHF1-211ENST00000495509 PRKAB2O43741 272 aa18.81■□□□□ 0.6
PHF1-211ENST00000495509 VIL1P09327 827 aaKnown RBP18.81■□□□□ 0.6
PHF1-211ENST00000495509 RBM25P49756 843 aaKnown RBP18.81■□□□□ 0.6
PHF1-211ENST00000495509 RIOK1Q9BRS2 568 aaKnown RBP18.81■□□□□ 0.6
PHF1-211ENST00000495509 AATFQ9NY61 560 aaKnown RBP eCLIP18.81■□□□□ 0.6
PHF1-211ENST00000495509 SUGT1Q9Y2Z0 365 aa18.81■□□□□ 0.6
PHF1-211ENST00000495509 RBM8AQ9Y5S9 174 aaKnown RBP18.81■□□□□ 0.6
PHF1-211ENST00000495509 MAST2Q6P0Q8 1798 aa18.8■□□□□ 0.6
PHF1-211ENST00000495509 FKBP1AP62942 108 aaKnown RBP18.8■□□□□ 0.6
PHF1-211ENST00000495509 ZBTB12Q9Y330 459 aaPredicted RBP18.8■□□□□ 0.6
PHF1-211ENST00000495509 GSTO1P78417 241 aa18.79■□□□□ 0.6
PHF1-211ENST00000495509 RSBN1LQ6PCB5 846 aaPredicted RBP18.79■□□□□ 0.6
PHF1-211ENST00000495509 PALD1Q9ULE6 856 aa18.79■□□□□ 0.6
PHF1-211ENST00000495509 GPR162Q16538 588 aa18.78■□□□□ 0.6
PHF1-211ENST00000495509 DSCC1Q9BVC3 393 aa18.78■□□□□ 0.6
PHF1-211ENST00000495509 MROH7-TTC4A0A0A0MT08 1334 aa18.78■□□□□ 0.6
PHF1-211ENST00000495509 FZD9O00144 591 aa18.78■□□□□ 0.6
PHF1-211ENST00000495509 IGSF3O75054 1194 aa18.78■□□□□ 0.6
PHF1-211ENST00000495509 LDHCP07864 332 aa18.78■□□□□ 0.6
PHF1-211ENST00000495509 LMNB1P20700 586 aa18.78■□□□□ 0.6
PHF1-211ENST00000495509 HSPA4P34932 840 aa18.78■□□□□ 0.6
PHF1-211ENST00000495509 NECTIN1Q15223 517 aa18.78■□□□□ 0.6
PHF1-211ENST00000495509 CIAPIN1Q6FI81 312 aa18.78■□□□□ 0.6
PHF1-211ENST00000495509 FAM163AQ96GL9 167 aaPredicted RBP18.78■□□□□ 0.6
PHF1-211ENST00000495509 GMLQ99445 158 aa18.78■□□□□ 0.6
PHF1-211ENST00000495509 KIF2CQ99661 725 aa18.78■□□□□ 0.6
PHF1-211ENST00000495509 DAGLAQ9Y4D2 1042 aa18.78■□□□□ 0.6
PHF1-211ENST00000495509 PCDHAC2Q9Y5I4 1007 aa18.78■□□□□ 0.6
PHF1-211ENST00000495509 SLC4A4Q9Y6R1 1079 aa18.78■□□□□ 0.6
PHF1-211ENST00000495509 GSG1L2A8MUP6 293 aa18.77■□□□□ 0.6
PHF1-211ENST00000495509 EPB41L2O43491 1005 aaKnown RBP18.77■□□□□ 0.6
PHF1-211ENST00000495509 FGAP02671 866 aa18.77■□□□□ 0.6
PHF1-211ENST00000495509 APPP05067 770 aa18.77■□□□□ 0.6
PHF1-211ENST00000495509 TMED8Q6PL24 325 aaPredicted RBP18.77■□□□□ 0.6
PHF1-211ENST00000495509 RASEFQ8IZ41 740 aa18.77■□□□□ 0.6
PHF1-211ENST00000495509 ADAMTSL1Q8N6G6 1762 aa18.77■□□□□ 0.59
PHF1-211ENST00000495509 GPR75-ASB3A0A0A6YYF3 556 aa18.76■□□□□ 0.59
PHF1-211ENST00000495509 PATL2C9JE40 543 aaKnown RBP18.76■□□□□ 0.59
PHF1-211ENST00000495509 BTDP43251 543 aa18.76■□□□□ 0.59
PHF1-211ENST00000495509 SH3RF3Q8TEJ3 882 aaPredicted RBP18.76■□□□□ 0.59
PHF1-211ENST00000495509 SDR42E1Q8WUS8 393 aa18.76■□□□□ 0.59
PHF1-211ENST00000495509 TAF6LQ9Y6J9 622 aa18.76■□□□□ 0.59
PHF1-211ENST00000495509 DICER1Q9UPY3 1922 aaKnown RBP18.76■□□□□ 0.59
PHF1-211ENST00000495509 GAKO14976 1311 aa18.76■□□□□ 0.59
PHF1-211ENST00000495509 PPP4CP60510 307 aa18.76■□□□□ 0.59
PHF1-211ENST00000495509 CREB3L3Q68CJ9 461 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms