RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 ITPRIPQ8IWB1 547 aa21.43■■□□□ 1.02
CTNS-207ENST00000495445 AIDAQ96BJ3 306 aa21.43■■□□□ 1.02
CTNS-207ENST00000495445 PRDM10Q9NQV6 1147 aa21.43■■□□□ 1.02
CTNS-207ENST00000495445 GNL3LQ9NVN8 582 aaKnown RBP21.43■■□□□ 1.02
CTNS-207ENST00000495445 ZNF70Q9UC06 446 aaPredicted RBP21.43■■□□□ 1.02
CTNS-207ENST00000495445 AKAP2Q9Y2D5 859 aa21.43■■□□□ 1.02
CTNS-207ENST00000495445 CLRN2A0PK11 232 aa21.42■■□□□ 1.02
CTNS-207ENST00000495445 SEMA3EO15041 775 aa21.42■■□□□ 1.02
CTNS-207ENST00000495445 SLC10A3P09131 477 aa21.42■■□□□ 1.02
CTNS-207ENST00000495445 CCDC102BQ68D86 513 aa21.42■■□□□ 1.02
CTNS-207ENST00000495445 PANK1Q8TE04 598 aa21.42■■□□□ 1.02
CTNS-207ENST00000495445 SALL1Q9NSC2 1324 aa21.41■■□□□ 1.02
CTNS-207ENST00000495445 A0A1B0GUL7 405 aa21.41■■□□□ 1.02
CTNS-207ENST00000495445 UBE2Q2LH0YL09 131 aa21.41■■□□□ 1.02
CTNS-207ENST00000495445 MS4A1P11836 297 aa21.41■■□□□ 1.02
CTNS-207ENST00000495445 NF2P35240 595 aa21.41■■□□□ 1.02
CTNS-207ENST00000495445 G3BP1Q13283 466 aaKnown RBP eCLIP21.41■■□□□ 1.02
CTNS-207ENST00000495445 LDLRAD1Q5T700 205 aa21.41■■□□□ 1.02
CTNS-207ENST00000495445 APOBEC3HQ6NTF7 200 aaKnown RBP21.41■■□□□ 1.02
CTNS-207ENST00000495445 HHIPL2Q6UWX4 724 aa21.41■■□□□ 1.02
CTNS-207ENST00000495445 XAGE2Q96GT9 111 aa21.41■■□□□ 1.02
CTNS-207ENST00000495445 ZDHHC15Q96MV8 337 aa21.41■■□□□ 1.02
CTNS-207ENST00000495445 TDRD3Q9H7E2 651 aaKnown RBP21.41■■□□□ 1.02
CTNS-207ENST00000495445 DENND2AQ9ULE3 1009 aa21.41■■□□□ 1.02
CTNS-207ENST00000495445 HSPA8P11142 646 aaKnown RBP21.4■■□□□ 1.02
CTNS-207ENST00000495445 MAP3K11Q16584 847 aa21.4■■□□□ 1.02
CTNS-207ENST00000495445 TEKT1Q969V4 418 aa21.4■■□□□ 1.02
CTNS-207ENST00000495445 RCAN3Q9UKA8 241 aa21.4■■□□□ 1.02
CTNS-207ENST00000495445 NOP58Q9Y2X3 529 aaKnown RBP21.4■■□□□ 1.02
CTNS-207ENST00000495445 RASA3Q14644 834 aa21.39■■□□□ 1.01
CTNS-207ENST00000495445 IFFO2Q5TF58 517 aa21.39■■□□□ 1.01
CTNS-207ENST00000495445 RASAL3Q86YV0 1011 aa21.39■■□□□ 1.01
CTNS-207ENST00000495445 C1orf115Q9H7X2 142 aa21.39■■□□□ 1.01
CTNS-207ENST00000495445 VEZTQ9HBM0 779 aa21.39■■□□□ 1.01
CTNS-207ENST00000495445 MAST3O60307 1309 aa21.38■■□□□ 1.01
CTNS-207ENST00000495445 PDS5AQ29RF7 1337 aaKnown RBP21.38■■□□□ 1.01
CTNS-207ENST00000495445 LBX1P52954 281 aa21.38■■□□□ 1.01
CTNS-207ENST00000495445 KIF23Q02241 960 aaPredicted RBP21.38■■□□□ 1.01
CTNS-207ENST00000495445 SUPT20HL1Q3ZLR7 823 aa21.38■■□□□ 1.01
CTNS-207ENST00000495445 NBPF12Q5TAG4 269 aaPredicted RBP21.38■■□□□ 1.01
CTNS-207ENST00000495445 BEGAINQ9BUH8 593 aa21.38■■□□□ 1.01
CTNS-207ENST00000495445 GPR108Q9NPR9 543 aa21.38■■□□□ 1.01
CTNS-207ENST00000495445 CA12O43570 354 aa21.37■■□□□ 1.01
CTNS-207ENST00000495445 TNFAIP1Q13829 316 aa21.37■■□□□ 1.01
CTNS-207ENST00000495445 ARMC9Q7Z3E5 817 aa21.37■■□□□ 1.01
CTNS-207ENST00000495445 TEPSINQ96N21 525 aa21.37■■□□□ 1.01
CTNS-207ENST00000495445 CSRNP1Q96S65 589 aa21.37■■□□□ 1.01
CTNS-207ENST00000495445 SSC5DA1L4H1 1573 aa21.36■■□□□ 1.01
CTNS-207ENST00000495445 UNCXA6NJT0 531 aa21.36■■□□□ 1.01
CTNS-207ENST00000495445 RASGRF1Q13972 1273 aa21.36■■□□□ 1.01
CTNS-207ENST00000495445 TTLL12Q14166 644 aaPredicted RBP21.36■■□□□ 1.01
CTNS-207ENST00000495445 MVPQ14764 893 aaKnown RBP21.36■■□□□ 1.01
CTNS-207ENST00000495445 FKBP1CQ5VVH2 108 aa21.36■■□□□ 1.01
CTNS-207ENST00000495445 CEP85Q6P2H3 762 aa21.36■■□□□ 1.01
CTNS-207ENST00000495445 MYH13Q9UKX3 1938 aa21.35■■□□□ 1.01
CTNS-207ENST00000495445 USP2O75604 605 aaPredicted RBP21.35■■□□□ 1.01
CTNS-207ENST00000495445 PRDX5P30044 214 aa21.35■■□□□ 1.01
CTNS-207ENST00000495445 REM2Q8IYK8 340 aaPredicted RBP21.35■■□□□ 1.01
CTNS-207ENST00000495445 NEUROD6Q96NK8 337 aa21.35■■□□□ 1.01
CTNS-207ENST00000495445 FZD1Q9UP38 647 aa21.35■■□□□ 1.01
CTNS-207ENST00000495445 PPP1R12BO60237 982 aaPredicted RBP21.34■■□□□ 1.01
CTNS-207ENST00000495445 SURF6O75683 361 aaKnown RBP21.34■■□□□ 1.01
CTNS-207ENST00000495445 LDHBP07195 334 aaKnown RBP21.34■■□□□ 1.01
CTNS-207ENST00000495445 PRKG1Q13976 671 aa21.34■■□□□ 1.01
CTNS-207ENST00000495445 ZGPATQ8N5A5 531 aaKnown RBP21.34■■□□□ 1.01
CTNS-207ENST00000495445 ANGEL1Q9UNK9 670 aaKnown RBP21.34■■□□□ 1.01
CTNS-207ENST00000495445 TCP10L2B9ZVM9 353 aa21.33■■□□□ 1.01
CTNS-207ENST00000495445 ARID4AP29374 1257 aaPredicted RBP21.33■■□□□ 1.01
CTNS-207ENST00000495445 FAM83AQ86UY5 434 aa21.33■■□□□ 1.01
CTNS-207ENST00000495445 ZBTB40Q9NUA8 1239 aa21.33■■□□□ 1.01
CTNS-207ENST00000495445 DAGLAQ9Y4D2 1042 aa21.33■■□□□ 1.01
CTNS-207ENST00000495445 TNNI2P48788 182 aa21.32■■□□□ 1
CTNS-207ENST00000495445 DIXDC1Q155Q3 683 aa21.32■■□□□ 1
CTNS-207ENST00000495445 CDAN1Q8IWY9 1227 aa21.32■■□□□ 1
CTNS-207ENST00000495445 FAM163AQ96GL9 167 aaPredicted RBP21.32■■□□□ 1
CTNS-207ENST00000495445 TMEM39BQ9GZU3 492 aa21.32■■□□□ 1
CTNS-207ENST00000495445 HMG20BQ9P0W2 317 aa21.32■■□□□ 1
CTNS-207ENST00000495445 TM4SF4P48230 202 aa21.31■■□□□ 1
CTNS-207ENST00000495445 TNNI3KQ59H18 835 aa21.31■■□□□ 1
CTNS-207ENST00000495445 SAGE1Q9NXZ1 904 aa21.31■■□□□ 1
CTNS-207ENST00000495445 DDX19BQ9UMR2 479 aa21.31■■□□□ 1
CTNS-207ENST00000495445 COG6Q9Y2V7 657 aa21.31■■□□□ 1
CTNS-207ENST00000495445 FPGT-TNNI3KV9GXZ4 949 aa21.31■■□□□ 1
CTNS-207ENST00000495445 CACNB3P54284 484 aa21.3■■□□□ 1
CTNS-207ENST00000495445 PDE3AQ14432 1141 aa21.3■■□□□ 1
CTNS-207ENST00000495445 CDC42EP5Q6NZY7 148 aa21.3■■□□□ 1
CTNS-207ENST00000495445 TNS4Q8IZW8 715 aa21.3■■□□□ 1
CTNS-207ENST00000495445 SLC10A4Q96EP9 437 aa21.3■■□□□ 1
CTNS-207ENST00000495445 RNF186Q9NXI6 227 aa21.3■■□□□ 1
CTNS-207ENST00000495445 TSKSQ9UJT2 592 aa21.3■■□□□ 1
CTNS-207ENST00000495445 GORABQ5T7V8 394 aa21.29■■□□□ 1
CTNS-207ENST00000495445 SPRYD7Q5W111 196 aa21.29■■□□□ 1
CTNS-207ENST00000495445 SPTY2D1Q68D10 685 aaPredicted RBP21.29■■□□□ 1
CTNS-207ENST00000495445 RPAP2Q8IXW5 612 aaPredicted RBP21.29■■□□□ 1
CTNS-207ENST00000495445 SPATA5Q8NB90 893 aa21.29■■□□□ 1
CTNS-207ENST00000495445 GAKO14976 1311 aa21.29■■□□□ 1
CTNS-207ENST00000495445 UQCRFS1P1P0C7P4 283 aa21.28■■□□□ 1
CTNS-207ENST00000495445 MCAMP43121 646 aa21.28■■□□□ 1
CTNS-207ENST00000495445 IREB2P48200 963 aaKnown RBP21.28■■□□□ 1
CTNS-207ENST00000495445 SIRT2Q8IXJ6 389 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms