RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 SNX14Q9Y5W7 946 aa19.47■□□□□ 0.71
CBX4-204ENST00000495122 ARAP2Q8WZ64 1704 aa19.47■□□□□ 0.71
CBX4-204ENST00000495122 DDX11L8A8MPP1 907 aa19.46■□□□□ 0.71
CBX4-204ENST00000495122 CUL4AQ13619 759 aa19.46■□□□□ 0.71
CBX4-204ENST00000495122 CLEC17AQ6ZS10 378 aa19.46■□□□□ 0.71
CBX4-204ENST00000495122 TRPM4Q8TD43 1214 aa19.46■□□□□ 0.71
CBX4-204ENST00000495122 NEUROD6Q96NK8 337 aa19.46■□□□□ 0.71
CBX4-204ENST00000495122 GBP4Q96PP9 640 aa19.46■□□□□ 0.71
CBX4-204ENST00000495122 HELLSQ9NRZ9 838 aa19.46■□□□□ 0.71
CBX4-204ENST00000495122 MROH5Q6ZUA9 1318 aa19.46■□□□□ 0.71
CBX4-204ENST00000495122 SHTN1A0MZ66 631 aa19.45■□□□□ 0.7
CBX4-204ENST00000495122 TRAF5O00463 557 aa19.45■□□□□ 0.7
CBX4-204ENST00000495122 PSMD14O00487 310 aa19.45■□□□□ 0.7
CBX4-204ENST00000495122 FRAT2O75474 233 aaPredicted RBP19.45■□□□□ 0.7
CBX4-204ENST00000495122 PSMA5P28066 241 aa19.45■□□□□ 0.7
CBX4-204ENST00000495122 NECTIN1Q15223 517 aa19.45■□□□□ 0.7
CBX4-204ENST00000495122 TSGA10IPQ3SY00 556 aa19.45■□□□□ 0.7
CBX4-204ENST00000495122 LDHAL6AQ6ZMR3 332 aa19.45■□□□□ 0.7
CBX4-204ENST00000495122 ZNF594Q96JF6 807 aaPredicted RBP19.45■□□□□ 0.7
CBX4-204ENST00000495122 PAG1Q9NWQ8 432 aa19.45■□□□□ 0.7
CBX4-204ENST00000495122 PGAP2Q9UHJ9 254 aa19.45■□□□□ 0.7
CBX4-204ENST00000495122 UFL1O94874 794 aa19.44■□□□□ 0.7
CBX4-204ENST00000495122 ZFYP08048 801 aaPredicted RBP19.44■□□□□ 0.7
CBX4-204ENST00000495122 IFIT1P09914 478 aaKnown RBP19.44■□□□□ 0.7
CBX4-204ENST00000495122 HIRAP54198 1017 aaPredicted RBP19.44■□□□□ 0.7
CBX4-204ENST00000495122 KRT32Q14532 448 aa19.44■□□□□ 0.7
CBX4-204ENST00000495122 DOK7Q18PE1 504 aa19.44■□□□□ 0.7
CBX4-204ENST00000495122 ANKRD18AQ8IVF6 992 aa19.44■□□□□ 0.7
CBX4-204ENST00000495122 MICALL2Q8IY33 904 aa19.44■□□□□ 0.7
CBX4-204ENST00000495122 SPRYD3Q8NCJ5 442 aa19.44■□□□□ 0.7
CBX4-204ENST00000495122 GREM2Q9H772 168 aa19.44■□□□□ 0.7
CBX4-204ENST00000495122 CNOT7Q9UIV1 285 aaKnown RBP19.44■□□□□ 0.7
CBX4-204ENST00000495122 GGA1Q9UJY5 639 aa19.44■□□□□ 0.7
CBX4-204ENST00000495122 ZBTB12Q9Y330 459 aaPredicted RBP19.44■□□□□ 0.7
CBX4-204ENST00000495122 AKAP11Q9UKA4 1901 aa19.44■□□□□ 0.7
CBX4-204ENST00000495122 ATP2B3Q16720 1220 aa19.43■□□□□ 0.7
CBX4-204ENST00000495122 DEFB115Q30KQ5 88 aa19.43■□□□□ 0.7
CBX4-204ENST00000495122 MCMDC2Q4G0Z9 681 aa19.43■□□□□ 0.7
CBX4-204ENST00000495122 METTL24Q5JXM2 366 aa19.43■□□□□ 0.7
CBX4-204ENST00000495122 GORABQ5T7V8 394 aa19.43■□□□□ 0.7
CBX4-204ENST00000495122 DPF2Q92785 391 aa19.43■□□□□ 0.7
CBX4-204ENST00000495122 CDC5LQ99459 802 aaKnown RBP19.43■□□□□ 0.7
CBX4-204ENST00000495122 DNAJC2Q99543 621 aaKnown RBP19.43■□□□□ 0.7
CBX4-204ENST00000495122 PUS3Q9BZE2 481 aaKnown RBP19.43■□□□□ 0.7
CBX4-204ENST00000495122 ANKIB1Q9P2G1 1089 aa19.43■□□□□ 0.7
CBX4-204ENST00000495122 ABT1Q9ULW3 272 aaKnown RBP19.43■□□□□ 0.7
CBX4-204ENST00000495122 U3KPZ7 1027 aaPredicted RBP19.43■□□□□ 0.7
CBX4-204ENST00000495122 XDHP47989 1333 aa19.43■□□□□ 0.7
CBX4-204ENST00000495122 A0A0D9SFI3 127 aa19.42■□□□□ 0.7
CBX4-204ENST00000495122 MCM4P33991 863 aa19.42■□□□□ 0.7
CBX4-204ENST00000495122 TTC39AQ5SRH9 613 aa19.42■□□□□ 0.7
CBX4-204ENST00000495122 CST9Q5W186 159 aa19.42■□□□□ 0.7
CBX4-204ENST00000495122 ZC3H15Q8WU90 426 aaKnown RBP19.42■□□□□ 0.7
CBX4-204ENST00000495122 TMX3Q96JJ7 454 aa19.42■□□□□ 0.7
CBX4-204ENST00000495122 FAM227BQ96M60 508 aa19.42■□□□□ 0.7
CBX4-204ENST00000495122 ZC3H12CQ9C0D7 883 aaKnown RBP19.42■□□□□ 0.7
CBX4-204ENST00000495122 ALDH8A1Q9H2A2 487 aaPredicted RBP19.42■□□□□ 0.7
CBX4-204ENST00000495122 KCNQ5Q9NR82 932 aa19.42■□□□□ 0.7
CBX4-204ENST00000495122 CNNM1Q9NRU3 951 aa19.42■□□□□ 0.7
CBX4-204ENST00000495122 RBM8AQ9Y5S9 174 aaKnown RBP19.42■□□□□ 0.7
CBX4-204ENST00000495122 H7C1D1 291 aa19.41■□□□□ 0.7
CBX4-204ENST00000495122 RPS12P25398 132 aaKnown RBP19.41■□□□□ 0.7
CBX4-204ENST00000495122 KCNJ4P48050 445 aa19.41■□□□□ 0.7
CBX4-204ENST00000495122 TIMM10P62072 90 aa19.41■□□□□ 0.7
CBX4-204ENST00000495122 PTH1RQ03431 593 aa19.41■□□□□ 0.7
CBX4-204ENST00000495122 VPS53Q5VIR6 699 aa19.41■□□□□ 0.7
CBX4-204ENST00000495122 VGLL2Q8N8G2 317 aa19.41■□□□□ 0.7
CBX4-204ENST00000495122 XAGE2Q96GT9 111 aa19.41■□□□□ 0.7
CBX4-204ENST00000495122 ZSCAN31Q96LW9 406 aaPredicted RBP19.41■□□□□ 0.7
CBX4-204ENST00000495122 TTC14Q96N46 770 aa19.41■□□□□ 0.7
CBX4-204ENST00000495122 GLIS2Q9BZE0 524 aaPredicted RBP19.41■□□□□ 0.7
CBX4-204ENST00000495122 ZSWIM6Q9HCJ5 1215 aa19.41■□□□□ 0.7
CBX4-204ENST00000495122 RPAP1Q9BWH6 1393 aaPredicted RBP19.41■□□□□ 0.7
CBX4-204ENST00000495122 TAF5LO75529 589 aa19.4■□□□□ 0.7
CBX4-204ENST00000495122 PDE8BO95263 885 aa19.4■□□□□ 0.7
CBX4-204ENST00000495122 UQCRFS1P1P0C7P4 283 aa19.4■□□□□ 0.7
CBX4-204ENST00000495122 TTF1Q15361 905 aaPredicted RBP19.4■□□□□ 0.7
CBX4-204ENST00000495122 CREB3L3Q68CJ9 461 aa19.4■□□□□ 0.7
CBX4-204ENST00000495122 CYP46A1Q9Y6A2 500 aa19.4■□□□□ 0.7
CBX4-204ENST00000495122 MYH13Q9UKX3 1938 aa19.4■□□□□ 0.7
CBX4-204ENST00000495122 WDR33Q9C0J8 1336 aaKnown RBP19.4■□□□□ 0.7
CBX4-204ENST00000495122 FOXN1O15353 648 aa19.39■□□□□ 0.69
CBX4-204ENST00000495122 ATP2B4P23634 1241 aa19.39■□□□□ 0.69
CBX4-204ENST00000495122 ANKRD1Q15327 319 aa19.39■□□□□ 0.69
CBX4-204ENST00000495122 PUM3Q15397 648 aaKnown RBP19.39■□□□□ 0.69
CBX4-204ENST00000495122 ZMYM1Q5SVZ6 1142 aa19.39■□□□□ 0.69
CBX4-204ENST00000495122 ZSCAN25Q6NSZ9 544 aa19.39■□□□□ 0.69
CBX4-204ENST00000495122 LPIN2Q92539 896 aa19.39■□□□□ 0.69
CBX4-204ENST00000495122 DSCC1Q9BVC3 393 aa19.39■□□□□ 0.69
CBX4-204ENST00000495122 SH2B1Q9NRF2 756 aaPredicted RBP19.39■□□□□ 0.69
CBX4-204ENST00000495122 BSDC1Q9NW68 430 aaPredicted RBP19.39■□□□□ 0.69
CBX4-204ENST00000495122 TLL2Q9Y6L7 1015 aa19.39■□□□□ 0.69
CBX4-204ENST00000495122 RNF113AO15541 343 aaKnown RBP19.38■□□□□ 0.69
CBX4-204ENST00000495122 EGFRP00533 1210 aa19.38■□□□□ 0.69
CBX4-204ENST00000495122 CYP2E1P05181 493 aaPredicted RBP19.38■□□□□ 0.69
CBX4-204ENST00000495122 VIL1P09327 827 aaKnown RBP19.38■□□□□ 0.69
CBX4-204ENST00000495122 PDIA4P13667 645 aaKnown RBP19.38■□□□□ 0.69
CBX4-204ENST00000495122 SAMD7Q7Z3H4 446 aa19.38■□□□□ 0.69
CBX4-204ENST00000495122 RASEFQ8IZ41 740 aa19.38■□□□□ 0.69
CBX4-204ENST00000495122 TNPO1Q92973 898 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms