RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 ZNF70Q9UC06 446 aaPredicted RBP22.28■■□□□ 1.16
COL20A1-207ENST00000494913 SUGT1Q9Y2Z0 365 aa22.28■■□□□ 1.16
COL20A1-207ENST00000494913 THSD7BQ9C0I4 1608 aa22.27■■□□□ 1.16
COL20A1-207ENST00000494913 A0A1B0GUL7 405 aa22.27■■□□□ 1.16
COL20A1-207ENST00000494913 HDLBPQ00341 1268 aaKnown RBP22.27■■□□□ 1.16
COL20A1-207ENST00000494913 PRKG1Q13976 671 aa22.27■■□□□ 1.16
COL20A1-207ENST00000494913 SPDYE2Q495Y8 402 aa22.27■■□□□ 1.16
COL20A1-207ENST00000494913 TEKT1Q969V4 418 aa22.27■■□□□ 1.16
COL20A1-207ENST00000494913 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.27■■□□□ 1.16
COL20A1-207ENST00000494913 PAPPA2Q9BXP8 1791 aa22.26■■□□□ 1.15
COL20A1-207ENST00000494913 ARAP2Q8WZ64 1704 aa22.26■■□□□ 1.15
COL20A1-207ENST00000494913 POLA2Q14181 598 aa22.26■■□□□ 1.15
COL20A1-207ENST00000494913 CCDC102BQ68D86 513 aa22.26■■□□□ 1.15
COL20A1-207ENST00000494913 RCAN3Q9UKA8 241 aa22.26■■□□□ 1.15
COL20A1-207ENST00000494913 PPP2R3BQ9Y5P8 575 aa22.26■■□□□ 1.15
COL20A1-207ENST00000494913 MS4A1P11836 297 aa22.25■■□□□ 1.15
COL20A1-207ENST00000494913 LBX1P52954 281 aa22.25■■□□□ 1.15
COL20A1-207ENST00000494913 SSH3Q8TE77 659 aa22.25■■□□□ 1.15
COL20A1-207ENST00000494913 XAGE2Q96GT9 111 aa22.25■■□□□ 1.15
COL20A1-207ENST00000494913 NEUROD6Q96NK8 337 aa22.25■■□□□ 1.15
COL20A1-207ENST00000494913 MRIQ9BWK5 157 aa22.25■■□□□ 1.15
COL20A1-207ENST00000494913 DENND2AQ9ULE3 1009 aa22.25■■□□□ 1.15
COL20A1-207ENST00000494913 COL1A1P02452 1464 aaPredicted RBP22.24■■□□□ 1.15
COL20A1-207ENST00000494913 MAST3O60307 1309 aa22.24■■□□□ 1.15
COL20A1-207ENST00000494913 ECM29Q5VYK3 1845 aa22.24■■□□□ 1.15
COL20A1-207ENST00000494913 SEMA3EO15041 775 aa22.24■■□□□ 1.15
COL20A1-207ENST00000494913 SLC10A3P09131 477 aa22.24■■□□□ 1.15
COL20A1-207ENST00000494913 RASA3Q14644 834 aa22.24■■□□□ 1.15
COL20A1-207ENST00000494913 ARMC9Q7Z3E5 817 aa22.24■■□□□ 1.15
COL20A1-207ENST00000494913 HSPA8P11142 646 aaKnown RBP22.23■■□□□ 1.15
COL20A1-207ENST00000494913 KIF23Q02241 960 aaPredicted RBP22.23■■□□□ 1.15
COL20A1-207ENST00000494913 TNFAIP1Q13829 316 aa22.23■■□□□ 1.15
COL20A1-207ENST00000494913 SUPT20HL1Q3ZLR7 823 aa22.23■■□□□ 1.15
COL20A1-207ENST00000494913 RASAL3Q86YV0 1011 aa22.23■■□□□ 1.15
COL20A1-207ENST00000494913 PRDM10Q9NQV6 1147 aa22.23■■□□□ 1.15
COL20A1-207ENST00000494913 FZD1Q9UP38 647 aa22.23■■□□□ 1.15
COL20A1-207ENST00000494913 TCP10L2B9ZVM9 353 aa22.22■■□□□ 1.15
COL20A1-207ENST00000494913 NBPF12Q5TAG4 269 aaPredicted RBP22.22■■□□□ 1.15
COL20A1-207ENST00000494913 ZDHHC15Q96MV8 337 aa22.22■■□□□ 1.15
COL20A1-207ENST00000494913 ANGEL1Q9UNK9 670 aaKnown RBP22.22■■□□□ 1.15
COL20A1-207ENST00000494913 MYH13Q9UKX3 1938 aa22.22■■□□□ 1.15
COL20A1-207ENST00000494913 SURF6O75683 361 aaKnown RBP22.22■■□□□ 1.15
COL20A1-207ENST00000494913 OS9Q13438 667 aaPredicted RBP22.22■■□□□ 1.15
COL20A1-207ENST00000494913 MVPQ14764 893 aaKnown RBP22.22■■□□□ 1.15
COL20A1-207ENST00000494913 GORABQ5T7V8 394 aa22.22■■□□□ 1.15
COL20A1-207ENST00000494913 HHIPL2Q6UWX4 724 aa22.22■■□□□ 1.15
COL20A1-207ENST00000494913 TSKSQ9UJT2 592 aa22.22■■□□□ 1.15
COL20A1-207ENST00000494913 PPP1R12BO60237 982 aaPredicted RBP22.21■■□□□ 1.15
COL20A1-207ENST00000494913 LDHBP07195 334 aaKnown RBP22.21■■□□□ 1.15
COL20A1-207ENST00000494913 PRDX5P30044 214 aa22.21■■□□□ 1.15
COL20A1-207ENST00000494913 RASGRF1Q13972 1273 aa22.21■■□□□ 1.15
COL20A1-207ENST00000494913 IFFO2Q5TF58 517 aa22.21■■□□□ 1.15
COL20A1-207ENST00000494913 APOBEC3HQ6NTF7 200 aaKnown RBP22.21■■□□□ 1.15
COL20A1-207ENST00000494913 TNS4Q8IZW8 715 aa22.21■■□□□ 1.15
COL20A1-207ENST00000494913 CACNB3P54284 484 aa22.2■■□□□ 1.14
COL20A1-207ENST00000494913 SALL1Q9NSC2 1324 aa22.19■■□□□ 1.14
COL20A1-207ENST00000494913 ZBTB22O15209 634 aa22.19■■□□□ 1.14
COL20A1-207ENST00000494913 CA12O43570 354 aa22.19■■□□□ 1.14
COL20A1-207ENST00000494913 TNNI2P48788 182 aa22.19■■□□□ 1.14
COL20A1-207ENST00000494913 DIXDC1Q155Q3 683 aa22.19■■□□□ 1.14
COL20A1-207ENST00000494913 LDLRAD1Q5T700 205 aa22.19■■□□□ 1.14
COL20A1-207ENST00000494913 CEP85Q6P2H3 762 aa22.19■■□□□ 1.14
COL20A1-207ENST00000494913 COG6Q9Y2V7 657 aa22.19■■□□□ 1.14
COL20A1-207ENST00000494913 ZGPATQ8N5A5 531 aaKnown RBP22.18■■□□□ 1.14
COL20A1-207ENST00000494913 CSRNP1Q96S65 589 aa22.18■■□□□ 1.14
COL20A1-207ENST00000494913 TMEM39BQ9GZU3 492 aa22.18■■□□□ 1.14
COL20A1-207ENST00000494913 TMOD2Q9NZR1 351 aa22.18■■□□□ 1.14
COL20A1-207ENST00000494913 SSC5DA1L4H1 1573 aa22.18■■□□□ 1.14
COL20A1-207ENST00000494913 TEPSINQ96N21 525 aa22.17■■□□□ 1.14
COL20A1-207ENST00000494913 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.17■■□□□ 1.14
COL20A1-207ENST00000494913 ABCF2Q9UG63 623 aa22.17■■□□□ 1.14
COL20A1-207ENST00000494913 NOP58Q9Y2X3 529 aaKnown RBP22.17■■□□□ 1.14
COL20A1-207ENST00000494913 DAGLAQ9Y4D2 1042 aa22.17■■□□□ 1.14
COL20A1-207ENST00000494913 MKRN3Q13064 507 aaKnown RBP22.16■■□□□ 1.14
COL20A1-207ENST00000494913 MAP3K11Q16584 847 aa22.16■■□□□ 1.14
COL20A1-207ENST00000494913 CDAN1Q8IWY9 1227 aa22.16■■□□□ 1.14
COL20A1-207ENST00000494913 GPR108Q9NPR9 543 aa22.16■■□□□ 1.14
COL20A1-207ENST00000494913 DDX19BQ9UMR2 479 aa22.16■■□□□ 1.14
COL20A1-207ENST00000494913 PDS5AQ29RF7 1337 aaKnown RBP22.16■■□□□ 1.14
COL20A1-207ENST00000494913 USP2O75604 605 aaPredicted RBP22.15■■□□□ 1.14
COL20A1-207ENST00000494913 TNNI3KQ59H18 835 aa22.15■■□□□ 1.14
COL20A1-207ENST00000494913 SLC10A4Q96EP9 437 aa22.15■■□□□ 1.14
COL20A1-207ENST00000494913 FPGT-TNNI3KV9GXZ4 949 aa22.15■■□□□ 1.14
COL20A1-207ENST00000494913 IREB2P48200 963 aaKnown RBP22.15■■□□□ 1.14
COL20A1-207ENST00000494913 REM2Q8IYK8 340 aaPredicted RBP22.15■■□□□ 1.14
COL20A1-207ENST00000494913 HMG20BQ9P0W2 317 aa22.15■■□□□ 1.14
COL20A1-207ENST00000494913 TRPA1O75762 1119 aa22.14■■□□□ 1.13
COL20A1-207ENST00000494913 FKBP1CQ5VVH2 108 aa22.14■■□□□ 1.13
COL20A1-207ENST00000494913 SPTY2D1Q68D10 685 aaPredicted RBP22.14■■□□□ 1.13
COL20A1-207ENST00000494913 CDC42EP5Q6NZY7 148 aa22.14■■□□□ 1.13
COL20A1-207ENST00000494913 PI16Q6UXB8 463 aa22.14■■□□□ 1.13
COL20A1-207ENST00000494913 SPATA5Q8NB90 893 aa22.14■■□□□ 1.13
COL20A1-207ENST00000494913 CLMNQ96JQ2 1002 aa22.14■■□□□ 1.13
COL20A1-207ENST00000494913 RNF186Q9NXI6 227 aa22.14■■□□□ 1.13
COL20A1-207ENST00000494913 ARID4AP29374 1257 aaPredicted RBP22.13■■□□□ 1.13
COL20A1-207ENST00000494913 FAM83AQ86UY5 434 aa22.13■■□□□ 1.13
COL20A1-207ENST00000494913 DZIP1Q86YF9 867 aaKnown RBP22.13■■□□□ 1.13
COL20A1-207ENST00000494913 ZBTB40Q9NUA8 1239 aa22.13■■□□□ 1.13
COL20A1-207ENST00000494913 UQCRFS1P1P0C7P4 283 aa22.12■■□□□ 1.13
COL20A1-207ENST00000494913 C20orf194Q5TEA3 1177 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms