RNA–Protein interactions for RNA: ENST00000494764.1

RAPGEF3-213, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-213ENST00000494764 PDE8BO95263 885 aa14.65□□□□□ -0.06
RAPGEF3-213ENST00000494764 RABL6Q3YEC7 729 aaPredicted RBP14.65□□□□□ -0.06
RAPGEF3-213ENST00000494764 TBC1D22AQ8WUA7 517 aa14.65□□□□□ -0.06
RAPGEF3-213ENST00000494764 ELP3Q9H9T3 547 aa14.65□□□□□ -0.06
RAPGEF3-213ENST00000494764 TRIM17Q9Y577 477 aa14.65□□□□□ -0.06
RAPGEF3-213ENST00000494764 MAP3K9P80192 1104 aa14.64□□□□□ -0.07
RAPGEF3-213ENST00000494764 OPTNQ96CV9 577 aa14.64□□□□□ -0.07
RAPGEF3-213ENST00000494764 ERO1AQ96HE7 468 aa14.64□□□□□ -0.07
RAPGEF3-213ENST00000494764 PTPRCP08575 1304 aa14.64□□□□□ -0.07
RAPGEF3-213ENST00000494764 GJA5P36382 358 aa14.63□□□□□ -0.07
RAPGEF3-213ENST00000494764 BCAMP50895 628 aa14.63□□□□□ -0.07
RAPGEF3-213ENST00000494764 HDLBPQ00341 1268 aaKnown RBP14.63□□□□□ -0.07
RAPGEF3-213ENST00000494764 OTOP1Q7RTM1 612 aa14.63□□□□□ -0.07
RAPGEF3-213ENST00000494764 ANKRD44Q8N8A2 993 aa14.63□□□□□ -0.07
RAPGEF3-213ENST00000494764 TEPSINQ96N21 525 aa14.63□□□□□ -0.07
RAPGEF3-213ENST00000494764 MRIQ9BWK5 157 aa14.63□□□□□ -0.07
RAPGEF3-213ENST00000494764 TMEM39BQ9GZU3 492 aa14.63□□□□□ -0.07
RAPGEF3-213ENST00000494764 ZNF521Q96K83 1311 aa14.63□□□□□ -0.07
RAPGEF3-213ENST00000494764 TESPA1A2RU30 521 aaPredicted RBP14.62□□□□□ -0.07
RAPGEF3-213ENST00000494764 E9PSI1 815 aa14.62□□□□□ -0.07
RAPGEF3-213ENST00000494764 IFIT1P09914 478 aaKnown RBP14.62□□□□□ -0.07
RAPGEF3-213ENST00000494764 SP3Q02447 781 aa14.62□□□□□ -0.07
RAPGEF3-213ENST00000494764 CRHR2Q13324 411 aa14.62□□□□□ -0.07
RAPGEF3-213ENST00000494764 GRIK5Q16478 980 aa14.62□□□□□ -0.07
RAPGEF3-213ENST00000494764 KLHDC4Q8TBB5 520 aa14.62□□□□□ -0.07
RAPGEF3-213ENST00000494764 SSH1Q8WYL5 1049 aa14.62□□□□□ -0.07
RAPGEF3-213ENST00000494764 TEKT1Q969V4 418 aa14.62□□□□□ -0.07
RAPGEF3-213ENST00000494764 PTPN18Q99952 460 aa14.62□□□□□ -0.07
RAPGEF3-213ENST00000494764 USP44Q9H0E7 712 aa14.62□□□□□ -0.07
RAPGEF3-213ENST00000494764 CSADQ9Y600 493 aa14.62□□□□□ -0.07
RAPGEF3-213ENST00000494764 INTS3Q68E01 1043 aaKnown RBP14.61□□□□□ -0.07
RAPGEF3-213ENST00000494764 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.61□□□□□ -0.07
RAPGEF3-213ENST00000494764 CD99L2Q8TCZ2 262 aa14.61□□□□□ -0.07
RAPGEF3-213ENST00000494764 EFCC1Q9HA90 598 aa14.61□□□□□ -0.07
RAPGEF3-213ENST00000494764 TMOD2Q9NZR1 351 aa14.61□□□□□ -0.07
RAPGEF3-213ENST00000494764 GTF2A2P52657 109 aa14.6□□□□□ -0.07
RAPGEF3-213ENST00000494764 CACNB3P54284 484 aa14.6□□□□□ -0.07
RAPGEF3-213ENST00000494764 ARHGEF6Q15052 776 aa14.6□□□□□ -0.07
RAPGEF3-213ENST00000494764 PRPF38BQ5VTL8 546 aaKnown RBP14.6□□□□□ -0.07
RAPGEF3-213ENST00000494764 CDAN1Q8IWY9 1227 aa14.6□□□□□ -0.07
RAPGEF3-213ENST00000494764 VGLL2Q8N8G2 317 aa14.6□□□□□ -0.07
RAPGEF3-213ENST00000494764 HOOK2Q96ED9 719 aa14.6□□□□□ -0.07
RAPGEF3-213ENST00000494764 MS4A4AQ96JQ5 239 aa14.6□□□□□ -0.07
RAPGEF3-213ENST00000494764 ZFYVE28Q9HCC9 887 aa14.6□□□□□ -0.07
RAPGEF3-213ENST00000494764 PTPN22Q9Y2R2 807 aa14.6□□□□□ -0.07
RAPGEF3-213ENST00000494764 SUGT1Q9Y2Z0 365 aa14.6□□□□□ -0.07
RAPGEF3-213ENST00000494764 LAMB1P07942 1786 aa14.6□□□□□ -0.07
RAPGEF3-213ENST00000494764 CCL15-CCL14A0A0B4J2E2 113 aa14.59□□□□□ -0.07
RAPGEF3-213ENST00000494764 WDHD1O75717 1129 aaPredicted RBP14.59□□□□□ -0.07
RAPGEF3-213ENST00000494764 SLFN5Q08AF3 891 aa14.59□□□□□ -0.07
RAPGEF3-213ENST00000494764 VGLL4Q14135 290 aa14.59□□□□□ -0.07
RAPGEF3-213ENST00000494764 PUM3Q15397 648 aaKnown RBP14.59□□□□□ -0.07
RAPGEF3-213ENST00000494764 CCL15Q16663 113 aa14.59□□□□□ -0.07
RAPGEF3-213ENST00000494764 ALDH1L2Q3SY69 923 aa14.59□□□□□ -0.07
RAPGEF3-213ENST00000494764 CNKSR2Q8WXI2 1034 aa14.59□□□□□ -0.07
RAPGEF3-213ENST00000494764 ZDHHC15Q96MV8 337 aa14.59□□□□□ -0.07
RAPGEF3-213ENST00000494764 CENPFP49454 3210 aa14.59□□□□□ -0.07
RAPGEF3-213ENST00000494764 MAST3O60307 1309 aa14.59□□□□□ -0.07
RAPGEF3-213ENST00000494764 EYA2O00167 538 aa14.58□□□□□ -0.08
RAPGEF3-213ENST00000494764 SLC5A1P13866 664 aa14.58□□□□□ -0.08
RAPGEF3-213ENST00000494764 FGFR2P21802 821 aa14.58□□□□□ -0.08
RAPGEF3-213ENST00000494764 TAF1CQ15572 869 aaPredicted RBP14.58□□□□□ -0.08
RAPGEF3-213ENST00000494764 FKBP1CQ5VVH2 108 aa14.58□□□□□ -0.08
RAPGEF3-213ENST00000494764 HHIPL2Q6UWX4 724 aa14.58□□□□□ -0.08
RAPGEF3-213ENST00000494764 FAM83AQ86UY5 434 aa14.58□□□□□ -0.08
RAPGEF3-213ENST00000494764 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.58□□□□□ -0.08
RAPGEF3-213ENST00000494764 WDR66Q8TBY9 1149 aa14.58□□□□□ -0.08
RAPGEF3-213ENST00000494764 BRI3BPQ8WY22 251 aa14.58□□□□□ -0.08
RAPGEF3-213ENST00000494764 OTUD5Q96G74 571 aa14.58□□□□□ -0.08
RAPGEF3-213ENST00000494764 AK9Q5TCS8 1911 aa14.58□□□□□ -0.08
RAPGEF3-213ENST00000494764 ARAP2Q8WZ64 1704 aa14.58□□□□□ -0.08
RAPGEF3-213ENST00000494764 OTOFQ9HC10 1997 aa14.57□□□□□ -0.08
RAPGEF3-213ENST00000494764 DCAF15Q66K64 600 aa14.57□□□□□ -0.08
RAPGEF3-213ENST00000494764 APOBEC3HQ6NTF7 200 aaKnown RBP14.57□□□□□ -0.08
RAPGEF3-213ENST00000494764 LPIN2Q92539 896 aa14.57□□□□□ -0.08
RAPGEF3-213ENST00000494764 KIF16BQ96L93 1317 aa14.57□□□□□ -0.08
RAPGEF3-213ENST00000494764 CETPP11597 493 aa14.56□□□□□ -0.08
RAPGEF3-213ENST00000494764 RFX5P48382 616 aaPredicted RBP14.56□□□□□ -0.08
RAPGEF3-213ENST00000494764 ERO1BQ86YB8 467 aa14.56□□□□□ -0.08
RAPGEF3-213ENST00000494764 ZKSCAN4Q969J2 545 aaPredicted RBP14.56□□□□□ -0.08
RAPGEF3-213ENST00000494764 WRNIP1Q96S55 665 aa14.56□□□□□ -0.08
RAPGEF3-213ENST00000494764 SMC4Q9NTJ3 1288 aa14.56□□□□□ -0.08
RAPGEF3-213ENST00000494764 SPDYE5A6NIY4 337 aa14.55□□□□□ -0.08
RAPGEF3-213ENST00000494764 UBTFL1P0CB47 393 aaPredicted RBP14.55□□□□□ -0.08
RAPGEF3-213ENST00000494764 MIGA2Q7L4E1 593 aa14.55□□□□□ -0.08
RAPGEF3-213ENST00000494764 NBPF11Q86T75 865 aa14.55□□□□□ -0.08
RAPGEF3-213ENST00000494764 FAM43AQ8N2R8 423 aa14.55□□□□□ -0.08
RAPGEF3-213ENST00000494764 CDCA7LQ96GN5 454 aa14.55□□□□□ -0.08
RAPGEF3-213ENST00000494764 TMEM106CQ9BVX2 250 aa14.55□□□□□ -0.08
RAPGEF3-213ENST00000494764 ZNF341Q9BYN7 854 aa14.55□□□□□ -0.08
RAPGEF3-213ENST00000494764 GNL3LQ9NVN8 582 aaKnown RBP14.55□□□□□ -0.08
RAPGEF3-213ENST00000494764 CEP126Q9P2H0 1117 aa14.55□□□□□ -0.08
RAPGEF3-213ENST00000494764 HDAC5Q9UQL6 1122 aa14.55□□□□□ -0.08
RAPGEF3-213ENST00000494764 MYH13Q9UKX3 1938 aa14.54□□□□□ -0.08
RAPGEF3-213ENST00000494764 HTTP42858 3142 aa14.54□□□□□ -0.08
RAPGEF3-213ENST00000494764 POTEFA5A3E0 1075 aa14.54□□□□□ -0.08
RAPGEF3-213ENST00000494764 SNAPC2Q13487 334 aa14.54□□□□□ -0.08
RAPGEF3-213ENST00000494764 KIF22Q14807 665 aa14.54□□□□□ -0.08
RAPGEF3-213ENST00000494764 ATG9AQ7Z3C6 839 aa14.54□□□□□ -0.08
RAPGEF3-213ENST00000494764 FAM151AQ8WW52 585 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms