RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 PTPN22Q9Y2R2 807 aa18.45■□□□□ 0.54
PCCB-219ENST00000494742 CRKP46108 304 aa18.44■□□□□ 0.54
PCCB-219ENST00000494742 SP3Q02447 781 aa18.44■□□□□ 0.54
PCCB-219ENST00000494742 RABL6Q3YEC7 729 aaPredicted RBP18.44■□□□□ 0.54
PCCB-219ENST00000494742 FBXO33Q7Z6M2 555 aa18.44■□□□□ 0.54
PCCB-219ENST00000494742 SUCLG2Q96I99 432 aa18.44■□□□□ 0.54
PCCB-219ENST00000494742 PUS3Q9BZE2 481 aaKnown RBP18.44■□□□□ 0.54
PCCB-219ENST00000494742 NBPF7P0C2Y1 421 aaPredicted RBP18.43■□□□□ 0.54
PCCB-219ENST00000494742 ARHGEF6Q15052 776 aa18.43■□□□□ 0.54
PCCB-219ENST00000494742 CAVIN4Q5BKX8 364 aa18.43■□□□□ 0.54
PCCB-219ENST00000494742 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.43■□□□□ 0.54
PCCB-219ENST00000494742 VPS37DQ86XT2 251 aa18.43■□□□□ 0.54
PCCB-219ENST00000494742 GCC1Q96CN9 775 aa18.43■□□□□ 0.54
PCCB-219ENST00000494742 MS4A4AQ96JQ5 239 aa18.43■□□□□ 0.54
PCCB-219ENST00000494742 MRIQ9BWK5 157 aa18.43■□□□□ 0.54
PCCB-219ENST00000494742 ELP3Q9H9T3 547 aa18.43■□□□□ 0.54
PCCB-219ENST00000494742 EFCC1Q9HA90 598 aa18.43■□□□□ 0.54
PCCB-219ENST00000494742 GTF2A2P52657 109 aa18.42■□□□□ 0.54
PCCB-219ENST00000494742 MAP3K9P80192 1104 aa18.42■□□□□ 0.54
PCCB-219ENST00000494742 CD99L2Q8TCZ2 262 aa18.42■□□□□ 0.54
PCCB-219ENST00000494742 ARMC5Q96C12 935 aa18.42■□□□□ 0.54
PCCB-219ENST00000494742 HTTP42858 3142 aa18.41■□□□□ 0.54
PCCB-219ENST00000494742 TCP10L2B9ZVM9 353 aa18.41■□□□□ 0.54
PCCB-219ENST00000494742 VGLL4Q14135 290 aa18.41■□□□□ 0.54
PCCB-219ENST00000494742 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.41■□□□□ 0.54
PCCB-219ENST00000494742 HOOK2Q96ED9 719 aa18.41■□□□□ 0.54
PCCB-219ENST00000494742 TMEM39BQ9GZU3 492 aa18.41■□□□□ 0.54
PCCB-219ENST00000494742 BICC1Q9H694 974 aaKnown RBP18.41■□□□□ 0.54
PCCB-219ENST00000494742 SUGT1Q9Y2Z0 365 aa18.41■□□□□ 0.54
PCCB-219ENST00000494742 CSADQ9Y600 493 aa18.41■□□□□ 0.54
PCCB-219ENST00000494742 KIF16BQ96L93 1317 aa18.41■□□□□ 0.54
PCCB-219ENST00000494742 PDE8BO95263 885 aa18.4■□□□□ 0.54
PCCB-219ENST00000494742 FKBP1CQ5VVH2 108 aa18.4■□□□□ 0.54
PCCB-219ENST00000494742 TEKT1Q969V4 418 aa18.4■□□□□ 0.54
PCCB-219ENST00000494742 ZFYVE28Q9HCC9 887 aa18.4■□□□□ 0.54
PCCB-219ENST00000494742 MAST3O60307 1309 aa18.4■□□□□ 0.54
PCCB-219ENST00000494742 POTEFA5A3E0 1075 aa18.39■□□□□ 0.53
PCCB-219ENST00000494742 FRAT2O75474 233 aaPredicted RBP18.39■□□□□ 0.53
PCCB-219ENST00000494742 WDHD1O75717 1129 aaPredicted RBP18.39■□□□□ 0.53
PCCB-219ENST00000494742 METTL24Q5JXM2 366 aa18.39■□□□□ 0.53
PCCB-219ENST00000494742 FAM83AQ86UY5 434 aa18.39■□□□□ 0.53
PCCB-219ENST00000494742 VGLL2Q8N8G2 317 aa18.39■□□□□ 0.53
PCCB-219ENST00000494742 BRI3BPQ8WY22 251 aa18.39■□□□□ 0.53
PCCB-219ENST00000494742 ZDHHC15Q96MV8 337 aa18.39■□□□□ 0.53
PCCB-219ENST00000494742 ZCCHC17Q9NP64 241 aaKnown RBP18.39■□□□□ 0.53
PCCB-219ENST00000494742 PTPRCP08575 1304 aa18.39■□□□□ 0.53
PCCB-219ENST00000494742 CCL15-CCL14A0A0B4J2E2 113 aa18.38■□□□□ 0.53
PCCB-219ENST00000494742 SPDYE5A6NIY4 337 aa18.38■□□□□ 0.53
PCCB-219ENST00000494742 TAF1CQ15572 869 aaPredicted RBP18.38■□□□□ 0.53
PCCB-219ENST00000494742 CCL15Q16663 113 aa18.38■□□□□ 0.53
PCCB-219ENST00000494742 LRRC24Q50LG9 513 aa18.38■□□□□ 0.53
PCCB-219ENST00000494742 CDAN1Q8IWY9 1227 aa18.38■□□□□ 0.53
PCCB-219ENST00000494742 ANKRD44Q8N8A2 993 aa18.38■□□□□ 0.53
PCCB-219ENST00000494742 TMOD2Q9NZR1 351 aa18.38■□□□□ 0.53
PCCB-219ENST00000494742 CHAF1AQ13111 956 aaPredicted RBP18.37■□□□□ 0.53
PCCB-219ENST00000494742 GRIK5Q16478 980 aa18.37■□□□□ 0.53
PCCB-219ENST00000494742 ERO1BQ86YB8 467 aa18.37■□□□□ 0.53
PCCB-219ENST00000494742 OTUD5Q96G74 571 aa18.37■□□□□ 0.53
PCCB-219ENST00000494742 IQSEC3Q9UPP2 1182 aaPredicted RBP18.37■□□□□ 0.53
PCCB-219ENST00000494742 ZNF521Q96K83 1311 aa18.37■□□□□ 0.53
PCCB-219ENST00000494742 CETPP11597 493 aa18.36■□□□□ 0.53
PCCB-219ENST00000494742 HHIPL2Q6UWX4 724 aa18.36■□□□□ 0.53
PCCB-219ENST00000494742 NBPF11Q86T75 865 aa18.36■□□□□ 0.53
PCCB-219ENST00000494742 FAM9BQ8IZU0 186 aa18.36■□□□□ 0.53
PCCB-219ENST00000494742 MRPL50Q8N5N7 158 aaKnown RBP18.36■□□□□ 0.53
PCCB-219ENST00000494742 CNKSR2Q8WXI2 1034 aa18.36■□□□□ 0.53
PCCB-219ENST00000494742 RPAP1Q9BWH6 1393 aaPredicted RBP18.36■□□□□ 0.53
PCCB-219ENST00000494742 IFIT1P09914 478 aaKnown RBP18.35■□□□□ 0.53
PCCB-219ENST00000494742 PUM3Q15397 648 aaKnown RBP18.35■□□□□ 0.53
PCCB-219ENST00000494742 DCAF15Q66K64 600 aa18.35■□□□□ 0.53
PCCB-219ENST00000494742 FAM43AQ8N2R8 423 aa18.35■□□□□ 0.53
PCCB-219ENST00000494742 ZNF333Q96JL9 665 aa18.35■□□□□ 0.53
PCCB-219ENST00000494742 TMEM106CQ9BVX2 250 aa18.35■□□□□ 0.53
PCCB-219ENST00000494742 MYH13Q9UKX3 1938 aa18.34■□□□□ 0.53
PCCB-219ENST00000494742 TLR2O60603 784 aa18.34■□□□□ 0.53
PCCB-219ENST00000494742 GNRH1P01148 92 aa18.34■□□□□ 0.53
PCCB-219ENST00000494742 FGFR2P21802 821 aa18.34■□□□□ 0.53
PCCB-219ENST00000494742 BCAMP50895 628 aa18.34■□□□□ 0.53
PCCB-219ENST00000494742 CAP1Q01518 475 aa18.34■□□□□ 0.53
PCCB-219ENST00000494742 SNAPC2Q13487 334 aa18.34■□□□□ 0.53
PCCB-219ENST00000494742 APOBEC3HQ6NTF7 200 aaKnown RBP18.34■□□□□ 0.53
PCCB-219ENST00000494742 WRNIP1Q96S55 665 aa18.34■□□□□ 0.53
PCCB-219ENST00000494742 USP44Q9H0E7 712 aa18.34■□□□□ 0.53
PCCB-219ENST00000494742 SNCAIPQ9Y6H5 919 aa18.34■□□□□ 0.53
PCCB-219ENST00000494742 CENPFP49454 3210 aa18.34■□□□□ 0.53
PCCB-219ENST00000494742 CACNB3P54284 484 aa18.33■□□□□ 0.52
PCCB-219ENST00000494742 PPIL2Q13356 520 aa18.33■□□□□ 0.52
PCCB-219ENST00000494742 SLC9C1Q4G0N8 1177 aa18.33■□□□□ 0.52
PCCB-219ENST00000494742 WDR66Q8TBY9 1149 aa18.33■□□□□ 0.52
PCCB-219ENST00000494742 KIAA0100Q14667 2235 aaKnown RBP18.33■□□□□ 0.52
PCCB-219ENST00000494742 ZNF316A6NFI3 1004 aaPredicted RBP18.32■□□□□ 0.52
PCCB-219ENST00000494742 EN2P19622 333 aaPredicted RBP18.32■□□□□ 0.52
PCCB-219ENST00000494742 ZEB1P37275 1124 aaPredicted RBP18.32■□□□□ 0.52
PCCB-219ENST00000494742 PPATQ06203 517 aa18.32■□□□□ 0.52
PCCB-219ENST00000494742 KIF22Q14807 665 aa18.32■□□□□ 0.52
PCCB-219ENST00000494742 LPIN2Q92539 896 aa18.32■□□□□ 0.52
PCCB-219ENST00000494742 E9PSI1 815 aa18.31■□□□□ 0.52
PCCB-219ENST00000494742 EYA2O00167 538 aa18.31■□□□□ 0.52
PCCB-219ENST00000494742 IRF6O14896 467 aa18.31■□□□□ 0.52
PCCB-219ENST00000494742 SLC5A1P13866 664 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms