RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 VCPKMTQ9H867 229 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 ABCB6Q9NP58 842 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 HMG20BQ9P0W2 317 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 HPCAL4Q9UM19 191 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 SALL1Q9NSC2 1324 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 USP54Q70EL1 1684 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 RNF40O75150 1001 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 PRPHP41219 470 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 IRAK1P51617 712 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 PIP4K2BP78356 416 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 HOMER1Q86YM7 354 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 APLFQ8IW19 511 aaPredicted RBP5.5□□□□□ -1.53
PRKD3-210ENST00000494667 CNTROBQ8N137 903 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 MAP4K1Q92918 833 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 JPH4Q96JJ6 628 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 RPGRIP1Q96KN7 1286 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 PANX2Q96RD6 677 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 KIAA1468Q9P260 1216 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 H7C1W4 665 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 COQ9O75208 318 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 SCP2P22307 547 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 USPL1Q5W0Q7 1092 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 ZNF572Q7Z3I7 529 aaPredicted RBP5.5□□□□□ -1.53
PRKD3-210ENST00000494667 DHX58Q96C10 678 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 BAG1Q99933 345 aaPredicted RBP5.5□□□□□ -1.53
PRKD3-210ENST00000494667 PLCD4Q9BRC7 762 aa5.5□□□□□ -1.53
PRKD3-210ENST00000494667 EDC4Q6P2E9 1401 aaKnown RBP5.49□□□□□ -1.53
PRKD3-210ENST00000494667 BCL9LQ86UU0 1499 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 H0YHG0 523 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 PDLIM1O00151 329 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 HIP1O00291 1037 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 N4BP1O75113 896 aaKnown RBP5.49□□□□□ -1.53
PRKD3-210ENST00000494667 SARNPP82979 210 aaKnown RBP5.49□□□□□ -1.53
PRKD3-210ENST00000494667 AMPD2Q01433 879 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 DCTN1Q14203 1278 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 PPP2R5AQ15172 486 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 ADALQ6DHV7 355 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 FBXL16Q8N461 479 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 CCDC26Q8TAB7 109 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 ACTR5Q9H9F9 607 aaPredicted RBP5.49□□□□□ -1.53
PRKD3-210ENST00000494667 IFNKQ9P0W0 207 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 STAG3Q9UJ98 1225 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 A0A1B0GUA9 196 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 VPS37CA5D8V6 355 aaPredicted RBP5.49□□□□□ -1.53
PRKD3-210ENST00000494667 LRRIQ3A6PVS8 624 aaPredicted RBP5.49□□□□□ -1.53
PRKD3-210ENST00000494667 MEFVO15553 781 aaPredicted RBP5.49□□□□□ -1.53
PRKD3-210ENST00000494667 RPS6KB1P23443 525 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 TNFRSF8P28908 595 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 FANCCQ00597 558 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 ACTN3Q08043 901 aaPredicted RBP5.49□□□□□ -1.53
PRKD3-210ENST00000494667 IFFO1Q0D2I5 559 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 SEMA3FQ13275 785 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 PDCD2Q16342 344 aaPredicted RBP5.49□□□□□ -1.53
PRKD3-210ENST00000494667 FOXD4L6Q3SYB3 417 aaPredicted RBP5.49□□□□□ -1.53
PRKD3-210ENST00000494667 FOXD4L3Q6VB84 417 aaPredicted RBP5.49□□□□□ -1.53
PRKD3-210ENST00000494667 TTLL7Q6ZT98 887 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 P3H4Q92791 437 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 CLIC6Q96NY7 704 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.49□□□□□ -1.534e-6■□□□□ 8.4
PRKD3-210ENST00000494667 RTEL1Q9NZ71 1219 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 CARMIL3Q8ND23 1372 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 GOLGA8KD6RF30 607 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 PFKFB2O60825 505 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 ITIH3Q06033 890 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 TOB2Q14106 344 aaPredicted RBP5.49□□□□□ -1.53
PRKD3-210ENST00000494667 C6orf89Q6UWU4 347 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 CWC27Q6UX04 472 aaKnown RBP5.49□□□□□ -1.53
PRKD3-210ENST00000494667 CCDC73Q6ZRK6 1079 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 ARMC2Q8NEN0 867 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 COG1Q8WTW3 980 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 HOOK2Q96ED9 719 aa5.49□□□□□ -1.53
PRKD3-210ENST00000494667 TOPAZ1Q8N9V7 1692 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 NPHP1O15259 732 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 KINO60870 393 aaKnown RBP5.48□□□□□ -1.53
PRKD3-210ENST00000494667 IFIT2P09913 472 aaKnown RBP5.48□□□□□ -1.53
PRKD3-210ENST00000494667 NF2P35240 595 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 PDIA5Q14554 519 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 KRT24Q2M2I5 525 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 FILIP1LQ4L180 1135 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 LARP1Q6PKG0 1096 aaKnown RBP5.48□□□□□ -1.53
PRKD3-210ENST00000494667 MICALCLQ6ZW33 695 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 IQCA1Q86XH1 822 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 PHACTR3Q96KR7 559 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 ZNF396Q96N95 335 aaPredicted RBP5.48□□□□□ -1.53
PRKD3-210ENST00000494667 AGXT2Q9BYV1 514 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 WDR17Q8IZU2 1322 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 RASGRP2Q7LDG7 609 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 IQSEC3Q9UPP2 1182 aaPredicted RBP5.48□□□□□ -1.53
PRKD3-210ENST00000494667 C4AP0C0L4 1744 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 C4BP0C0L5 1744 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 AGPSO00116 658 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 IPO7O95373 1038 aaKnown RBP5.48□□□□□ -1.53
PRKD3-210ENST00000494667 YEATS4O95619 227 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 VSNL1P62760 191 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 LACTB2Q53H82 288 aaPredicted RBP5.48□□□□□ -1.53
PRKD3-210ENST00000494667 CRELD2Q6UXH1 353 aaPredicted RBP5.48□□□□□ -1.53
PRKD3-210ENST00000494667 TC2NQ8N9U0 490 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 MRPS27Q92552 414 aaKnown RBP5.48□□□□□ -1.53
PRKD3-210ENST00000494667 ANKRD27Q96NW4 1050 aa5.48□□□□□ -1.53
PRKD3-210ENST00000494667 NPATQ14207 1427 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms