RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 ZBED9Q6R2W3 1325 aa19.4■□□□□ 0.7
LIMS2-216ENST00000494613 RASA3Q14644 834 aa19.39■□□□□ 0.69
LIMS2-216ENST00000494613 SUPT20HL1Q3ZLR7 823 aa19.39■□□□□ 0.69
LIMS2-216ENST00000494613 LDLRAD1Q5T700 205 aa19.39■□□□□ 0.69
LIMS2-216ENST00000494613 NBPF12Q5TAG4 269 aaPredicted RBP19.39■□□□□ 0.69
LIMS2-216ENST00000494613 FZD1Q9UP38 647 aa19.39■□□□□ 0.69
LIMS2-216ENST00000494613 PPP2R3BQ9Y5P8 575 aa19.39■□□□□ 0.69
LIMS2-216ENST00000494613 SPDYE2Q495Y8 402 aa19.38■□□□□ 0.69
LIMS2-216ENST00000494613 WDR66Q8TBY9 1149 aa19.38■□□□□ 0.69
LIMS2-216ENST00000494613 ANGEL1Q9UNK9 670 aaKnown RBP19.38■□□□□ 0.69
LIMS2-216ENST00000494613 SUGT1Q9Y2Z0 365 aa19.38■□□□□ 0.69
LIMS2-216ENST00000494613 PNMA6EA0A0J9YXQ4 647 aa19.37■□□□□ 0.69
LIMS2-216ENST00000494613 TFCP2Q12800 502 aa19.37■□□□□ 0.69
LIMS2-216ENST00000494613 REM2Q8IYK8 340 aaPredicted RBP19.37■□□□□ 0.69
LIMS2-216ENST00000494613 TEKT1Q969V4 418 aa19.37■□□□□ 0.69
LIMS2-216ENST00000494613 GNL3LQ9NVN8 582 aaKnown RBP19.37■□□□□ 0.69
LIMS2-216ENST00000494613 RNF186Q9NXI6 227 aa19.37■□□□□ 0.69
LIMS2-216ENST00000494613 PPP1R12BO60237 982 aaPredicted RBP19.36■□□□□ 0.69
LIMS2-216ENST00000494613 USP2O75604 605 aaPredicted RBP19.36■□□□□ 0.69
LIMS2-216ENST00000494613 TRPA1O75762 1119 aa19.36■□□□□ 0.69
LIMS2-216ENST00000494613 ADORA1P30542 326 aa19.36■□□□□ 0.69
LIMS2-216ENST00000494613 PHKA1P46020 1223 aa19.36■□□□□ 0.69
LIMS2-216ENST00000494613 SLC10A4Q96EP9 437 aa19.36■□□□□ 0.69
LIMS2-216ENST00000494613 THSD7BQ9C0I4 1608 aa19.36■□□□□ 0.69
LIMS2-216ENST00000494613 TCP10L2B9ZVM9 353 aa19.35■□□□□ 0.69
LIMS2-216ENST00000494613 ZBTB7BO15156 539 aaPredicted RBP19.35■□□□□ 0.69
LIMS2-216ENST00000494613 CAPN15O75808 1086 aa19.35■□□□□ 0.69
LIMS2-216ENST00000494613 RLBP1P12271 317 aa19.35■□□□□ 0.69
LIMS2-216ENST00000494613 ATP8B2P98198 1209 aa19.35■□□□□ 0.69
LIMS2-216ENST00000494613 MAP3K11Q16584 847 aa19.35■□□□□ 0.69
LIMS2-216ENST00000494613 APOBEC3HQ6NTF7 200 aaKnown RBP19.35■□□□□ 0.69
LIMS2-216ENST00000494613 HHIPL2Q6UWX4 724 aa19.35■□□□□ 0.69
LIMS2-216ENST00000494613 ZDHHC15Q96MV8 337 aa19.35■□□□□ 0.69
LIMS2-216ENST00000494613 AKAP2Q9Y2D5 859 aa19.35■□□□□ 0.69
LIMS2-216ENST00000494613 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.35■□□□□ 0.69
LIMS2-216ENST00000494613 G3BP1Q13283 466 aaKnown RBP eCLIP19.34■□□□□ 0.69
LIMS2-216ENST00000494613 TNFAIP1Q13829 316 aa19.34■□□□□ 0.69
LIMS2-216ENST00000494613 CCDC102BQ68D86 513 aa19.34■□□□□ 0.69
LIMS2-216ENST00000494613 FTSJ3Q8IY81 847 aaKnown RBP19.34■□□□□ 0.69
LIMS2-216ENST00000494613 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.34■□□□□ 0.69
LIMS2-216ENST00000494613 DENND2AQ9ULE3 1009 aa19.34■□□□□ 0.69
LIMS2-216ENST00000494613 PAPPA2Q9BXP8 1791 aa19.34■□□□□ 0.69
LIMS2-216ENST00000494613 A0A1B0GUL7 405 aa19.33■□□□□ 0.68
LIMS2-216ENST00000494613 TM4SF4P48230 202 aa19.33■□□□□ 0.68
LIMS2-216ENST00000494613 MKRN3Q13064 507 aaKnown RBP19.33■□□□□ 0.68
LIMS2-216ENST00000494613 XAGE2Q96GT9 111 aa19.33■□□□□ 0.68
LIMS2-216ENST00000494613 TEPSINQ96N21 525 aa19.33■□□□□ 0.68
LIMS2-216ENST00000494613 NEUROD6Q96NK8 337 aa19.33■□□□□ 0.68
LIMS2-216ENST00000494613 SEMA3EO15041 775 aa19.32■□□□□ 0.68
LIMS2-216ENST00000494613 TNNI2P48788 182 aa19.32■□□□□ 0.68
LIMS2-216ENST00000494613 CACNB3P54284 484 aa19.32■□□□□ 0.68
LIMS2-216ENST00000494613 TMEM39BQ9GZU3 492 aa19.32■□□□□ 0.68
LIMS2-216ENST00000494613 SAGE1Q9NXZ1 904 aa19.32■□□□□ 0.68
LIMS2-216ENST00000494613 COL1A1P02452 1464 aaPredicted RBP19.32■□□□□ 0.68
LIMS2-216ENST00000494613 MAST3O60307 1309 aa19.31■□□□□ 0.68
LIMS2-216ENST00000494613 UNCXA6NJT0 531 aa19.31■□□□□ 0.68
LIMS2-216ENST00000494613 ZBTB22O15209 634 aa19.31■□□□□ 0.68
LIMS2-216ENST00000494613 LDHBP07195 334 aaKnown RBP19.31■□□□□ 0.68
LIMS2-216ENST00000494613 POLA2Q14181 598 aa19.31■□□□□ 0.68
LIMS2-216ENST00000494613 SPRYD7Q5W111 196 aa19.31■□□□□ 0.68
LIMS2-216ENST00000494613 ITPRIPQ8IWB1 547 aa19.31■□□□□ 0.68
LIMS2-216ENST00000494613 CLMNQ96JQ2 1002 aa19.31■□□□□ 0.68
LIMS2-216ENST00000494613 PRDX5P30044 214 aa19.3■□□□□ 0.68
LIMS2-216ENST00000494613 IREB2P48200 963 aaKnown RBP19.3■□□□□ 0.68
LIMS2-216ENST00000494613 CDAN1Q8IWY9 1227 aa19.3■□□□□ 0.68
LIMS2-216ENST00000494613 SSH3Q8TE77 659 aa19.3■□□□□ 0.68
LIMS2-216ENST00000494613 C1orf115Q9H7X2 142 aa19.3■□□□□ 0.68
LIMS2-216ENST00000494613 DIXDC1Q155Q3 683 aa19.29■□□□□ 0.68
LIMS2-216ENST00000494613 FKBP1CQ5VVH2 108 aa19.29■□□□□ 0.68
LIMS2-216ENST00000494613 PANK1Q8TE04 598 aa19.29■□□□□ 0.68
LIMS2-216ENST00000494613 SALL1Q9NSC2 1324 aa19.28■□□□□ 0.68
LIMS2-216ENST00000494613 RASGRF1Q13972 1273 aa19.28■□□□□ 0.68
LIMS2-216ENST00000494613 MVPQ14764 893 aaKnown RBP19.28■□□□□ 0.68
LIMS2-216ENST00000494613 GORABQ5T7V8 394 aa19.28■□□□□ 0.68
LIMS2-216ENST00000494613 FAM83AQ86UY5 434 aa19.28■□□□□ 0.68
LIMS2-216ENST00000494613 ANKRD13AQ8IZ07 590 aa19.28■□□□□ 0.68
LIMS2-216ENST00000494613 TMOD2Q9NZR1 351 aa19.28■□□□□ 0.68
LIMS2-216ENST00000494613 DAGLAQ9Y4D2 1042 aa19.28■□□□□ 0.68
LIMS2-216ENST00000494613 SSC5DA1L4H1 1573 aa19.27■□□□□ 0.68
LIMS2-216ENST00000494613 SURF6O75683 361 aaKnown RBP19.27■□□□□ 0.68
LIMS2-216ENST00000494613 TBC1D8O95759 1140 aa19.27■□□□□ 0.68
LIMS2-216ENST00000494613 INHBEP58166 350 aa19.27■□□□□ 0.68
LIMS2-216ENST00000494613 CDC42EP5Q6NZY7 148 aa19.27■□□□□ 0.68
LIMS2-216ENST00000494613 ZGPATQ8N5A5 531 aaKnown RBP19.27■□□□□ 0.68
LIMS2-216ENST00000494613 MAP3K9P80192 1104 aa19.26■□□□□ 0.67
LIMS2-216ENST00000494613 WNK4Q96J92 1243 aa19.26■□□□□ 0.67
LIMS2-216ENST00000494613 USP40Q9NVE5 1235 aa19.26■□□□□ 0.67
LIMS2-216ENST00000494613 ABCF2Q9UG63 623 aa19.26■□□□□ 0.67
LIMS2-216ENST00000494613 CASP8AP2Q9UKL3 1982 aa19.26■□□□□ 0.67
LIMS2-216ENST00000494613 ECM29Q5VYK3 1845 aa19.25■□□□□ 0.67
LIMS2-216ENST00000494613 SREBF2Q12772 1141 aa19.25■□□□□ 0.67
LIMS2-216ENST00000494613 SPTY2D1Q68D10 685 aaPredicted RBP19.25■□□□□ 0.67
LIMS2-216ENST00000494613 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.25■□□□□ 0.67
LIMS2-216ENST00000494613 ABHD8Q96I13 439 aa19.25■□□□□ 0.67
LIMS2-216ENST00000494613 HMG20BQ9P0W2 317 aa19.25■□□□□ 0.67
LIMS2-216ENST00000494613 NOP58Q9Y2X3 529 aaKnown RBP19.25■□□□□ 0.67
LIMS2-216ENST00000494613 MANSC4A6NHS7 340 aaPredicted RBP19.24■□□□□ 0.67
LIMS2-216ENST00000494613 ZBTB48P10074 688 aaPredicted RBP19.24■□□□□ 0.67
LIMS2-216ENST00000494613 MS4A1P11836 297 aa19.24■□□□□ 0.67
LIMS2-216ENST00000494613 GJA5P36382 358 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms