RNA–Protein interactions for RNA: ENST00000494317.1

LCN2-207, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 625 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-207ENST00000494317 TNFAIP1Q13829 316 aa28.55■■■□□ 2.16
LCN2-207ENST00000494317 SPRYD7Q5W111 196 aa28.55■■■□□ 2.16
LCN2-207ENST00000494317 ARHGAP45Q92619 1136 aa28.55■■■□□ 2.16
LCN2-207ENST00000494317 HDAC5Q9UQL6 1122 aa28.55■■■□□ 2.16
LCN2-207ENST00000494317 CIAO1O76071 339 aa28.54■■■□□ 2.16
LCN2-207ENST00000494317 SLC10A4Q96EP9 437 aa28.54■■■□□ 2.16
LCN2-207ENST00000494317 CLMNQ96JQ2 1002 aa28.54■■■□□ 2.16
LCN2-207ENST00000494317 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.54■■■□□ 2.16
LCN2-207ENST00000494317 FBXO3Q9UK99 471 aa28.54■■■□□ 2.16
LCN2-207ENST00000494317 HDLBPQ00341 1268 aaKnown RBP28.53■■■□□ 2.16
LCN2-207ENST00000494317 SREBF2Q12772 1141 aa28.53■■■□□ 2.16
LCN2-207ENST00000494317 INTS3Q68E01 1043 aaKnown RBP28.52■■■□□ 2.16
LCN2-207ENST00000494317 TCP10L2B9ZVM9 353 aa28.51■■■□□ 2.15
LCN2-207ENST00000494317 USP2O75604 605 aaPredicted RBP28.51■■■□□ 2.15
LCN2-207ENST00000494317 TBC1D8O95759 1140 aa28.51■■■□□ 2.15
LCN2-207ENST00000494317 IREB2P48200 963 aaKnown RBP28.51■■■□□ 2.15
LCN2-207ENST00000494317 TEKT1Q969V4 418 aa28.51■■■□□ 2.15
LCN2-207ENST00000494317 CEP126Q9P2H0 1117 aa28.51■■■□□ 2.15
LCN2-207ENST00000494317 PA2G4Q9UQ80 394 aaKnown RBP28.51■■■□□ 2.15
LCN2-207ENST00000494317 ATP2B3Q16720 1220 aa28.5■■■□□ 2.15
LCN2-207ENST00000494317 CDAN1Q8IWY9 1227 aa28.5■■■□□ 2.15
LCN2-207ENST00000494317 TEPSINQ96N21 525 aa28.5■■■□□ 2.15
LCN2-207ENST00000494317 SUGT1Q9Y2Z0 365 aa28.5■■■□□ 2.15
LCN2-207ENST00000494317 UNCXA6NJT0 531 aa28.49■■■□□ 2.15
LCN2-207ENST00000494317 WNK4Q96J92 1243 aa28.49■■■□□ 2.15
LCN2-207ENST00000494317 TMEM39BQ9GZU3 492 aa28.49■■■□□ 2.15
LCN2-207ENST00000494317 IL15P40933 162 aaPredicted RBP28.48■■■□□ 2.15
LCN2-207ENST00000494317 TNNI2P48788 182 aa28.48■■■□□ 2.15
LCN2-207ENST00000494317 MIER1Q8N108 512 aa28.48■■■□□ 2.15
LCN2-207ENST00000494317 ZDHHC15Q96MV8 337 aa28.48■■■□□ 2.15
LCN2-207ENST00000494317 MRIQ9BWK5 157 aa28.48■■■□□ 2.15
LCN2-207ENST00000494317 COPRSQ9NQ92 184 aa28.48■■■□□ 2.15
LCN2-207ENST00000494317 MAST3O60307 1309 aa28.47■■■□□ 2.15
LCN2-207ENST00000494317 IPO8O15397 1037 aaKnown RBP28.47■■■□□ 2.15
LCN2-207ENST00000494317 BCAR3O75815 825 aa28.47■■■□□ 2.15
LCN2-207ENST00000494317 GNAI3P08754 354 aa28.47■■■□□ 2.15
LCN2-207ENST00000494317 ZBTB48P10074 688 aaPredicted RBP28.47■■■□□ 2.15
LCN2-207ENST00000494317 WDR66Q8TBY9 1149 aa28.47■■■□□ 2.15
LCN2-207ENST00000494317 MANSC4A6NHS7 340 aaPredicted RBP28.46■■■□□ 2.15
LCN2-207ENST00000494317 TRIM27P14373 513 aa28.46■■■□□ 2.15
LCN2-207ENST00000494317 CACNB3P54284 484 aa28.46■■■□□ 2.15
LCN2-207ENST00000494317 CTU1Q7Z7A3 348 aaKnown RBP28.46■■■□□ 2.15
LCN2-207ENST00000494317 ANKRD13AQ8IZ07 590 aa28.46■■■□□ 2.15
LCN2-207ENST00000494317 ZNF296Q8WUU4 475 aaPredicted RBP28.46■■■□□ 2.15
LCN2-207ENST00000494317 FRAT1Q92837 279 aaPredicted RBP28.46■■■□□ 2.15
LCN2-207ENST00000494317 TNNQ9UQP3 1299 aa28.46■■■□□ 2.15
LCN2-207ENST00000494317 APOBEC3HQ6NTF7 200 aaKnown RBP28.45■■■□□ 2.14
LCN2-207ENST00000494317 ATF7IPQ6VMQ6 1270 aa28.45■■■□□ 2.14
LCN2-207ENST00000494317 MYH13Q9UKX3 1938 aa28.44■■■□□ 2.14
LCN2-207ENST00000494317 HHIPL2Q6UWX4 724 aa28.44■■■□□ 2.14
LCN2-207ENST00000494317 GPR25O00155 361 aa28.43■■■□□ 2.14
LCN2-207ENST00000494317 SRGAP3O43295 1099 aa28.43■■■□□ 2.14
LCN2-207ENST00000494317 GJA5P36382 358 aa28.43■■■□□ 2.14
LCN2-207ENST00000494317 INHBEP58166 350 aa28.43■■■□□ 2.14
LCN2-207ENST00000494317 HNRNPUQ00839 825 aaKnown RBP eCLIP28.43■■■□□ 2.14
LCN2-207ENST00000494317 CFHR5Q9BXR6 569 aa28.43■■■□□ 2.14
LCN2-207ENST00000494317 R3HDMLQ9H3Y0 253 aa28.43■■■□□ 2.14
LCN2-207ENST00000494317 GNL3LQ9NVN8 582 aaKnown RBP28.43■■■□□ 2.14
LCN2-207ENST00000494317 TMOD2Q9NZR1 351 aa28.43■■■□□ 2.14
LCN2-207ENST00000494317 OTOFQ9HC10 1997 aa28.42■■■□□ 2.14
LCN2-207ENST00000494317 PHKA1P46020 1223 aa28.42■■■□□ 2.14
LCN2-207ENST00000494317 NOM1Q5C9Z4 860 aaKnown RBP28.42■■■□□ 2.14
LCN2-207ENST00000494317 DIEXFQ68CQ4 756 aaKnown RBP28.42■■■□□ 2.14
LCN2-207ENST00000494317 IFNL1Q8IU54 200 aa28.42■■■□□ 2.14
LCN2-207ENST00000494317 ALDH1A1P00352 501 aa28.41■■■□□ 2.14
LCN2-207ENST00000494317 ADORA1P30542 326 aa28.41■■■□□ 2.14
LCN2-207ENST00000494317 MTX1Q13505 466 aa28.41■■■□□ 2.14
LCN2-207ENST00000494317 CLUAP1Q96AJ1 413 aa28.41■■■□□ 2.14
LCN2-207ENST00000494317 ELP3Q9H9T3 547 aa28.41■■■□□ 2.14
LCN2-207ENST00000494317 IGF2BP3O00425 579 aaKnown RBP eCLIP28.4■■■□□ 2.14
LCN2-207ENST00000494317 FKBP1CQ5VVH2 108 aa28.4■■■□□ 2.14
LCN2-207ENST00000494317 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.4■■■□□ 2.14
LCN2-207ENST00000494317 SEMA3EO15041 775 aa28.39■■■□□ 2.14
LCN2-207ENST00000494317 PRDX5P30044 214 aa28.39■■■□□ 2.14
LCN2-207ENST00000494317 DIXDC1Q155Q3 683 aa28.39■■■□□ 2.14
LCN2-207ENST00000494317 FAM83AQ86UY5 434 aa28.39■■■□□ 2.14
LCN2-207ENST00000494317 DENND2AQ9ULE3 1009 aa28.39■■■□□ 2.14
LCN2-207ENST00000494317 LAMB1P07942 1786 aa28.39■■■□□ 2.13
LCN2-207ENST00000494317 MAP3K9P80192 1104 aa28.38■■■□□ 2.13
LCN2-207ENST00000494317 CCDC102BQ68D86 513 aa28.38■■■□□ 2.13
LCN2-207ENST00000494317 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.38■■■□□ 2.13
LCN2-207ENST00000494317 OPTNQ96CV9 577 aa28.38■■■□□ 2.13
LCN2-207ENST00000494317 DAGLAQ9Y4D2 1042 aa28.38■■■□□ 2.13
LCN2-207ENST00000494317 SALL1Q9NSC2 1324 aa28.38■■■□□ 2.13
LCN2-207ENST00000494317 GNAI2P04899 355 aa28.37■■■□□ 2.13
LCN2-207ENST00000494317 LDHBP07195 334 aaKnown RBP28.37■■■□□ 2.13
LCN2-207ENST00000494317 RGS19P49795 217 aa28.37■■■□□ 2.13
LCN2-207ENST00000494317 TIMM10P62072 90 aa28.37■■■□□ 2.13
LCN2-207ENST00000494317 VGLL4Q14135 290 aa28.37■■■□□ 2.13
LCN2-207ENST00000494317 FKTNO75072 461 aa28.36■■■□□ 2.13
LCN2-207ENST00000494317 TFCP2Q12800 502 aa28.36■■■□□ 2.13
LCN2-207ENST00000494317 CNKSR2Q8WXI2 1034 aa28.36■■■□□ 2.13
LCN2-207ENST00000494317 ZKSCAN2Q63HK3 967 aa28.35■■■□□ 2.13
LCN2-207ENST00000494317 CSADQ9Y600 493 aa28.35■■■□□ 2.13
LCN2-207ENST00000494317 A0A1B0GUL7 405 aa28.34■■■□□ 2.13
LCN2-207ENST00000494317 ZBTB22O15209 634 aa28.34■■■□□ 2.13
LCN2-207ENST00000494317 CDC42EP5Q6NZY7 148 aa28.34■■■□□ 2.13
LCN2-207ENST00000494317 TMEM57Q8N5G2 664 aa28.34■■■□□ 2.13
LCN2-207ENST00000494317 AKAP2Q9Y2D5 859 aa28.34■■■□□ 2.13
LCN2-207ENST00000494317 RPAP1Q9BWH6 1393 aaPredicted RBP28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms