RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 JDP2Q8WYK2 163 aa21.66■■□□□ 1.06
COL27A1-207ENST00000494090 SNX14Q9Y5W7 946 aa21.66■■□□□ 1.06
COL27A1-207ENST00000494090 SLC27A2O14975 620 aa21.66■■□□□ 1.06
COL27A1-207ENST00000494090 GCP02774 474 aa21.66■■□□□ 1.06
COL27A1-207ENST00000494090 LLPHQ9BRT6 129 aaKnown RBP21.66■■□□□ 1.06
COL27A1-207ENST00000494090 RNF216Q9NWF9 866 aaPredicted RBP21.66■■□□□ 1.06
COL27A1-207ENST00000494090 CPA1P15085 419 aa21.65■■□□□ 1.06
COL27A1-207ENST00000494090 HS2ST1Q7LGA3 356 aa21.65■■□□□ 1.06
COL27A1-207ENST00000494090 F8W031 263 aaPredicted RBP21.65■■□□□ 1.06
COL27A1-207ENST00000494090 MCM6Q14566 821 aa21.65■■□□□ 1.06
COL27A1-207ENST00000494090 TIGD1Q96MW7 591 aa21.65■■□□□ 1.06
COL27A1-207ENST00000494090 RBM28Q9NW13 759 aaKnown RBP21.65■■□□□ 1.06
COL27A1-207ENST00000494090 SH2D4AQ9H788 454 aa21.65■■□□□ 1.06
COL27A1-207ENST00000494090 IVLP07476 585 aa21.65■■□□□ 1.06
COL27A1-207ENST00000494090 MYL5Q02045 173 aa21.65■■□□□ 1.06
COL27A1-207ENST00000494090 CCDC77Q9BR77 488 aa21.65■■□□□ 1.06
COL27A1-207ENST00000494090 SBNO1A3KN83 1393 aa21.64■■□□□ 1.06
COL27A1-207ENST00000494090 OPA1O60313 960 aa21.64■■□□□ 1.06
COL27A1-207ENST00000494090 C6orf163Q5TEZ5 329 aa21.64■■□□□ 1.06
COL27A1-207ENST00000494090 TTC6Q86TZ1 520 aa21.64■■□□□ 1.06
COL27A1-207ENST00000494090 MMRN2Q9H8L6 949 aa21.64■■□□□ 1.06
COL27A1-207ENST00000494090 MCM9Q9NXL9 1143 aa21.64■■□□□ 1.06
COL27A1-207ENST00000494090 LDHBP07195 334 aaKnown RBP21.64■■□□□ 1.05
COL27A1-207ENST00000494090 IQUBQ8NA54 791 aa21.64■■□□□ 1.05
COL27A1-207ENST00000494090 MSANTD4Q8NCY6 345 aa21.64■■□□□ 1.05
COL27A1-207ENST00000494090 SGSM2O43147 1006 aa21.64■■□□□ 1.05
COL27A1-207ENST00000494090 CCDC42Q96M95 316 aa21.64■■□□□ 1.05
COL27A1-207ENST00000494090 UBXN1Q04323 297 aa21.64■■□□□ 1.05
COL27A1-207ENST00000494090 NBPF14Q5TI25 921 aa21.63■■□□□ 1.05
COL27A1-207ENST00000494090 CCDC94Q9BW85 323 aaPredicted RBP21.63■■□□□ 1.05
COL27A1-207ENST00000494090 TNNI2P48788 182 aa21.63■■□□□ 1.05
COL27A1-207ENST00000494090 ZNF445P59923 1031 aa21.63■■□□□ 1.05
COL27A1-207ENST00000494090 TNNI3KQ59H18 835 aa21.63■■□□□ 1.05
COL27A1-207ENST00000494090 PPP1R14CQ8TAE6 165 aa21.63■■□□□ 1.05
COL27A1-207ENST00000494090 FPGT-TNNI3KV9GXZ4 949 aa21.63■■□□□ 1.05
COL27A1-207ENST00000494090 FAM13AO94988 1023 aa21.63■■□□□ 1.05
COL27A1-207ENST00000494090 SYT10Q6XYQ8 523 aa21.63■■□□□ 1.05
COL27A1-207ENST00000494090 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.63■■□□□ 1.051e-9■■□□□ 13.6
COL27A1-207ENST00000494090 V9GYY5 206 aaPredicted RBP21.63■■□□□ 1.05
COL27A1-207ENST00000494090 KIF24Q5T7B8 1368 aa21.63■■□□□ 1.05
COL27A1-207ENST00000494090 STX17P56962 302 aa21.62■■□□□ 1.05
COL27A1-207ENST00000494090 C8orf37Q96NL8 207 aa21.62■■□□□ 1.05
COL27A1-207ENST00000494090 TCHPQ9BT92 498 aa21.62■■□□□ 1.05
COL27A1-207ENST00000494090 METTL22Q9BUU2 404 aaPredicted RBP21.62■■□□□ 1.05
COL27A1-207ENST00000494090 DENND2AQ9ULE3 1009 aa21.62■■□□□ 1.05
COL27A1-207ENST00000494090 A0A1B0GVL5 298 aa21.62■■□□□ 1.05
COL27A1-207ENST00000494090 TUBBP07437 444 aa21.62■■□□□ 1.05
COL27A1-207ENST00000494090 PPP1R2P41236 205 aa21.62■■□□□ 1.05
COL27A1-207ENST00000494090 ATP2A1O14983 1001 aa21.62■■□□□ 1.05
COL27A1-207ENST00000494090 MIGA1Q8NAN2 632 aa21.62■■□□□ 1.05
COL27A1-207ENST00000494090 EYA2O00167 538 aa21.61■■□□□ 1.05
COL27A1-207ENST00000494090 CNGA4Q8IV77 575 aa21.61■■□□□ 1.05
COL27A1-207ENST00000494090 NSFL1CQ9UNZ2 370 aaKnown RBP21.61■■□□□ 1.05
COL27A1-207ENST00000494090 PARP10Q53GL7 1025 aa21.61■■□□□ 1.05
COL27A1-207ENST00000494090 PLBD2Q8NHP8 589 aa21.61■■□□□ 1.05
COL27A1-207ENST00000494090 CLSTN2Q9H4D0 955 aa21.61■■□□□ 1.05
COL27A1-207ENST00000494090 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.61■■□□□ 1.05
COL27A1-207ENST00000494090 DTHD1Q6ZMT9 781 aa21.61■■□□□ 1.05
COL27A1-207ENST00000494090 STMN4Q9H169 189 aaPredicted RBP21.61■■□□□ 1.05
COL27A1-207ENST00000494090 MCM7P33993 719 aa21.61■■□□□ 1.05
COL27A1-207ENST00000494090 NCKAP5LQ9HCH0 1330 aa21.6■■□□□ 1.05
COL27A1-207ENST00000494090 TMEM87BQ96K49 555 aa21.6■■□□□ 1.05
COL27A1-207ENST00000494090 VEZTQ9HBM0 779 aa21.6■■□□□ 1.05
COL27A1-207ENST00000494090 RILPL1Q5EBL4 403 aa21.6■■□□□ 1.05
COL27A1-207ENST00000494090 APBB1IPQ7Z5R6 666 aaPredicted RBP21.6■■□□□ 1.05
COL27A1-207ENST00000494090 HELBQ8NG08 1087 aaPredicted RBP21.6■■□□□ 1.05
COL27A1-207ENST00000494090 MRVI1Q9Y6F6 885 aa21.6■■□□□ 1.05
COL27A1-207ENST00000494090 KARSQ15046 597 aaKnown RBP21.6■■□□□ 1.05
COL27A1-207ENST00000494090 ZNF569Q5MCW4 686 aa21.6■■□□□ 1.05
COL27A1-207ENST00000494090 CERS3Q8IU89 383 aa21.6■■□□□ 1.05
COL27A1-207ENST00000494090 RBM17Q96I25 401 aaKnown RBP21.6■■□□□ 1.05
COL27A1-207ENST00000494090 TFCP2L1Q9NZI6 479 aa21.6■■□□□ 1.05
COL27A1-207ENST00000494090 MAPK8IP2Q13387 824 aaPredicted RBP21.6■■□□□ 1.05
COL27A1-207ENST00000494090 IQCGQ9H095 443 aaKnown RBP21.6■■□□□ 1.05
COL27A1-207ENST00000494090 LZTFL1Q9NQ48 299 aa21.6■■□□□ 1.05
COL27A1-207ENST00000494090 LUC7L2Q9Y383 392 aaKnown RBP21.6■■□□□ 1.05
COL27A1-207ENST00000494090 KIF21AQ7Z4S6 1674 aa21.6■■□□□ 1.05
COL27A1-207ENST00000494090 RXRAP19793 462 aa21.59■■□□□ 1.05
COL27A1-207ENST00000494090 NEK11Q8NG66 645 aa21.59■■□□□ 1.05
COL27A1-207ENST00000494090 GUCA1BQ9UMX6 200 aa21.59■■□□□ 1.05
COL27A1-207ENST00000494090 BAG1Q99933 345 aaPredicted RBP21.59■■□□□ 1.05
COL27A1-207ENST00000494090 A0A1B0GUL7 405 aa21.59■■□□□ 1.05
COL27A1-207ENST00000494090 CEP63Q96MT8 703 aa21.59■■□□□ 1.05
COL27A1-207ENST00000494090 NSRP1Q9H0G5 558 aaKnown RBP21.59■■□□□ 1.05
COL27A1-207ENST00000494090 CLEC11AQ9Y240 323 aa21.59■■□□□ 1.05
COL27A1-207ENST00000494090 ANO1Q5XXA6 986 aa21.58■■□□□ 1.05
COL27A1-207ENST00000494090 ZNF790Q6PG37 636 aa21.58■■□□□ 1.05
COL27A1-207ENST00000494090 A0A1W2PRG0 241 aa21.58■■□□□ 1.04
COL27A1-207ENST00000494090 AKR1B15C9JRZ8 316 aaPredicted RBP21.58■■□□□ 1.04
COL27A1-207ENST00000494090 CEP83Q9Y592 693 aa21.58■■□□□ 1.04
COL27A1-207ENST00000494090 MBD4O95243 580 aa21.58■■□□□ 1.04
COL27A1-207ENST00000494090 RPL13P26373 211 aaKnown RBP21.58■■□□□ 1.04
COL27A1-207ENST00000494090 CCDC129Q6ZRS4 1044 aa21.58■■□□□ 1.04
COL27A1-207ENST00000494090 TBX22Q9Y458 520 aa21.57■■□□□ 1.04
COL27A1-207ENST00000494090 USP19O94966 1318 aa21.57■■□□□ 1.04
COL27A1-207ENST00000494090 VTI1AQ96AJ9 217 aa21.57■■□□□ 1.04
COL27A1-207ENST00000494090 TIMM10P62072 90 aa21.56■■□□□ 1.04
COL27A1-207ENST00000494090 DBNDD2Q9BQY9 259 aa21.56■■□□□ 1.04
COL27A1-207ENST00000494090 PTPRTO14522 1441 aa21.56■■□□□ 1.04
COL27A1-207ENST00000494090 DEXIO95424 95 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms