RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 VPS37CA5D8V6 355 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-208ENST00000494028 WTIPA6NIX2 430 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-208ENST00000494028 PRPF40AO75400 957 aaKnown RBP12.6□□□□□ -0.39
CLCN6-208ENST00000494028 TRIM37O94972 964 aa12.6□□□□□ -0.39
CLCN6-208ENST00000494028 MBD3O95983 291 aa12.6□□□□□ -0.39
CLCN6-208ENST00000494028 ALX1Q15699 326 aa12.6□□□□□ -0.39
CLCN6-208ENST00000494028 L1TD1Q5T7N2 865 aaKnown RBP12.6□□□□□ -0.39
CLCN6-208ENST00000494028 SLC51AQ86UW1 340 aa12.6□□□□□ -0.39
CLCN6-208ENST00000494028 LCORLQ8N3X6 602 aa12.6□□□□□ -0.39
CLCN6-208ENST00000494028 NSUN7Q8NE18 718 aaKnown RBP12.6□□□□□ -0.39
CLCN6-208ENST00000494028 SMARCC2Q8TAQ2 1214 aa12.6□□□□□ -0.39
CLCN6-208ENST00000494028 AIDAQ96BJ3 306 aa12.6□□□□□ -0.39
CLCN6-208ENST00000494028 ARMT1Q9H993 441 aa12.6□□□□□ -0.39
CLCN6-208ENST00000494028 ISY1Q9ULR0 285 aaKnown RBP12.6□□□□□ -0.39
CLCN6-208ENST00000494028 FOCADQ5VW36 1801 aa12.6□□□□□ -0.39
CLCN6-208ENST00000494028 NEDD4P46934 1319 aa12.6□□□□□ -0.39
CLCN6-208ENST00000494028 GOLGA6L3A6NEY3 463 aa12.59□□□□□ -0.39
CLCN6-208ENST00000494028 SEMA3EO15041 775 aa12.59□□□□□ -0.39
CLCN6-208ENST00000494028 ZBTB22O15209 634 aa12.59□□□□□ -0.39
CLCN6-208ENST00000494028 PRC1O43663 620 aa12.59□□□□□ -0.39
CLCN6-208ENST00000494028 PDCP20941 246 aa12.59□□□□□ -0.39
CLCN6-208ENST00000494028 EVCP57679 992 aa12.59□□□□□ -0.39
CLCN6-208ENST00000494028 RPS8P62241 208 aaKnown RBP12.59□□□□□ -0.39
CLCN6-208ENST00000494028 GRAPQ13588 217 aa12.59□□□□□ -0.39
CLCN6-208ENST00000494028 CAVIN1Q6NZI2 390 aaKnown RBP12.59□□□□□ -0.39
CLCN6-208ENST00000494028 GRAPLQ8TC17 118 aaPredicted RBP12.59□□□□□ -0.39
CLCN6-208ENST00000494028 ANKRD2Q9GZV1 360 aa12.59□□□□□ -0.39
CLCN6-208ENST00000494028 IQSEC3Q9UPP2 1182 aaPredicted RBP12.59□□□□□ -0.39
CLCN6-208ENST00000494028 CNPY2Q9Y2B0 182 aa12.59□□□□□ -0.39
CLCN6-208ENST00000494028 ZNF646O15015 1829 aaPredicted RBP12.59□□□□□ -0.39
CLCN6-208ENST00000494028 PTPDC1A2A3K4 754 aa12.58□□□□□ -0.4
CLCN6-208ENST00000494028 ZNF213O14771 459 aa12.58□□□□□ -0.4
CLCN6-208ENST00000494028 CTDNEP1O95476 244 aa12.58□□□□□ -0.4
CLCN6-208ENST00000494028 ZNF445P59923 1031 aa12.58□□□□□ -0.4
CLCN6-208ENST00000494028 FGD1P98174 961 aa12.58□□□□□ -0.4
CLCN6-208ENST00000494028 DDR1Q08345 913 aa12.58□□□□□ -0.4
CLCN6-208ENST00000494028 CHST3Q7LGC8 479 aa12.58□□□□□ -0.4
CLCN6-208ENST00000494028 FBXO33Q7Z6M2 555 aa12.58□□□□□ -0.4
CLCN6-208ENST00000494028 RALYLQ86SE5 291 aaKnown RBP12.58□□□□□ -0.4
CLCN6-208ENST00000494028 ADGRA1Q86SQ6 560 aa12.58□□□□□ -0.4
CLCN6-208ENST00000494028 NCOA7Q8NI08 942 aa12.58□□□□□ -0.4
CLCN6-208ENST00000494028 NKX2-3Q8TAU0 364 aa12.58□□□□□ -0.4
CLCN6-208ENST00000494028 FAM84BQ96KN1 310 aaPredicted RBP12.58□□□□□ -0.4
CLCN6-208ENST00000494028 LLPHQ9BRT6 129 aaKnown RBP12.58□□□□□ -0.4
CLCN6-208ENST00000494028 GDPD2Q9HCC8 539 aa12.58□□□□□ -0.4
CLCN6-208ENST00000494028 GPHNQ9NQX3 736 aaPredicted RBP12.58□□□□□ -0.4
CLCN6-208ENST00000494028 GNL3LQ9NVN8 582 aaKnown RBP12.58□□□□□ -0.4
CLCN6-208ENST00000494028 RBM27Q9P2N5 1060 aaKnown RBP12.58□□□□□ -0.4
CLCN6-208ENST00000494028 DENND2AQ9ULE3 1009 aa12.58□□□□□ -0.4
CLCN6-208ENST00000494028 NSFL1CQ9UNZ2 370 aaKnown RBP12.58□□□□□ -0.4
CLCN6-208ENST00000494028 GSG1L2A8MUP6 293 aa12.57□□□□□ -0.4
CLCN6-208ENST00000494028 MCM5P33992 734 aa12.57□□□□□ -0.4
CLCN6-208ENST00000494028 RESTQ13127 1097 aa12.57□□□□□ -0.4
CLCN6-208ENST00000494028 TXNRD1Q16881 649 aa12.57□□□□□ -0.4
CLCN6-208ENST00000494028 FOXD4L6Q3SYB3 417 aaPredicted RBP12.57□□□□□ -0.4
CLCN6-208ENST00000494028 CRY2Q49AN0 593 aa12.57□□□□□ -0.4
CLCN6-208ENST00000494028 CAVIN4Q5BKX8 364 aa12.57□□□□□ -0.4
CLCN6-208ENST00000494028 FOXD4L3Q6VB84 417 aaPredicted RBP12.57□□□□□ -0.4
CLCN6-208ENST00000494028 GAS2L3Q86XJ1 694 aa12.57□□□□□ -0.4
CLCN6-208ENST00000494028 ZNF274Q96GC6 653 aaPredicted RBP12.57□□□□□ -0.4
CLCN6-208ENST00000494028 ATP6V1DQ9Y5K8 247 aa12.57□□□□□ -0.4
CLCN6-208ENST00000494028 MYH6P13533 1939 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 NID2Q14112 1375 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 MYH2Q9UKX2 1941 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 GOLGA8BA8MQT2 603 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 SH2B2O14492 632 aaPredicted RBP12.56□□□□□ -0.4
CLCN6-208ENST00000494028 FIBPO43427 364 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 PRKAB2O43741 272 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 GADD45BO75293 160 aaPredicted RBP12.56□□□□□ -0.4
CLCN6-208ENST00000494028 PDIA4P13667 645 aaKnown RBP12.56□□□□□ -0.4
CLCN6-208ENST00000494028 GNAT2P19087 354 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 CYP7A1P22680 504 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 PDIA3P30101 505 aaKnown RBP12.56□□□□□ -0.4
CLCN6-208ENST00000494028 ZNF827Q17R98 1081 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 ZSCAN23Q3MJ62 389 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 LARP1BQ659C4 914 aaKnown RBP12.56□□□□□ -0.4
CLCN6-208ENST00000494028 CYB5R4Q7L1T6 521 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 IFNL3Q8IZI9 196 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 MIGA1Q8NAN2 632 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 ZNF384Q8TF68 577 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 NAPBQ9H115 298 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 NCOA5Q9HCD5 579 aaKnown RBP12.56□□□□□ -0.4
CLCN6-208ENST00000494028 TMEM63CQ9P1W3 806 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 LRP2BPQ9P2M1 347 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 TACC3Q9Y6A5 838 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 ADAMTSL1Q8N6G6 1762 aa12.56□□□□□ -0.4
CLCN6-208ENST00000494028 KLF18A0A0U1RQI7 1052 aa12.55□□□□□ -0.4
CLCN6-208ENST00000494028 PATL2C9JE40 543 aaKnown RBP12.55□□□□□ -0.4
CLCN6-208ENST00000494028 POLRMTO00411 1230 aaKnown RBP12.55□□□□□ -0.4
CLCN6-208ENST00000494028 NPHP1O15259 732 aa12.55□□□□□ -0.4
CLCN6-208ENST00000494028 ST5P78524 1137 aa12.55□□□□□ -0.4
CLCN6-208ENST00000494028 HMGN5P82970 282 aaKnown RBP12.55□□□□□ -0.4
CLCN6-208ENST00000494028 DNM1Q05193 864 aaKnown RBP12.55□□□□□ -0.4
CLCN6-208ENST00000494028 USP48Q86UV5 1035 aa12.55□□□□□ -0.4
CLCN6-208ENST00000494028 PROM2Q8N271 834 aa12.55□□□□□ -0.4
CLCN6-208ENST00000494028 RIOK1Q9BRS2 568 aaKnown RBP12.55□□□□□ -0.4
CLCN6-208ENST00000494028 TFCP2L1Q9NZI6 479 aa12.55□□□□□ -0.4
CLCN6-208ENST00000494028 BRPF3Q9ULD4 1205 aa12.55□□□□□ -0.4
CLCN6-208ENST00000494028 HPS5Q9UPZ3 1129 aa12.55□□□□□ -0.4
CLCN6-208ENST00000494028 XDHP47989 1333 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms