RNA–Protein interactions for RNA: ENST00000494018.1

NR1H3-225, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-225ENST00000494018 TNFRSF10AO00220 468 aa12.59□□□□□ -0.39
NR1H3-225ENST00000494018 PDE8AO60658 829 aa12.59□□□□□ -0.39
NR1H3-225ENST00000494018 ZBTB38Q8NAP3 1195 aaPredicted RBP12.59□□□□□ -0.39
NR1H3-225ENST00000494018 MYLIPQ8WY64 445 aa12.59□□□□□ -0.39
NR1H3-225ENST00000494018 TMEM39BQ9GZU3 492 aa12.59□□□□□ -0.39
NR1H3-225ENST00000494018 TDRD3Q9H7E2 651 aaKnown RBP12.59□□□□□ -0.39
NR1H3-225ENST00000494018 CDH23Q9H251 3354 aa12.58□□□□□ -0.39
NR1H3-225ENST00000494018 PDHXO00330 501 aa12.58□□□□□ -0.4
NR1H3-225ENST00000494018 NFE2L2Q16236 605 aa12.58□□□□□ -0.4
NR1H3-225ENST00000494018 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.58□□□□□ -0.4
NR1H3-225ENST00000494018 MTMR14Q8NCE2 650 aa12.58□□□□□ -0.4
NR1H3-225ENST00000494018 SLAIN1Q8ND83 568 aa12.58□□□□□ -0.4
NR1H3-225ENST00000494018 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.58□□□□□ -0.4
NR1H3-225ENST00000494018 TEPSINQ96N21 525 aa12.58□□□□□ -0.4
NR1H3-225ENST00000494018 SNCAIPQ9Y6H5 919 aa12.58□□□□□ -0.4
NR1H3-225ENST00000494018 DDX60LQ5H9U9 1706 aaKnown RBP12.57□□□□□ -0.4
NR1H3-225ENST00000494018 SPDYE5A6NIY4 337 aa12.57□□□□□ -0.4
NR1H3-225ENST00000494018 NEFMP07197 916 aa12.57□□□□□ -0.4
NR1H3-225ENST00000494018 FLT3LGP49771 235 aa12.57□□□□□ -0.4
NR1H3-225ENST00000494018 SNAPC2Q13487 334 aa12.57□□□□□ -0.4
NR1H3-225ENST00000494018 ZNF697Q5TEC3 545 aa12.57□□□□□ -0.4
NR1H3-225ENST00000494018 MYD88Q99836 296 aa12.57□□□□□ -0.4
NR1H3-225ENST00000494018 CD209Q9NNX6 404 aa12.57□□□□□ -0.4
NR1H3-225ENST00000494018 ZNF70Q9UC06 446 aaPredicted RBP12.57□□□□□ -0.4
NR1H3-225ENST00000494018 CYP2C8P10632 490 aa12.56□□□□□ -0.4
NR1H3-225ENST00000494018 HOXD11P31277 338 aaPredicted RBP12.56□□□□□ -0.4
NR1H3-225ENST00000494018 MMP14P50281 582 aa12.56□□□□□ -0.4
NR1H3-225ENST00000494018 FCGRTP55899 365 aa12.56□□□□□ -0.4
NR1H3-225ENST00000494018 RIC3Q7Z5B4 369 aa12.56□□□□□ -0.4
NR1H3-225ENST00000494018 SYMPKQ92797 1274 aaKnown RBP12.56□□□□□ -0.4
NR1H3-225ENST00000494018 CRISPLD2Q9H0B8 497 aa12.56□□□□□ -0.4
NR1H3-225ENST00000494018 GREM2Q9H772 168 aa12.56□□□□□ -0.4
NR1H3-225ENST00000494018 DNAH12Q6ZR08 3092 aa12.56□□□□□ -0.4
NR1H3-225ENST00000494018 CACNB3P54284 484 aa12.55□□□□□ -0.4
NR1H3-225ENST00000494018 MAP3K12Q12852 859 aa12.55□□□□□ -0.4
NR1H3-225ENST00000494018 FAM109BQ6ICB4 259 aaPredicted RBP12.55□□□□□ -0.4
NR1H3-225ENST00000494018 ERO1BQ86YB8 467 aa12.55□□□□□ -0.4
NR1H3-225ENST00000494018 HELBQ8NG08 1087 aaPredicted RBP12.55□□□□□ -0.4
NR1H3-225ENST00000494018 WRNIP1Q96S55 665 aa12.55□□□□□ -0.4
NR1H3-225ENST00000494018 CDC5LQ99459 802 aaKnown RBP12.55□□□□□ -0.4
NR1H3-225ENST00000494018 PAK6Q9NQU5 681 aaPredicted RBP12.55□□□□□ -0.4
NR1H3-225ENST00000494018 BSDC1Q9NW68 430 aaPredicted RBP12.55□□□□□ -0.4
NR1H3-225ENST00000494018 LAS1LQ9Y4W2 734 aaKnown RBP12.55□□□□□ -0.4
NR1H3-225ENST00000494018 ADGRA2Q96PE1 1338 aa12.55□□□□□ -0.4
NR1H3-225ENST00000494018 PPP2R1AP30153 589 aa12.54□□□□□ -0.4
NR1H3-225ENST00000494018 KCNJ4P48050 445 aa12.54□□□□□ -0.4
NR1H3-225ENST00000494018 TRIM28Q13263 835 aaKnown RBP12.54□□□□□ -0.4
NR1H3-225ENST00000494018 SPDYE2Q495Y8 402 aa12.54□□□□□ -0.4
NR1H3-225ENST00000494018 HDGFL1Q5TGJ6 251 aa12.54□□□□□ -0.4
NR1H3-225ENST00000494018 NBPF3Q9H094 633 aa12.54□□□□□ -0.4
NR1H3-225ENST00000494018 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.54□□□□□ -0.4
NR1H3-225ENST00000494018 LEMD3Q9Y2U8 911 aa12.54□□□□□ -0.4
NR1H3-225ENST00000494018 ARAP2Q8WZ64 1704 aa12.54□□□□□ -0.4
NR1H3-225ENST00000494018 PCCAP05165 728 aaPredicted RBP12.53□□□□□ -0.4
NR1H3-225ENST00000494018 CTSWP56202 376 aa12.53□□□□□ -0.4
NR1H3-225ENST00000494018 TRIM32Q13049 653 aa12.53□□□□□ -0.4
NR1H3-225ENST00000494018 PLEKHF1Q96S99 279 aa12.53□□□□□ -0.4
NR1H3-225ENST00000494018 SEMA6BQ9H3T3 888 aa12.53□□□□□ -0.4
NR1H3-225ENST00000494018 C11orf49Q9H6J7 331 aa12.53□□□□□ -0.4
NR1H3-225ENST00000494018 PHAXQ9H814 394 aaKnown RBP12.53□□□□□ -0.4
NR1H3-225ENST00000494018 ZCCHC17Q9NP64 241 aaKnown RBP12.53□□□□□ -0.4
NR1H3-225ENST00000494018 TAF5LO75529 589 aa12.52□□□□□ -0.41
NR1H3-225ENST00000494018 PPIL2Q13356 520 aa12.52□□□□□ -0.41
NR1H3-225ENST00000494018 TNFAIP1Q13829 316 aa12.52□□□□□ -0.41
NR1H3-225ENST00000494018 ANKRD23Q86SG2 305 aa12.52□□□□□ -0.41
NR1H3-225ENST00000494018 USP38Q8NB14 1042 aa12.52□□□□□ -0.41
NR1H3-225ENST00000494018 TTLL11Q8NHH1 800 aa12.52□□□□□ -0.41
NR1H3-225ENST00000494018 MYH3P11055 1940 aa12.52□□□□□ -0.41
NR1H3-225ENST00000494018 BCRP11274 1271 aa12.51□□□□□ -0.41
NR1H3-225ENST00000494018 HSP90B1P14625 803 aaKnown RBP12.51□□□□□ -0.41
NR1H3-225ENST00000494018 FOSL2P15408 326 aa12.51□□□□□ -0.41
NR1H3-225ENST00000494018 TJAP1Q5JTD0 557 aa12.51□□□□□ -0.41
NR1H3-225ENST00000494018 MIGA2Q7L4E1 593 aa12.51□□□□□ -0.41
NR1H3-225ENST00000494018 CWC25Q9NXE8 425 aaPredicted RBP12.51□□□□□ -0.41
NR1H3-225ENST00000494018 TNPO2O14787 897 aaKnown RBP12.5□□□□□ -0.41
NR1H3-225ENST00000494018 INPP5BP32019 993 aa12.5□□□□□ -0.41
NR1H3-225ENST00000494018 RIPK4P57078 832 aa12.5□□□□□ -0.41
NR1H3-225ENST00000494018 MOGSQ13724 837 aa12.5□□□□□ -0.41
NR1H3-225ENST00000494018 TTYH1Q9H313 450 aaPredicted RBP12.5□□□□□ -0.41
NR1H3-225ENST00000494018 DBF4Q9UBU7 674 aaPredicted RBP12.5□□□□□ -0.41
NR1H3-225ENST00000494018 PFASO15067 1338 aa12.5□□□□□ -0.41
NR1H3-225ENST00000494018 AK9Q5TCS8 1911 aa12.49□□□□□ -0.41
NR1H3-225ENST00000494018 MAPK8IP3Q9UPT6 1336 aa12.49□□□□□ -0.41
NR1H3-225ENST00000494018 IGHMBP2P38935 993 aaKnown RBP12.49□□□□□ -0.41
NR1H3-225ENST00000494018 GOLGA2Q08379 1002 aa12.49□□□□□ -0.41
NR1H3-225ENST00000494018 LRRC26Q2I0M4 334 aa12.49□□□□□ -0.41
NR1H3-225ENST00000494018 DZIP1LQ8IYY4 767 aaKnown RBP12.49□□□□□ -0.41
NR1H3-225ENST00000494018 CCDC191Q8NCU4 936 aa12.49□□□□□ -0.41
NR1H3-225ENST00000494018 PXYLP1Q8TE99 480 aa12.49□□□□□ -0.41
NR1H3-225ENST00000494018 PPM1EQ8WY54 764 aa12.49□□□□□ -0.41
NR1H3-225ENST00000494018 TTF2Q9UNY4 1162 aaKnown RBP12.49□□□□□ -0.41
NR1H3-225ENST00000494018 FAM205AQ6ZU69 1335 aa12.48□□□□□ -0.41
NR1H3-225ENST00000494018 CHRNDQ07001 517 aa12.48□□□□□ -0.41
NR1H3-225ENST00000494018 NEUROD2Q15784 382 aa12.48□□□□□ -0.41
NR1H3-225ENST00000494018 GPAT2Q6NUI2 795 aa12.48□□□□□ -0.41
NR1H3-225ENST00000494018 ANKLE1Q8NAG6 615 aa12.48□□□□□ -0.41
NR1H3-225ENST00000494018 PARK7Q99497 189 aaKnown RBP12.48□□□□□ -0.41
NR1H3-225ENST00000494018 HYPKQ9NX55 129 aa12.48□□□□□ -0.41
NR1H3-225ENST00000494018 COL2A1P02458 1487 aaPredicted RBP12.47□□□□□ -0.41
NR1H3-225ENST00000494018 TCF20Q9UGU0 1960 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms