RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 RGS3P49796 1198 aa7.6□□□□□ -1.19
CPSF7-213ENST00000494016 FOXK2Q01167 660 aa7.6□□□□□ -1.19
CPSF7-213ENST00000494016 TWISTNBQ3B726 338 aaPredicted RBP7.6□□□□□ -1.19
CPSF7-213ENST00000494016 GNASQ5JWF2 1037 aa7.6□□□□□ -1.19
CPSF7-213ENST00000494016 MCM10Q7L590 875 aa7.6□□□□□ -1.19
CPSF7-213ENST00000494016 FTSJ3Q8IY81 847 aaKnown RBP7.6□□□□□ -1.19
CPSF7-213ENST00000494016 TNS4Q8IZW8 715 aa7.6□□□□□ -1.19
CPSF7-213ENST00000494016 ZNF295-AS1Q8N0V1 137 aa7.6□□□□□ -1.19
CPSF7-213ENST00000494016 RHBDD1Q8TEB9 315 aa7.6□□□□□ -1.19
CPSF7-213ENST00000494016 DDX19BQ9UMR2 479 aa7.6□□□□□ -1.19
CPSF7-213ENST00000494016 ABCA3Q99758 1704 aa7.6□□□□□ -1.19
CPSF7-213ENST00000494016 PXDNQ92626 1479 aa7.6□□□□□ -1.19
CPSF7-213ENST00000494016 KIF1AQ12756 1690 aa7.6□□□□□ -1.19
CPSF7-213ENST00000494016 KIF16BQ96L93 1317 aa7.59□□□□□ -1.19
CPSF7-213ENST00000494016 HDAC1Q13547 482 aaPredicted RBP7.59□□□□□ -1.19
CPSF7-213ENST00000494016 C4orf17Q53FE4 359 aa7.59□□□□□ -1.19
CPSF7-213ENST00000494016 NPAS3Q8IXF0 933 aa7.59□□□□□ -1.19
CPSF7-213ENST00000494016 KCTD17Q8N5Z5 321 aa7.59□□□□□ -1.19
CPSF7-213ENST00000494016 TSEN2Q8NCE0 465 aaKnown RBP7.59□□□□□ -1.19
CPSF7-213ENST00000494016 IP6K1Q92551 441 aa7.59□□□□□ -1.19
CPSF7-213ENST00000494016 ORAI2Q96SN7 254 aa7.59□□□□□ -1.19
CPSF7-213ENST00000494016 NOVA2Q9UNW9 492 aaKnown RBP7.59□□□□□ -1.19
CPSF7-213ENST00000494016 USP3Q9Y6I4 520 aa7.59□□□□□ -1.19
CPSF7-213ENST00000494016 HTATSF1O43719 755 aaKnown RBP7.58□□□□□ -1.2
CPSF7-213ENST00000494016 ANP32AP39687 249 aaKnown RBP7.58□□□□□ -1.2
CPSF7-213ENST00000494016 KRT24Q2M2I5 525 aa7.58□□□□□ -1.2
CPSF7-213ENST00000494016 ITPRIPQ8IWB1 547 aa7.58□□□□□ -1.2
CPSF7-213ENST00000494016 CCDC155Q8N6L0 562 aa7.58□□□□□ -1.2
CPSF7-213ENST00000494016 FAM200AQ8TCP9 573 aa7.58□□□□□ -1.2
CPSF7-213ENST00000494016 NIFKQ9BYG3 293 aaKnown RBP7.58□□□□□ -1.2
CPSF7-213ENST00000494016 MIS18AQ9NYP9 233 aa7.58□□□□□ -1.2
CPSF7-213ENST00000494016 ZMIZ1Q9ULJ6 1067 aa7.58□□□□□ -1.2
CPSF7-213ENST00000494016 KIAA0232Q92628 1395 aa7.58□□□□□ -1.2
CPSF7-213ENST00000494016 PPFIA3O75145 1194 aa7.57□□□□□ -1.2
CPSF7-213ENST00000494016 SLC9A9Q8IVB4 645 aa7.57□□□□□ -1.2
CPSF7-213ENST00000494016 SMC5Q8IY18 1101 aa7.57□□□□□ -1.2
CPSF7-213ENST00000494016 IL17REQ8NFR9 667 aa7.57□□□□□ -1.2
CPSF7-213ENST00000494016 TIMMDC1Q9NPL8 285 aa7.57□□□□□ -1.2
CPSF7-213ENST00000494016 NOP58Q9Y2X3 529 aaKnown RBP7.57□□□□□ -1.2
CPSF7-213ENST00000494016 DYRK1BQ9Y463 629 aa7.57□□□□□ -1.2
CPSF7-213ENST00000494016 NFAT5O94916 1531 aa7.57□□□□□ -1.2
CPSF7-213ENST00000494016 LTN1O94822 1766 aa7.56□□□□□ -1.2
CPSF7-213ENST00000494016 ABCC4O15439 1325 aa7.56□□□□□ -1.2
CPSF7-213ENST00000494016 USP19O94966 1318 aa7.56□□□□□ -1.2
CPSF7-213ENST00000494016 H3BM21 787 aa7.56□□□□□ -1.2
CPSF7-213ENST00000494016 PHKA2P46019 1235 aa7.56□□□□□ -1.2
CPSF7-213ENST00000494016 NBPF6Q5VWK0 638 aa7.56□□□□□ -1.2
CPSF7-213ENST00000494016 KRT28Q7Z3Y7 464 aa7.56□□□□□ -1.2
CPSF7-213ENST00000494016 GAS2L2Q8NHY3 880 aa7.56□□□□□ -1.2
CPSF7-213ENST00000494016 STK32AQ8WU08 396 aa7.56□□□□□ -1.2
CPSF7-213ENST00000494016 LTV1Q96GA3 475 aaPredicted RBP7.56□□□□□ -1.2
CPSF7-213ENST00000494016 NBPF4Q96M43 638 aa7.56□□□□□ -1.2
CPSF7-213ENST00000494016 TSPAN10Q9H1Z9 355 aaPredicted RBP7.56□□□□□ -1.2
CPSF7-213ENST00000494016 QTRT2Q9H974 415 aaKnown RBP7.56□□□□□ -1.2
CPSF7-213ENST00000494016 TRPM3Q9HCF6 1732 aaPredicted RBP7.55□□□□□ -1.2
CPSF7-213ENST00000494016 AFF2P51816 1311 aa7.55□□□□□ -1.2
CPSF7-213ENST00000494016 ERBB4Q15303 1308 aa7.55□□□□□ -1.2
CPSF7-213ENST00000494016 TEAD4Q15561 434 aa7.55□□□□□ -1.2
CPSF7-213ENST00000494016 INTS3Q68E01 1043 aaKnown RBP7.55□□□□□ -1.2
CPSF7-213ENST00000494016 ARHGEF25Q86VW2 580 aa7.55□□□□□ -1.2
CPSF7-213ENST00000494016 SIRT2Q8IXJ6 389 aa7.55□□□□□ -1.2
CPSF7-213ENST00000494016 KCNH5Q8NCM2 988 aa7.55□□□□□ -1.2
CPSF7-213ENST00000494016 RTF1Q92541 710 aaKnown RBP7.55□□□□□ -1.2
CPSF7-213ENST00000494016 API5Q9BZZ5 524 aaKnown RBP7.55□□□□□ -1.2
CPSF7-213ENST00000494016 RGPD2P0DJD1 1756 aa7.55□□□□□ -1.2
CPSF7-213ENST00000494016 RTL1A6NKG5 1358 aa7.55□□□□□ -1.2
CPSF7-213ENST00000494016 VIRMAQ69YN4 1812 aaKnown RBP7.55□□□□□ -1.2
CPSF7-213ENST00000494016 RGS12O14924 1447 aa7.54□□□□□ -1.2
CPSF7-213ENST00000494016 PHRF1Q9P1Y6 1649 aaKnown RBP7.54□□□□□ -1.2
CPSF7-213ENST00000494016 A0A1B0GTH6 734 aa7.54□□□□□ -1.2
CPSF7-213ENST00000494016 GNAT3A8MTJ3 354 aa7.54□□□□□ -1.2
CPSF7-213ENST00000494016 C21orf2O43822 256 aa7.54□□□□□ -1.2
CPSF7-213ENST00000494016 GCP02774 474 aa7.54□□□□□ -1.2
CPSF7-213ENST00000494016 ITGA6P23229 1130 aa7.54□□□□□ -1.2
CPSF7-213ENST00000494016 PLA2G4AP47712 749 aa7.54□□□□□ -1.2
CPSF7-213ENST00000494016 RBM6P78332 1123 aaKnown RBP7.54□□□□□ -1.2
CPSF7-213ENST00000494016 XPCQ01831 940 aaPredicted RBP7.54□□□□□ -1.2
CPSF7-213ENST00000494016 NUCB1Q02818 461 aa7.54□□□□□ -1.2
CPSF7-213ENST00000494016 TBCELQ5QJ74 424 aa7.54□□□□□ -1.2
CPSF7-213ENST00000494016 USHBP1Q8N6Y0 703 aa7.54□□□□□ -1.2
CPSF7-213ENST00000494016 ZDHHC1Q8WTX9 485 aa7.54□□□□□ -1.2
CPSF7-213ENST00000494016 HINFPQ9BQA5 517 aa7.54□□□□□ -1.2
CPSF7-213ENST00000494016 CRYBG1Q9Y4K1 1723 aa7.54□□□□□ -1.2
CPSF7-213ENST00000494016 PLCH1Q4KWH8 1693 aa7.54□□□□□ -1.2
CPSF7-213ENST00000494016 SLIT3O75094 1523 aa7.53□□□□□ -1.2
CPSF7-213ENST00000494016 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.53□□□□□ -1.2
CPSF7-213ENST00000494016 F11P03951 625 aa7.53□□□□□ -1.2
CPSF7-213ENST00000494016 PSMA6P60900 246 aaKnown RBP7.53□□□□□ -1.2
CPSF7-213ENST00000494016 TAF7Q15545 349 aaPredicted RBP7.53□□□□□ -1.2
CPSF7-213ENST00000494016 SWI5Q1ZZU3 235 aa7.53□□□□□ -1.2
CPSF7-213ENST00000494016 TMEM164Q5U3C3 297 aa7.53□□□□□ -1.2
CPSF7-213ENST00000494016 G2E3Q7L622 706 aa7.53□□□□□ -1.2
CPSF7-213ENST00000494016 CHMP4BQ9H444 224 aaKnown RBP7.53□□□□□ -1.2
CPSF7-213ENST00000494016 BABAM1Q9NWV8 329 aa7.53□□□□□ -1.2
CPSF7-213ENST00000494016 TSPYL4Q9UJ04 414 aa7.53□□□□□ -1.2
CPSF7-213ENST00000494016 ALS2Q96Q42 1657 aa7.53□□□□□ -1.2
CPSF7-213ENST00000494016 LRRC37A3O60309 1634 aa7.52□□□□□ -1.2
CPSF7-213ENST00000494016 IGFBP4P22692 258 aa7.52□□□□□ -1.21
CPSF7-213ENST00000494016 MSX1P28360 303 aa7.52□□□□□ -1.21
CPSF7-213ENST00000494016 NOS2P35228 1153 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms