RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 LPIN2Q92539 896 aa29.55■■■□□ 2.32
RHBDD3-206ENST00000493894 LRRFIP2Q9Y608 721 aaKnown RBP29.55■■■□□ 2.32
RHBDD3-206ENST00000493894 MAST3O60307 1309 aa29.54■■■□□ 2.32
RHBDD3-206ENST00000493894 MYH13Q9UKX3 1938 aa29.54■■■□□ 2.32
RHBDD3-206ENST00000493894 UNCXA6NJT0 531 aa29.54■■■□□ 2.32
RHBDD3-206ENST00000493894 IREB2P48200 963 aaKnown RBP29.54■■■□□ 2.32
RHBDD3-206ENST00000493894 HDLBPQ00341 1268 aaKnown RBP29.54■■■□□ 2.32
RHBDD3-206ENST00000493894 ATG9AQ7Z3C6 839 aa29.54■■■□□ 2.32
RHBDD3-206ENST00000493894 TEKT1Q969V4 418 aa29.54■■■□□ 2.32
RHBDD3-206ENST00000493894 SLC10A4Q96EP9 437 aa29.54■■■□□ 2.32
RHBDD3-206ENST00000493894 SIL1Q9H173 461 aa29.54■■■□□ 2.32
RHBDD3-206ENST00000493894 CIAO1O76071 339 aa29.53■■■□□ 2.32
RHBDD3-206ENST00000493894 TNNI2P48788 182 aa29.53■■■□□ 2.32
RHBDD3-206ENST00000493894 ARHGAP45Q92619 1136 aa29.53■■■□□ 2.32
RHBDD3-206ENST00000493894 ZBTB48P10074 688 aaPredicted RBP29.52■■■□□ 2.32
RHBDD3-206ENST00000493894 MEIS3Q99687 375 aa29.52■■■□□ 2.32
RHBDD3-206ENST00000493894 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.52■■■□□ 2.32
RHBDD3-206ENST00000493894 SUGT1Q9Y2Z0 365 aa29.52■■■□□ 2.32
RHBDD3-206ENST00000493894 TBC1D8O95759 1140 aa29.51■■■□□ 2.31
RHBDD3-206ENST00000493894 CLMNQ96JQ2 1002 aa29.51■■■□□ 2.31
RHBDD3-206ENST00000493894 MANSC4A6NHS7 340 aaPredicted RBP29.5■■■□□ 2.31
RHBDD3-206ENST00000493894 TCP10L2B9ZVM9 353 aa29.5■■■□□ 2.31
RHBDD3-206ENST00000493894 ATP2B3Q16720 1220 aa29.5■■■□□ 2.31
RHBDD3-206ENST00000493894 CTU1Q7Z7A3 348 aaKnown RBP29.5■■■□□ 2.31
RHBDD3-206ENST00000493894 ANKRD13AQ8IZ07 590 aa29.5■■■□□ 2.31
RHBDD3-206ENST00000493894 WNK4Q96J92 1243 aa29.5■■■□□ 2.31
RHBDD3-206ENST00000493894 CEP126Q9P2H0 1117 aa29.5■■■□□ 2.31
RHBDD3-206ENST00000493894 LAMB1P07942 1786 aa29.49■■■□□ 2.31
RHBDD3-206ENST00000493894 INTS3Q68E01 1043 aaKnown RBP29.49■■■□□ 2.31
RHBDD3-206ENST00000493894 OTOFQ9HC10 1997 aa29.49■■■□□ 2.31
RHBDD3-206ENST00000493894 USP2O75604 605 aaPredicted RBP29.48■■■□□ 2.31
RHBDD3-206ENST00000493894 GNAI3P08754 354 aa29.48■■■□□ 2.31
RHBDD3-206ENST00000493894 IL15P40933 162 aaPredicted RBP29.48■■■□□ 2.31
RHBDD3-206ENST00000493894 WDR66Q8TBY9 1149 aa29.48■■■□□ 2.31
RHBDD3-206ENST00000493894 ZDHHC15Q96MV8 337 aa29.48■■■□□ 2.31
RHBDD3-206ENST00000493894 TMOD2Q9NZR1 351 aa29.48■■■□□ 2.31
RHBDD3-206ENST00000493894 IPO8O15397 1037 aaKnown RBP29.47■■■□□ 2.31
RHBDD3-206ENST00000493894 ALDH1A1P00352 501 aa29.47■■■□□ 2.31
RHBDD3-206ENST00000493894 INHBEP58166 350 aa29.47■■■□□ 2.31
RHBDD3-206ENST00000493894 TEPSINQ96N21 525 aa29.47■■■□□ 2.31
RHBDD3-206ENST00000493894 MRIQ9BWK5 157 aa29.47■■■□□ 2.31
RHBDD3-206ENST00000493894 TMEM39BQ9GZU3 492 aa29.47■■■□□ 2.31
RHBDD3-206ENST00000493894 NOM1Q5C9Z4 860 aaKnown RBP29.46■■■□□ 2.31
RHBDD3-206ENST00000493894 CDAN1Q8IWY9 1227 aa29.46■■■□□ 2.31
RHBDD3-206ENST00000493894 ZNF296Q8WUU4 475 aaPredicted RBP29.46■■■□□ 2.31
RHBDD3-206ENST00000493894 CFHR5Q9BXR6 569 aa29.46■■■□□ 2.31
RHBDD3-206ENST00000493894 COPRSQ9NQ92 184 aa29.46■■■□□ 2.31
RHBDD3-206ENST00000493894 PA2G4Q9UQ80 394 aaKnown RBP29.46■■■□□ 2.31
RHBDD3-206ENST00000493894 GNL3LQ9NVN8 582 aaKnown RBP29.45■■■□□ 2.31
RHBDD3-206ENST00000493894 GPR25O00155 361 aa29.44■■■□□ 2.3
RHBDD3-206ENST00000493894 CACNB3P54284 484 aa29.44■■■□□ 2.3
RHBDD3-206ENST00000493894 HHIPL2Q6UWX4 724 aa29.44■■■□□ 2.3
RHBDD3-206ENST00000493894 TRIM27P14373 513 aa29.43■■■□□ 2.3
RHBDD3-206ENST00000493894 IFNL1Q8IU54 200 aa29.43■■■□□ 2.3
RHBDD3-206ENST00000493894 FRAT1Q92837 279 aaPredicted RBP29.43■■■□□ 2.3
RHBDD3-206ENST00000493894 APOBEC3HQ6NTF7 200 aaKnown RBP29.42■■■□□ 2.3
RHBDD3-206ENST00000493894 ATF7IPQ6VMQ6 1270 aa29.42■■■□□ 2.3
RHBDD3-206ENST00000493894 ELP3Q9H9T3 547 aa29.42■■■□□ 2.3
RHBDD3-206ENST00000493894 SEMA3EO15041 775 aa29.41■■■□□ 2.3
RHBDD3-206ENST00000493894 SRGAP3O43295 1099 aa29.41■■■□□ 2.3
RHBDD3-206ENST00000493894 FKBP1CQ5VVH2 108 aa29.41■■■□□ 2.3
RHBDD3-206ENST00000493894 FAM83AQ86UY5 434 aa29.41■■■□□ 2.3
RHBDD3-206ENST00000493894 BCAR3O75815 825 aa29.4■■■□□ 2.3
RHBDD3-206ENST00000493894 GJA5P36382 358 aa29.4■■■□□ 2.3
RHBDD3-206ENST00000493894 MTX1Q13505 466 aa29.4■■■□□ 2.3
RHBDD3-206ENST00000493894 OPTNQ96CV9 577 aa29.4■■■□□ 2.3
RHBDD3-206ENST00000493894 RPAP1Q9BWH6 1393 aaPredicted RBP29.39■■■□□ 2.3
RHBDD3-206ENST00000493894 IGF2BP3O00425 579 aaKnown RBP eCLIP29.39■■■□□ 2.3
RHBDD3-206ENST00000493894 FKTNO75072 461 aa29.39■■■□□ 2.3
RHBDD3-206ENST00000493894 PHKA1P46020 1223 aa29.39■■■□□ 2.3
RHBDD3-206ENST00000493894 RGS19P49795 217 aa29.39■■■□□ 2.3
RHBDD3-206ENST00000493894 HNRNPUQ00839 825 aaKnown RBP eCLIP29.39■■■□□ 2.3
RHBDD3-206ENST00000493894 PKN2Q16513 984 aaKnown RBP29.39■■■□□ 2.3
RHBDD3-206ENST00000493894 DENND2AQ9ULE3 1009 aa29.39■■■□□ 2.3
RHBDD3-206ENST00000493894 CSADQ9Y600 493 aa29.39■■■□□ 2.3
RHBDD3-206ENST00000493894 PRDX5P30044 214 aa29.38■■■□□ 2.29
RHBDD3-206ENST00000493894 MLLT1Q03111 559 aaPredicted RBP29.38■■■□□ 2.29
RHBDD3-206ENST00000493894 OTUD7BQ6GQQ9 843 aa29.38■■■□□ 2.29
RHBDD3-206ENST00000493894 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.38■■■□□ 2.29
RHBDD3-206ENST00000493894 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.38■■■□□ 2.29
RHBDD3-206ENST00000493894 HOOK2Q96ED9 719 aa29.38■■■□□ 2.29
RHBDD3-206ENST00000493894 SALL1Q9NSC2 1324 aa29.38■■■□□ 2.29
RHBDD3-206ENST00000493894 LDHBP07195 334 aaKnown RBP29.37■■■□□ 2.29
RHBDD3-206ENST00000493894 MAP3K9P80192 1104 aa29.37■■■□□ 2.29
RHBDD3-206ENST00000493894 VGLL4Q14135 290 aa29.37■■■□□ 2.29
RHBDD3-206ENST00000493894 MIER1Q8N108 512 aa29.37■■■□□ 2.29
RHBDD3-206ENST00000493894 CLUAP1Q96AJ1 413 aa29.37■■■□□ 2.29
RHBDD3-206ENST00000493894 R3HDMLQ9H3Y0 253 aa29.37■■■□□ 2.29
RHBDD3-206ENST00000493894 TNNQ9UQP3 1299 aa29.37■■■□□ 2.29
RHBDD3-206ENST00000493894 DAGLAQ9Y4D2 1042 aa29.37■■■□□ 2.29
RHBDD3-206ENST00000493894 ADORA1P30542 326 aa29.36■■■□□ 2.29
RHBDD3-206ENST00000493894 DIXDC1Q155Q3 683 aa29.36■■■□□ 2.29
RHBDD3-206ENST00000493894 CCDC102BQ68D86 513 aa29.36■■■□□ 2.29
RHBDD3-206ENST00000493894 ZBTB22O15209 634 aa29.35■■■□□ 2.29
RHBDD3-206ENST00000493894 GNAI2P04899 355 aa29.35■■■□□ 2.29
RHBDD3-206ENST00000493894 DIEXFQ68CQ4 756 aaKnown RBP29.35■■■□□ 2.29
RHBDD3-206ENST00000493894 AKAP2Q9Y2D5 859 aa29.35■■■□□ 2.29
RHBDD3-206ENST00000493894 ZKSCAN2Q63HK3 967 aa29.34■■■□□ 2.29
RHBDD3-206ENST00000493894 ZGPATQ8N5A5 531 aaKnown RBP29.34■■■□□ 2.29
RHBDD3-206ENST00000493894 HPS5Q9UPZ3 1129 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms