RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 USP21Q9UK80 565 aa16.18■□□□□ 0.18
VCP-207ENST00000493886 CTDNEP1O95476 244 aa16.18■□□□□ 0.18
VCP-207ENST00000493886 PDIA3P30101 505 aaKnown RBP16.18■□□□□ 0.18
VCP-207ENST00000493886 CCDC183Q5T5S1 534 aa16.18■□□□□ 0.18
VCP-207ENST00000493886 MB21D2Q8IYB1 491 aaPredicted RBP16.18■□□□□ 0.18
VCP-207ENST00000493886 CDC5LQ99459 802 aaKnown RBP16.18■□□□□ 0.18
VCP-207ENST00000493886 UQCRHLA0A096LP55 91 aa16.17■□□□□ 0.18
VCP-207ENST00000493886 UQCRHP07919 91 aa16.17■□□□□ 0.18
VCP-207ENST00000493886 HMGN5P82970 282 aaKnown RBP16.17■□□□□ 0.18
VCP-207ENST00000493886 NCOA7Q8NI08 942 aa16.17■□□□□ 0.18
VCP-207ENST00000493886 MCM5P33992 734 aa16.17■□□□□ 0.18
VCP-207ENST00000493886 PTPDC1A2A3K4 754 aa16.16■□□□□ 0.18
VCP-207ENST00000493886 H3BQV1 296 aa16.16■□□□□ 0.18
VCP-207ENST00000493886 PRC1O43663 620 aa16.16■□□□□ 0.18
VCP-207ENST00000493886 BCAMP50895 628 aa16.16■□□□□ 0.18
VCP-207ENST00000493886 EVCP57679 992 aa16.16■□□□□ 0.18
VCP-207ENST00000493886 MAP3K12Q12852 859 aa16.16■□□□□ 0.18
VCP-207ENST00000493886 IFFO2Q5TF58 517 aa16.16■□□□□ 0.18
VCP-207ENST00000493886 BICDL1Q6ZP65 573 aa16.16■□□□□ 0.18
VCP-207ENST00000493886 SMIM5Q71RC9 77 aa16.16■□□□□ 0.18
VCP-207ENST00000493886 RALYLQ86SE5 291 aaKnown RBP16.16■□□□□ 0.18
VCP-207ENST00000493886 TTC6Q86TZ1 520 aa16.16■□□□□ 0.18
VCP-207ENST00000493886 NCOA5Q9HCD5 579 aaKnown RBP16.16■□□□□ 0.18
VCP-207ENST00000493886 GPHNQ9NQX3 736 aaPredicted RBP16.16■□□□□ 0.18
VCP-207ENST00000493886 APPP05067 770 aa16.16■□□□□ 0.18
VCP-207ENST00000493886 SF3B3Q15393 1217 aaKnown RBP16.16■□□□□ 0.18
VCP-207ENST00000493886 C3orf67Q6ZVT6 689 aa16.16■□□□□ 0.18
VCP-207ENST00000493886 AIDAQ96BJ3 306 aa16.16■□□□□ 0.18
VCP-207ENST00000493886 TTC12Q9H892 705 aaPredicted RBP16.16■□□□□ 0.18
VCP-207ENST00000493886 COL4A1P02462 1669 aa16.16■□□□□ 0.18
VCP-207ENST00000493886 RGL2O15211 777 aa16.15■□□□□ 0.18
VCP-207ENST00000493886 RC3H1Q5TC82 1133 aaKnown RBP16.15■□□□□ 0.18
VCP-207ENST00000493886 MAGEB6Q8N7X4 407 aa16.15■□□□□ 0.18
VCP-207ENST00000493886 STRBPQ96SI9 672 aaKnown RBP16.15■□□□□ 0.18
VCP-207ENST00000493886 ELP1O95163 1332 aa16.15■□□□□ 0.18
VCP-207ENST00000493886 DOCK2Q92608 1830 aa16.15■□□□□ 0.18
VCP-207ENST00000493886 CDK11BP21127 795 aaKnown RBP16.15■□□□□ 0.18
VCP-207ENST00000493886 ANTXR2P58335 489 aa16.15■□□□□ 0.18
VCP-207ENST00000493886 RESTQ13127 1097 aa16.15■□□□□ 0.18
VCP-207ENST00000493886 DNTTIP2Q5QJE6 756 aaKnown RBP16.15■□□□□ 0.18
VCP-207ENST00000493886 TBC1D9BQ66K14 1250 aa16.15■□□□□ 0.18
VCP-207ENST00000493886 ANKRD18AQ8IVF6 992 aa16.15■□□□□ 0.18
VCP-207ENST00000493886 CHMP4CQ96CF2 233 aa16.15■□□□□ 0.18
VCP-207ENST00000493886 BCL2L12Q9HB09 334 aa16.15■□□□□ 0.18
VCP-207ENST00000493886 KIF3AQ9Y496 699 aa16.15■□□□□ 0.18
VCP-207ENST00000493886 BTAF1O14981 1849 aa16.15■□□□□ 0.18
VCP-207ENST00000493886 SPATA31A6Q5VVP1 1343 aa16.15■□□□□ 0.18
VCP-207ENST00000493886 RPS6KA4O75676 772 aa16.15■□□□□ 0.18
VCP-207ENST00000493886 ADCY5O95622 1261 aa16.15■□□□□ 0.18
VCP-207ENST00000493886 SCAND2PQ9GZW5 306 aaPredicted RBP16.15■□□□□ 0.18
VCP-207ENST00000493886 NBPF3Q9H094 633 aa16.15■□□□□ 0.18
VCP-207ENST00000493886 SCN7AQ01118 1682 aa16.15■□□□□ 0.18
VCP-207ENST00000493886 SALL1Q9NSC2 1324 aa16.14■□□□□ 0.18
VCP-207ENST00000493886 NARFQ9UHQ1 456 aa16.14■□□□□ 0.17
VCP-207ENST00000493886 THSD7AQ9UPZ6 1657 aa16.14■□□□□ 0.17
VCP-207ENST00000493886 LETM1O95202 739 aaPredicted RBP16.14■□□□□ 0.17
VCP-207ENST00000493886 ZSCAN16Q9H4T2 348 aaPredicted RBP16.14■□□□□ 0.17
VCP-207ENST00000493886 TFIP11Q9UBB9 837 aaKnown RBP16.14■□□□□ 0.17
VCP-207ENST00000493886 WDR19Q8NEZ3 1342 aa16.14■□□□□ 0.17
VCP-207ENST00000493886 TRDNQ13061 729 aa16.13■□□□□ 0.17
VCP-207ENST00000493886 FAM182BQ5T319 152 aa16.13■□□□□ 0.17
VCP-207ENST00000493886 NAA16Q6N069 864 aaPredicted RBP16.13■□□□□ 0.17
VCP-207ENST00000493886 TBC1D10CQ8IV04 446 aa16.13■□□□□ 0.17
VCP-207ENST00000493886 SLC10A5Q5PT55 438 aa16.13■□□□□ 0.17
VCP-207ENST00000493886 SPATA32Q96LK8 384 aa16.13■□□□□ 0.17
VCP-207ENST00000493886 SRP68Q9UHB9 627 aaKnown RBP16.13■□□□□ 0.17
VCP-207ENST00000493886 KLF18A0A0U1RQI7 1052 aa16.12■□□□□ 0.17
VCP-207ENST00000493886 GNPATO15228 680 aa16.12■□□□□ 0.17
VCP-207ENST00000493886 MBD4O95243 580 aa16.12■□□□□ 0.17
VCP-207ENST00000493886 ALX1Q15699 326 aa16.12■□□□□ 0.17
VCP-207ENST00000493886 BSDC1Q9NW68 430 aaPredicted RBP16.12■□□□□ 0.17
VCP-207ENST00000493886 CCNL1Q9UK58 526 aaPredicted RBP16.12■□□□□ 0.17
VCP-207ENST00000493886 NHSQ6T4R5 1651 aa16.12■□□□□ 0.17
VCP-207ENST00000493886 FOSBP53539 338 aa16.12■□□□□ 0.17
VCP-207ENST00000493886 KIAA2012Q0VF49 1180 aa16.12■□□□□ 0.17
VCP-207ENST00000493886 CAMK4Q16566 473 aa16.12■□□□□ 0.17
VCP-207ENST00000493886 LEO1Q8WVC0 666 aaPredicted RBP16.12■□□□□ 0.17
VCP-207ENST00000493886 TAF1P21675 1872 aa16.12■□□□□ 0.17
VCP-207ENST00000493886 PATL2C9JE40 543 aaKnown RBP16.12■□□□□ 0.17
VCP-207ENST00000493886 DENND2AQ9ULE3 1009 aa16.12■□□□□ 0.17
VCP-207ENST00000493886 CASZ1Q86V15 1759 aa16.11■□□□□ 0.17
VCP-207ENST00000493886 ZMYM6O95789 1325 aa16.11■□□□□ 0.17
VCP-207ENST00000493886 PPFIA3O75145 1194 aa16.11■□□□□ 0.17
VCP-207ENST00000493886 ZPR1O75312 459 aa16.11■□□□□ 0.17
VCP-207ENST00000493886 SETDB2Q96T68 719 aa16.11■□□□□ 0.17
VCP-207ENST00000493886 NYXQ9GZU5 481 aa16.11■□□□□ 0.17
VCP-207ENST00000493886 ARMT1Q9H993 441 aa16.11■□□□□ 0.17
VCP-207ENST00000493886 GOLGA8BA8MQT2 603 aa16.11■□□□□ 0.17
VCP-207ENST00000493886 UBE4AQ14139 1066 aa16.11■□□□□ 0.17
VCP-207ENST00000493886 IFNL3Q8IZI9 196 aa16.11■□□□□ 0.17
VCP-207ENST00000493886 EPB41L4AQ9HCS5 686 aaPredicted RBP16.11■□□□□ 0.17
VCP-207ENST00000493886 HPS5Q9UPZ3 1129 aa16.11■□□□□ 0.17
VCP-207ENST00000493886 CARMIL3Q8ND23 1372 aa16.1■□□□□ 0.17
VCP-207ENST00000493886 ZNF804BA4D1E1 1349 aa16.1■□□□□ 0.17
VCP-207ENST00000493886 SPC24Q8NBT2 197 aa16.1■□□□□ 0.17
VCP-207ENST00000493886 LRP2BPQ9P2M1 347 aa16.1■□□□□ 0.17
VCP-207ENST00000493886 MINPP1Q9UNW1 487 aa16.1■□□□□ 0.17
VCP-207ENST00000493886 IQSEC3Q9UPP2 1182 aaPredicted RBP16.1■□□□□ 0.17
VCP-207ENST00000493886 RTCBQ9Y3I0 505 aaKnown RBP16.1■□□□□ 0.17
VCP-207ENST00000493886 FDPSP14324 419 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms