RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 PUS7LQ9H0K6 701 aaKnown RBP15.22■□□□□ 0.03
VPS52-220ENST00000493674 VPS33BQ9H267 617 aa15.22■□□□□ 0.03
VPS52-220ENST00000493674 RIMBP2O15034 1052 aa15.21■□□□□ 0.03
VPS52-220ENST00000493674 FRAT2O75474 233 aaPredicted RBP15.21■□□□□ 0.03
VPS52-220ENST00000493674 YBX3P16989 372 aaKnown RBP eCLIP15.21■□□□□ 0.03
VPS52-220ENST00000493674 ANAPC15P60006 121 aa15.21■□□□□ 0.03
VPS52-220ENST00000493674 CHAF1AQ13111 956 aaPredicted RBP15.21■□□□□ 0.03
VPS52-220ENST00000493674 CCDC129Q6ZRS4 1044 aa15.21■□□□□ 0.03
VPS52-220ENST00000493674 PODNQ7Z5L7 613 aa15.21■□□□□ 0.03
VPS52-220ENST00000493674 MAGEB6Q8N7X4 407 aa15.21■□□□□ 0.03
VPS52-220ENST00000493674 NSUN4Q96CB9 384 aaKnown RBP15.21■□□□□ 0.03
VPS52-220ENST00000493674 DSCC1Q9BVC3 393 aa15.21■□□□□ 0.03
VPS52-220ENST00000493674 LRP2BPQ9P2M1 347 aa15.21■□□□□ 0.03
VPS52-220ENST00000493674 ZNF219Q9P2Y4 722 aaPredicted RBP15.21■□□□□ 0.03
VPS52-220ENST00000493674 LTBP3Q9NS15 1303 aa15.2■□□□□ 0.02
VPS52-220ENST00000493674 PRDX5P30044 214 aa15.2■□□□□ 0.02
VPS52-220ENST00000493674 NECTIN1Q15223 517 aa15.2■□□□□ 0.02
VPS52-220ENST00000493674 SPTY2D1Q68D10 685 aaPredicted RBP15.2■□□□□ 0.02
VPS52-220ENST00000493674 KIAA1211Q6ZU35 1233 aa15.2■□□□□ 0.02
VPS52-220ENST00000493674 ERICH6Q7L0X2 663 aa15.2■□□□□ 0.02
VPS52-220ENST00000493674 ADGRA1Q86SQ6 560 aa15.2■□□□□ 0.02
VPS52-220ENST00000493674 TBC1D22AQ8WUA7 517 aa15.2■□□□□ 0.02
VPS52-220ENST00000493674 ABCF2Q9UG63 623 aa15.2■□□□□ 0.02
VPS52-220ENST00000493674 GPAA1O43292 621 aa15.19■□□□□ 0.02
VPS52-220ENST00000493674 FKBP1AP62942 108 aaKnown RBP15.19■□□□□ 0.02
VPS52-220ENST00000493674 MECOMQ03112 1051 aa15.19■□□□□ 0.02
VPS52-220ENST00000493674 GRIK5Q16478 980 aa15.19■□□□□ 0.02
VPS52-220ENST00000493674 PALD1Q9ULE6 856 aa15.19■□□□□ 0.02
VPS52-220ENST00000493674 SUGT1Q9Y2Z0 365 aa15.19■□□□□ 0.02
VPS52-220ENST00000493674 RBM8AQ9Y5S9 174 aaKnown RBP15.19■□□□□ 0.02
VPS52-220ENST00000493674 ZMYM6O95789 1325 aa15.18■□□□□ 0.02
VPS52-220ENST00000493674 NFKBIEO00221 500 aa15.18■□□□□ 0.02
VPS52-220ENST00000493674 ECE2O60344 883 aa15.18■□□□□ 0.02
VPS52-220ENST00000493674 HSPD1P10809 573 aaKnown RBP15.18■□□□□ 0.02
VPS52-220ENST00000493674 MCCP23508 829 aa15.18■□□□□ 0.02
VPS52-220ENST00000493674 AOC3Q16853 763 aa15.18■□□□□ 0.02
VPS52-220ENST00000493674 DOK7Q18PE1 504 aa15.18■□□□□ 0.02
VPS52-220ENST00000493674 VPS53Q5VIR6 699 aa15.18■□□□□ 0.02
VPS52-220ENST00000493674 STRBPQ96SI9 672 aaKnown RBP15.18■□□□□ 0.02
VPS52-220ENST00000493674 RIOK1Q9BRS2 568 aaKnown RBP15.18■□□□□ 0.02
VPS52-220ENST00000493674 RAI14Q9P0K7 980 aa15.18■□□□□ 0.02
VPS52-220ENST00000493674 JAG2Q9Y219 1238 aa15.18■□□□□ 0.02
VPS52-220ENST00000493674 BCS1LQ9Y276 419 aa15.18■□□□□ 0.02
VPS52-220ENST00000493674 SIPA1L1O43166 1804 aa15.17■□□□□ 0.02
VPS52-220ENST00000493674 RPAP1Q9BWH6 1393 aaPredicted RBP15.17■□□□□ 0.02
VPS52-220ENST00000493674 PPIP5K2O43314 1243 aa15.17■□□□□ 0.02
VPS52-220ENST00000493674 LDHBP07195 334 aaKnown RBP15.17■□□□□ 0.02
VPS52-220ENST00000493674 CYP7A1P22680 504 aa15.17■□□□□ 0.02
VPS52-220ENST00000493674 ANP32AP39687 249 aaKnown RBP15.17■□□□□ 0.02
VPS52-220ENST00000493674 MFSD14BQ5SR56 506 aa15.17■□□□□ 0.02
VPS52-220ENST00000493674 NAA16Q6N069 864 aaPredicted RBP15.17■□□□□ 0.02
VPS52-220ENST00000493674 CERS5Q8N5B7 392 aa15.17■□□□□ 0.02
VPS52-220ENST00000493674 DBNDD1Q9H9R9 158 aa15.17■□□□□ 0.02
VPS52-220ENST00000493674 U3KPZ7 1027 aaPredicted RBP15.17■□□□□ 0.02
VPS52-220ENST00000493674 GAKO14976 1311 aa15.17■□□□□ 0.02
VPS52-220ENST00000493674 YDJCA8MPS7 323 aa15.16■□□□□ 0.02
VPS52-220ENST00000493674 MBD4O95243 580 aa15.16■□□□□ 0.02
VPS52-220ENST00000493674 GTF2IP78347 998 aa15.16■□□□□ 0.02
VPS52-220ENST00000493674 ALX1Q15699 326 aa15.16■□□□□ 0.02
VPS52-220ENST00000493674 TSGA10IPQ3SY00 556 aa15.16■□□□□ 0.02
VPS52-220ENST00000493674 DACT2Q5SW24 774 aa15.16■□□□□ 0.02
VPS52-220ENST00000493674 STRIP1Q5VSL9 837 aa15.16■□□□□ 0.02
VPS52-220ENST00000493674 RASEFQ8IZ41 740 aa15.16■□□□□ 0.02
VPS52-220ENST00000493674 SNX14Q9Y5W7 946 aa15.16■□□□□ 0.02
VPS52-220ENST00000493674 SLC27A2O14975 620 aa15.15■□□□□ 0.02
VPS52-220ENST00000493674 IARSP41252 1262 aaKnown RBP15.15■□□□□ 0.02
VPS52-220ENST00000493674 CREB3L3Q68CJ9 461 aa15.15■□□□□ 0.02
VPS52-220ENST00000493674 TTLL5Q6EMB2 1281 aa15.15■□□□□ 0.02
VPS52-220ENST00000493674 DZIP1Q86YF9 867 aaKnown RBP15.15■□□□□ 0.02
VPS52-220ENST00000493674 LCORLQ8N3X6 602 aa15.15■□□□□ 0.02
VPS52-220ENST00000493674 AIDAQ96BJ3 306 aa15.15■□□□□ 0.02
VPS52-220ENST00000493674 FAM163AQ96GL9 167 aaPredicted RBP15.15■□□□□ 0.02
VPS52-220ENST00000493674 TAOK3Q9H2K8 898 aa15.15■□□□□ 0.02
VPS52-220ENST00000493674 MROH7-TTC4A0A0A0MT08 1334 aa15.15■□□□□ 0.02
VPS52-220ENST00000493674 GNAT2P19087 354 aa15.14■□□□□ 0.01
VPS52-220ENST00000493674 PPP4CP60510 307 aa15.14■□□□□ 0.01
VPS52-220ENST00000493674 GSTO1P78417 241 aa15.14■□□□□ 0.01
VPS52-220ENST00000493674 RABEP1Q15276 862 aa15.14■□□□□ 0.01
VPS52-220ENST00000493674 ARMT1Q9H993 441 aa15.14■□□□□ 0.01
VPS52-220ENST00000493674 EPB41L4AQ9HCS5 686 aaPredicted RBP15.14■□□□□ 0.01
VPS52-220ENST00000493674 KCNQ5Q9NR82 932 aa15.14■□□□□ 0.01
VPS52-220ENST00000493674 ZNF277Q9NRM2 450 aaPredicted RBP15.14■□□□□ 0.01
VPS52-220ENST00000493674 MAGEB6P1A0A0J9YX57 407 aa15.13■□□□□ 0.01
VPS52-220ENST00000493674 USP17L3A6NCW0 530 aa15.13■□□□□ 0.01
VPS52-220ENST00000493674 USP17L4A6NCW7 530 aa15.13■□□□□ 0.01
VPS52-220ENST00000493674 USP17L1Q7RTZ2 530 aa15.13■□□□□ 0.01
VPS52-220ENST00000493674 MIGA1Q8NAN2 632 aa15.13■□□□□ 0.01
VPS52-220ENST00000493674 IL27Q8NEV9 243 aa15.13■□□□□ 0.01
VPS52-220ENST00000493674 TM6SF1Q9BZW5 370 aa15.13■□□□□ 0.01
VPS52-220ENST00000493674 GSG1L2A8MUP6 293 aa15.12■□□□□ 0.01
VPS52-220ENST00000493674 G3V3G9 751 aa15.12■□□□□ 0.01
VPS52-220ENST00000493674 FGAP02671 866 aa15.12■□□□□ 0.01
VPS52-220ENST00000493674 LDHCP07864 332 aa15.12■□□□□ 0.01
VPS52-220ENST00000493674 CYP21A2P08686 494 aa15.12■□□□□ 0.01
VPS52-220ENST00000493674 PRELPP51888 382 aa15.12■□□□□ 0.01
VPS52-220ENST00000493674 DIXDC1Q155Q3 683 aa15.12■□□□□ 0.01
VPS52-220ENST00000493674 DCAF8Q5TAQ9 597 aa15.12■□□□□ 0.01
VPS52-220ENST00000493674 RNF20Q5VTR2 975 aa15.12■□□□□ 0.01
VPS52-220ENST00000493674 LARGE2Q8N3Y3 721 aa15.12■□□□□ 0.01
VPS52-220ENST00000493674 SNX21Q969T3 373 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms