RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 PRMT6Q96LA8 375 aaPredicted RBP8.61□□□□□ -1.03
TOP3A-207ENST00000493648 GBA2Q9HCG7 927 aaPredicted RBP8.61□□□□□ -1.03
TOP3A-207ENST00000493648 GPR108Q9NPR9 543 aa8.61□□□□□ -1.03
TOP3A-207ENST00000493648 NOP58Q9Y2X3 529 aaKnown RBP8.61□□□□□ -1.03
TOP3A-207ENST00000493648 MAST3O60307 1309 aa8.6□□□□□ -1.03
TOP3A-207ENST00000493648 WDR33Q9C0J8 1336 aaKnown RBP8.6□□□□□ -1.03
TOP3A-207ENST00000493648 SPDYE2BA6NHP3 402 aa8.6□□□□□ -1.03
TOP3A-207ENST00000493648 ZBTB22O15209 634 aa8.6□□□□□ -1.03
TOP3A-207ENST00000493648 HMMRO75330 724 aa8.6□□□□□ -1.03
TOP3A-207ENST00000493648 SPDYE6P0CI01 402 aa8.6□□□□□ -1.03
TOP3A-207ENST00000493648 ADORA1P30542 326 aa8.6□□□□□ -1.03
TOP3A-207ENST00000493648 PHKA1P46020 1223 aa8.6□□□□□ -1.03
TOP3A-207ENST00000493648 CRKP46108 304 aa8.6□□□□□ -1.03
TOP3A-207ENST00000493648 FKBP1BP68106 108 aa8.6□□□□□ -1.03
TOP3A-207ENST00000493648 HSP90AB4PQ58FF6 505 aa8.6□□□□□ -1.03
TOP3A-207ENST00000493648 ERC1Q8IUD2 1116 aa8.6□□□□□ -1.03
TOP3A-207ENST00000493648 ZGPATQ8N5A5 531 aaKnown RBP8.6□□□□□ -1.03
TOP3A-207ENST00000493648 TEKT1Q969V4 418 aa8.6□□□□□ -1.03
TOP3A-207ENST00000493648 ZBTB40Q9NUA8 1239 aa8.6□□□□□ -1.03
TOP3A-207ENST00000493648 MYH13Q9UKX3 1938 aa8.59□□□□□ -1.03
TOP3A-207ENST00000493648 LDHBP07195 334 aaKnown RBP8.59□□□□□ -1.03
TOP3A-207ENST00000493648 TNNI2P48788 182 aa8.59□□□□□ -1.03
TOP3A-207ENST00000493648 HUNKP57058 714 aa8.59□□□□□ -1.03
TOP3A-207ENST00000493648 GRM1Q13255 1194 aa8.59□□□□□ -1.03
TOP3A-207ENST00000493648 TNFAIP1Q13829 316 aa8.59□□□□□ -1.03
TOP3A-207ENST00000493648 GRIK5Q16478 980 aa8.59□□□□□ -1.03
TOP3A-207ENST00000493648 CCDC158Q5M9N0 1113 aa8.59□□□□□ -1.03
TOP3A-207ENST00000493648 C20orf194Q5TEA3 1177 aa8.59□□□□□ -1.03
TOP3A-207ENST00000493648 PRAMEF18Q5VWM3 479 aa8.59□□□□□ -1.03
TOP3A-207ENST00000493648 SPTY2D1Q68D10 685 aaPredicted RBP8.59□□□□□ -1.03
TOP3A-207ENST00000493648 CYP4F22Q6NT55 531 aa8.59□□□□□ -1.03
TOP3A-207ENST00000493648 DEFB129Q9H1M3 183 aa8.59□□□□□ -1.03
TOP3A-207ENST00000493648 TDRD3Q9H7E2 651 aaKnown RBP8.59□□□□□ -1.03
TOP3A-207ENST00000493648 VEZTQ9HBM0 779 aa8.59□□□□□ -1.03
TOP3A-207ENST00000493648 SCAF8Q9UPN6 1271 aaKnown RBP8.59□□□□□ -1.03
TOP3A-207ENST00000493648 PCDHAC2Q9Y5I4 1007 aa8.59□□□□□ -1.03
TOP3A-207ENST00000493648 PPP2R3BQ9Y5P8 575 aa8.59□□□□□ -1.03
TOP3A-207ENST00000493648 SALL1Q9NSC2 1324 aa8.58□□□□□ -1.04
TOP3A-207ENST00000493648 CLRN2A0PK11 232 aa8.58□□□□□ -1.04
TOP3A-207ENST00000493648 UQCRFS1P1P0C7P4 283 aa8.58□□□□□ -1.04
TOP3A-207ENST00000493648 MAP2K2P36507 400 aa8.58□□□□□ -1.04
TOP3A-207ENST00000493648 MAP2K1Q02750 393 aaPredicted RBP8.58□□□□□ -1.04
TOP3A-207ENST00000493648 RASGRF1Q13972 1273 aa8.58□□□□□ -1.04
TOP3A-207ENST00000493648 TTLL12Q14166 644 aaPredicted RBP8.58□□□□□ -1.04
TOP3A-207ENST00000493648 SUPT20HL1Q3ZLR7 823 aa8.58□□□□□ -1.04
TOP3A-207ENST00000493648 TNNI3KQ59H18 835 aa8.58□□□□□ -1.04
TOP3A-207ENST00000493648 RGMBQ6NW40 437 aa8.58□□□□□ -1.04
TOP3A-207ENST00000493648 HHIPL2Q6UWX4 724 aa8.58□□□□□ -1.04
TOP3A-207ENST00000493648 SLF2Q8IX21 1173 aa8.58□□□□□ -1.04
TOP3A-207ENST00000493648 CCDC102AQ96A19 550 aa8.58□□□□□ -1.04
TOP3A-207ENST00000493648 CAPNS2Q96L46 248 aa8.58□□□□□ -1.04
TOP3A-207ENST00000493648 ZDHHC15Q96MV8 337 aa8.58□□□□□ -1.04
TOP3A-207ENST00000493648 ZNF70Q9UC06 446 aaPredicted RBP8.58□□□□□ -1.04
TOP3A-207ENST00000493648 ABCF2Q9UG63 623 aa8.58□□□□□ -1.04
TOP3A-207ENST00000493648 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.58□□□□□ -1.04
TOP3A-207ENST00000493648 FPGT-TNNI3KV9GXZ4 949 aa8.58□□□□□ -1.04
TOP3A-207ENST00000493648 PDS5AQ29RF7 1337 aaKnown RBP8.57□□□□□ -1.04
TOP3A-207ENST00000493648 ECM29Q5VYK3 1845 aa8.57□□□□□ -1.04
TOP3A-207ENST00000493648 RAB11FIP3O75154 756 aa8.57□□□□□ -1.04
TOP3A-207ENST00000493648 MYCNP04198 464 aaPredicted RBP8.57□□□□□ -1.04
TOP3A-207ENST00000493648 ARID4AP29374 1257 aaPredicted RBP8.57□□□□□ -1.04
TOP3A-207ENST00000493648 ZNF157P51786 506 aaPredicted RBP8.57□□□□□ -1.04
TOP3A-207ENST00000493648 SPDYE2Q495Y8 402 aa8.57□□□□□ -1.04
TOP3A-207ENST00000493648 TTC39AQ5SRH9 613 aa8.57□□□□□ -1.04
TOP3A-207ENST00000493648 ARMC9Q7Z3E5 817 aa8.57□□□□□ -1.04
TOP3A-207ENST00000493648 SPATA5Q8NB90 893 aa8.57□□□□□ -1.04
TOP3A-207ENST00000493648 AIDAQ96BJ3 306 aa8.57□□□□□ -1.04
TOP3A-207ENST00000493648 BEGAINQ9BUH8 593 aa8.57□□□□□ -1.04
TOP3A-207ENST00000493648 TMOD2Q9NZR1 351 aa8.57□□□□□ -1.04
TOP3A-207ENST00000493648 EXOC6BQ9Y2D4 811 aa8.57□□□□□ -1.04
TOP3A-207ENST00000493648 ARAP2Q8WZ64 1704 aa8.57□□□□□ -1.04
TOP3A-207ENST00000493648 COL1A1P02452 1464 aaPredicted RBP8.57□□□□□ -1.04
TOP3A-207ENST00000493648 TCP10L2B9ZVM9 353 aa8.56□□□□□ -1.04
TOP3A-207ENST00000493648 PPP1R12BO60237 982 aaPredicted RBP8.56□□□□□ -1.04
TOP3A-207ENST00000493648 LDHCP07864 332 aa8.56□□□□□ -1.04
TOP3A-207ENST00000493648 HSPA1AP0DMV8 641 aaKnown RBP8.56□□□□□ -1.04
TOP3A-207ENST00000493648 HSPA1BP0DMV9 641 aaKnown RBP8.56□□□□□ -1.04
TOP3A-207ENST00000493648 PRDX5P30044 214 aa8.56□□□□□ -1.04
TOP3A-207ENST00000493648 NOGQ13253 232 aa8.56□□□□□ -1.04
TOP3A-207ENST00000493648 RASA3Q14644 834 aa8.56□□□□□ -1.04
TOP3A-207ENST00000493648 FKBP1CQ5VVH2 108 aa8.56□□□□□ -1.04
TOP3A-207ENST00000493648 APOBEC3HQ6NTF7 200 aaKnown RBP8.56□□□□□ -1.04
TOP3A-207ENST00000493648 ERICH6Q7L0X2 663 aa8.56□□□□□ -1.04
TOP3A-207ENST00000493648 DZIP1Q86YF9 867 aaKnown RBP8.56□□□□□ -1.04
TOP3A-207ENST00000493648 SIRT2Q8IXJ6 389 aa8.56□□□□□ -1.04
TOP3A-207ENST00000493648 CLASRPQ8N2M8 674 aaKnown RBP8.56□□□□□ -1.04
TOP3A-207ENST00000493648 RHPN1Q8TCX5 695 aa8.56□□□□□ -1.04
TOP3A-207ENST00000493648 ZNF512BQ96KM6 892 aaPredicted RBP8.56□□□□□ -1.04
TOP3A-207ENST00000493648 DBNDD2Q9BQY9 259 aa8.56□□□□□ -1.04
TOP3A-207ENST00000493648 CCDC8Q9H0W5 538 aaPredicted RBP8.56□□□□□ -1.04
TOP3A-207ENST00000493648 HMG20BQ9P0W2 317 aa8.56□□□□□ -1.04
TOP3A-207ENST00000493648 CEP350Q5VT06 3117 aa8.55□□□□□ -1.04
TOP3A-207ENST00000493648 UBE2Q2LH0YL09 131 aa8.55□□□□□ -1.04
TOP3A-207ENST00000493648 APBB1O00213 710 aa8.55□□□□□ -1.04
TOP3A-207ENST00000493648 AOC2O75106 756 aa8.55□□□□□ -1.04
TOP3A-207ENST00000493648 RRP1P56182 461 aaKnown RBP8.55□□□□□ -1.04
TOP3A-207ENST00000493648 GSTO1P78417 241 aa8.55□□□□□ -1.04
TOP3A-207ENST00000493648 PRKG1Q13976 671 aa8.55□□□□□ -1.04
TOP3A-207ENST00000493648 DIXDC1Q155Q3 683 aa8.55□□□□□ -1.04
TOP3A-207ENST00000493648 MOB2Q70IA6 237 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms