RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 EFCC1Q9HA90 598 aa15.59■□□□□ 0.09
SAMM50-205ENST00000493621 KIAA0100Q14667 2235 aaKnown RBP15.58■□□□□ 0.08
SAMM50-205ENST00000493621 CRKP46108 304 aa15.58■□□□□ 0.08
SAMM50-205ENST00000493621 SP3Q02447 781 aa15.58■□□□□ 0.08
SAMM50-205ENST00000493621 CNKSR2Q8WXI2 1034 aa15.58■□□□□ 0.08
SAMM50-205ENST00000493621 TEPSINQ96N21 525 aa15.58■□□□□ 0.08
SAMM50-205ENST00000493621 TMEM39BQ9GZU3 492 aa15.58■□□□□ 0.08
SAMM50-205ENST00000493621 IQSEC3Q9UPP2 1182 aaPredicted RBP15.58■□□□□ 0.08
SAMM50-205ENST00000493621 CENPFP49454 3210 aa15.57■□□□□ 0.08
SAMM50-205ENST00000493621 TNNI2P48788 182 aa15.57■□□□□ 0.08
SAMM50-205ENST00000493621 CAP1Q01518 475 aa15.57■□□□□ 0.08
SAMM50-205ENST00000493621 GRIK5Q16478 980 aa15.57■□□□□ 0.08
SAMM50-205ENST00000493621 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.57■□□□□ 0.08
SAMM50-205ENST00000493621 KAZALD1Q96I82 304 aa15.57■□□□□ 0.08
SAMM50-205ENST00000493621 MS4A4AQ96JQ5 239 aa15.57■□□□□ 0.08
SAMM50-205ENST00000493621 NBPF7P0C2Y1 421 aaPredicted RBP15.56■□□□□ 0.08
SAMM50-205ENST00000493621 CHAF1AQ13111 956 aaPredicted RBP15.56■□□□□ 0.08
SAMM50-205ENST00000493621 VGLL4Q14135 290 aa15.56■□□□□ 0.08
SAMM50-205ENST00000493621 VPS37DQ86XT2 251 aa15.56■□□□□ 0.08
SAMM50-205ENST00000493621 BRI3BPQ8WY22 251 aa15.56■□□□□ 0.08
SAMM50-205ENST00000493621 RIPOR2Q9Y4F9 1068 aa15.56■□□□□ 0.08
SAMM50-205ENST00000493621 MROH5Q6ZUA9 1318 aa15.56■□□□□ 0.08
SAMM50-205ENST00000493621 CCL15-CCL14A0A0B4J2E2 113 aa15.55■□□□□ 0.08
SAMM50-205ENST00000493621 ANP32CO43423 234 aa15.55■□□□□ 0.08
SAMM50-205ENST00000493621 FRAT2O75474 233 aaPredicted RBP15.55■□□□□ 0.08
SAMM50-205ENST00000493621 MAP3K9P80192 1104 aa15.55■□□□□ 0.08
SAMM50-205ENST00000493621 TAF1CQ15572 869 aaPredicted RBP15.55■□□□□ 0.08
SAMM50-205ENST00000493621 CCL15Q16663 113 aa15.55■□□□□ 0.08
SAMM50-205ENST00000493621 FBXO33Q7Z6M2 555 aa15.55■□□□□ 0.08
SAMM50-205ENST00000493621 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.55■□□□□ 0.08
SAMM50-205ENST00000493621 ARMC5Q96C12 935 aa15.55■□□□□ 0.08
SAMM50-205ENST00000493621 GCC1Q96CN9 775 aa15.55■□□□□ 0.08
SAMM50-205ENST00000493621 OTUD5Q96G74 571 aa15.55■□□□□ 0.08
SAMM50-205ENST00000493621 BICC1Q9H694 974 aaKnown RBP15.55■□□□□ 0.08
SAMM50-205ENST00000493621 CSADQ9Y600 493 aa15.55■□□□□ 0.08
SAMM50-205ENST00000493621 MYH13Q9UKX3 1938 aa15.55■□□□□ 0.08
SAMM50-205ENST00000493621 MKI67P46013 3256 aaKnown RBP15.54■□□□□ 0.08
SAMM50-205ENST00000493621 EN2P19622 333 aaPredicted RBP15.54■□□□□ 0.08
SAMM50-205ENST00000493621 GTF2A2P52657 109 aa15.54■□□□□ 0.08
SAMM50-205ENST00000493621 CACNB3P54284 484 aa15.54■□□□□ 0.08
SAMM50-205ENST00000493621 LRRC24Q50LG9 513 aa15.54■□□□□ 0.08
SAMM50-205ENST00000493621 METTL24Q5JXM2 366 aa15.54■□□□□ 0.08
SAMM50-205ENST00000493621 ZFYVE28Q9HCC9 887 aa15.54■□□□□ 0.08
SAMM50-205ENST00000493621 ZSWIM8A7E2V4 1837 aa15.54■□□□□ 0.08
SAMM50-205ENST00000493621 UTYO14607 1347 aa15.53■□□□□ 0.08
SAMM50-205ENST00000493621 CAVIN4Q5BKX8 364 aa15.53■□□□□ 0.08
SAMM50-205ENST00000493621 FAM43AQ8N2R8 423 aa15.53■□□□□ 0.08
SAMM50-205ENST00000493621 TBC1D22AQ8WUA7 517 aa15.53■□□□□ 0.08
SAMM50-205ENST00000493621 TEKT1Q969V4 418 aa15.53■□□□□ 0.08
SAMM50-205ENST00000493621 HDLBPQ00341 1268 aaKnown RBP15.52■□□□□ 0.08
SAMM50-205ENST00000493621 ARHGEF6Q15052 776 aa15.52■□□□□ 0.08
SAMM50-205ENST00000493621 RABL6Q3YEC7 729 aaPredicted RBP15.52■□□□□ 0.08
SAMM50-205ENST00000493621 ANKRD44Q8N8A2 993 aa15.52■□□□□ 0.08
SAMM50-205ENST00000493621 PTCH2Q9Y6C5 1203 aa15.52■□□□□ 0.08
SAMM50-205ENST00000493621 AK9Q5TCS8 1911 aa15.52■□□□□ 0.07
SAMM50-205ENST00000493621 SPDYE5A6NIY4 337 aa15.51■□□□□ 0.07
SAMM50-205ENST00000493621 PDE8BO95263 885 aa15.51■□□□□ 0.07
SAMM50-205ENST00000493621 BCAMP50895 628 aa15.51■□□□□ 0.07
SAMM50-205ENST00000493621 FAM9BQ8IZU0 186 aa15.51■□□□□ 0.07
SAMM50-205ENST00000493621 VGLL2Q8N8G2 317 aa15.51■□□□□ 0.07
SAMM50-205ENST00000493621 ZNF333Q96JL9 665 aa15.51■□□□□ 0.07
SAMM50-205ENST00000493621 TMEM106CQ9BVX2 250 aa15.51■□□□□ 0.07
SAMM50-205ENST00000493621 TMOD2Q9NZR1 351 aa15.51■□□□□ 0.07
SAMM50-205ENST00000493621 SNCAIPQ9Y6H5 919 aa15.51■□□□□ 0.07
SAMM50-205ENST00000493621 SLC9C1Q4G0N8 1177 aa15.5■□□□□ 0.07
SAMM50-205ENST00000493621 HABP4Q5JVS0 413 aaKnown RBP15.5■□□□□ 0.07
SAMM50-205ENST00000493621 KLHDC4Q8TBB5 520 aa15.5■□□□□ 0.07
SAMM50-205ENST00000493621 ZKSCAN4Q969J2 545 aaPredicted RBP15.5■□□□□ 0.07
SAMM50-205ENST00000493621 ZDHHC15Q96MV8 337 aa15.5■□□□□ 0.07
SAMM50-205ENST00000493621 WRNIP1Q96S55 665 aa15.5■□□□□ 0.07
SAMM50-205ENST00000493621 WDHD1O75717 1129 aaPredicted RBP15.49■□□□□ 0.07
SAMM50-205ENST00000493621 CETPP11597 493 aa15.49■□□□□ 0.07
SAMM50-205ENST00000493621 NBPF11Q86T75 865 aa15.49■□□□□ 0.07
SAMM50-205ENST00000493621 FAM83AQ86UY5 434 aa15.49■□□□□ 0.07
SAMM50-205ENST00000493621 ERO1BQ86YB8 467 aa15.49■□□□□ 0.07
SAMM50-205ENST00000493621 MRPL50Q8N5N7 158 aaKnown RBP15.49■□□□□ 0.07
SAMM50-205ENST00000493621 BRCA2P51587 3418 aa15.49■□□□□ 0.07
SAMM50-205ENST00000493621 MAST3O60307 1309 aa15.48■□□□□ 0.07
SAMM50-205ENST00000493621 BTBD19C9JJ37 291 aa15.48■□□□□ 0.07
SAMM50-205ENST00000493621 IRF6O14896 467 aa15.48■□□□□ 0.07
SAMM50-205ENST00000493621 MYCP01106 439 aaPredicted RBP15.48■□□□□ 0.07
SAMM50-205ENST00000493621 SNAPC2Q13487 334 aa15.48■□□□□ 0.07
SAMM50-205ENST00000493621 SLC4A8Q2Y0W8 1093 aa15.48■□□□□ 0.07
SAMM50-205ENST00000493621 APOBEC3HQ6NTF7 200 aaKnown RBP15.48■□□□□ 0.07
SAMM50-205ENST00000493621 HOOK2Q96ED9 719 aa15.48■□□□□ 0.07
SAMM50-205ENST00000493621 MRIQ9BWK5 157 aa15.48■□□□□ 0.07
SAMM50-205ENST00000493621 ARHGAP39Q9C0H5 1083 aa15.48■□□□□ 0.07
SAMM50-205ENST00000493621 TLR2O60603 784 aa15.47■□□□□ 0.07
SAMM50-205ENST00000493621 IFIT1P09914 478 aaKnown RBP15.47■□□□□ 0.07
SAMM50-205ENST00000493621 PPIL2Q13356 520 aa15.47■□□□□ 0.07
SAMM50-205ENST00000493621 KIF22Q14807 665 aa15.47■□□□□ 0.07
SAMM50-205ENST00000493621 PUM3Q15397 648 aaKnown RBP15.47■□□□□ 0.07
SAMM50-205ENST00000493621 FKBP1CQ5VVH2 108 aa15.47■□□□□ 0.07
SAMM50-205ENST00000493621 DCAF15Q66K64 600 aa15.47■□□□□ 0.07
SAMM50-205ENST00000493621 SUGT1Q9Y2Z0 365 aa15.47■□□□□ 0.07
SAMM50-205ENST00000493621 PTPRCP08575 1304 aa15.46■□□□□ 0.07
SAMM50-205ENST00000493621 ECM2O94769 699 aaPredicted RBP15.46■□□□□ 0.07
SAMM50-205ENST00000493621 FGFR2P21802 821 aa15.46■□□□□ 0.07
SAMM50-205ENST00000493621 LACTBP83111 547 aaPredicted RBP15.46■□□□□ 0.07
SAMM50-205ENST00000493621 HHIPL2Q6UWX4 724 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms